MDP0000262752, MDP0000262752 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000262752
Unique Name	MDP0000262752
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	5375

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr7	chromosome	chr7:22617976..22623350 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC005672.143	contig	MDC005672.143:58448..63822 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23
KEGG/KAAS of Malus x domestica Whole Genome v1.0	2012-04-02

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000262752_exon_1	MDP0000262752_exon_1	Malus x domestica	CDS
MDP0000262752_exon_2	MDP0000262752_exon_2	Malus x domestica	CDS
MDP0000262752_exon_3	MDP0000262752_exon_3	Malus x domestica	CDS
MDP0000262752_exon_4	MDP0000262752_exon_4	Malus x domestica	CDS
MDP0000262752_exon_5	MDP0000262752_exon_5	Malus x domestica	CDS
MDP0000262752_exon_6	MDP0000262752_exon_6	Malus x domestica	CDS
MDP0000262752_exon_7	MDP0000262752_exon_7	Malus x domestica	CDS
MDP0000262752_exon_8	MDP0000262752_exon_8	Malus x domestica	CDS
MDP0000262752_exon_9	MDP0000262752_exon_9	Malus x domestica	CDS
MDP0000262752_exon_10	MDP0000262752_exon_10	Malus x domestica	CDS
MDP0000262752_exon_11	MDP0000262752_exon_11	Malus x domestica	CDS
MDP0000262752_exon_12	MDP0000262752_exon_12	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000262752	MDP0000262752	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000589	Ribosomal protein S15	PFAM	PF00312	Ribosomal_S15	coord: 66..125 score: 1.5
IPR009068	S15/NS1, RNA-binding	SUPERFAMILY	47060	S15/NS1 RNA-binding domain	coord: 65..125 score: 4.1
IPR012606	Ribosomal protein S13/S15, N-terminal	PFAM	PF08069	Ribosomal_S13_N	coord: 1..60 score: 1.2
None	No IPR available	PANTHER	PTHR11885	FAMILY NOT NAMED	coord: 1..126 score: 1.3e
None	No IPR available	PFAM	PF03517	ICln_channel	coord: 214..341 score: 7.8
None	No IPR available	SEG	seg	seg	coord: 124..149 score: NAcoord: 285..300 score: NAcoord: 334..346 score
None	No IPR available	SEG	seg	seg	coord: 11..25 score
None	No IPR available	SEG	seg	seg	coord: 21..32 score
None	No IPR available	SEG	seg	seg	coord: 9..24 score: NAcoord: 55..70 score
None	No IPR available	SEG	seg	seg	coord: 17..30 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr7:22617976..22623350-
mRNA from alignment at MDC005672.143:58448..63822-
coding sequence from alignment at MDC005672.143:58448..63822-

mRNA sequence

>MDP0000262752 ID=MDP0000262752; Name=MDP0000262752; organism=Malus x domestica; type=mRNA; length=5375bp
ATGGGTCGCATGCACAGTCATGGGTGCGCCTCCTCCTCCCTTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTATAGAAGT
ATTCGATTTCTTATCTGTTTTGGGGTTTTGCAGAAAGGGAATGTCAGCCT
CAGCGCTGCCGTACAAGAGGAGTGCGCCGAGCTGGCTGAAGGTCACTGCT
CCAGATGTAAGTAAATCAAAAACCCAAAATTTATATGTAATTATCGATGC
TAATTGAGGCGATTATATATATGATTAAGGTGGAGGAGAACATCTGCAAG
TTTGCAAAGAAGGGTATGACTCCGTCTCAGATCGGTGTCATTCTCCGTGA
CTCTCACGGCATTGCGCAGGTTAAGACCGTTACTGGAAGCAAGATCCTGC
GTGTTCTCAAGGCTTACGGTATATGCCTCTTTTTGGGTGTAATTTTAATA
TTATGAATTGTATTGCACTGTTTAGTGTCTTTGGGAATTATATTAGAAAT
GTTTGGATGTGTAGTGGGAATTGTGGGATTGAAACCCATTATTCTAATTA
GCCAAATTACGTAGGTGAAGTGAGTAAGCACTGATTGATTGCTTGATATG
CTTTTGCGGATTTTGAACATGGGATTCAAACCCAATTTTGGTTTTAGGAT
TAGGCTAGCTCAATGTGAAGAGGTTTTCTCTTCCATTTTTCATGTTCTGT
GAAAATATGAAGAAGATTAGGAGTTCTTTATGATTATCAAACAGGCCTGT
GGTATTGTGTCTTTCAGTTTGCTTCGCACTGACGAAATAATAGCCTACTT
ATGTAGATGATACGTAATATTGTTTACTGTTGGTTAGGTCTTGCTCCTGA
AATTCCTGAGGATCTGTACCATCTTATCAAGAAGGCAGTTTCAATTAGGA
AGCATTTGGAGAGGAATAGGAAGGACAAGGATTCCAAGTTTCGGTTGATT
TTGGTGGAGAGCAGGATCCACAGGCTTTCTCGTTACTACAAGAAAACTAA
GAAGCTTCCACCCGTCTGGAAATAGTAAGCATTCTTACTCTGTTTCCAAC
GTATAAATTTCTATGTTTCATTCTAGTATGTTGGTATCATTCCTAACGCC
TTGTTGGTATCATTCCTAGCGGCTTGTTACAACTCCTGGTTTCTAGGCCT
TGTAGTGTTGGACAAACAGGGCTCTTTGCTTATCAACTGCCAGAGTTATA
TCTAGTCATAACATGTATCGAAGCCCCCTCGCCTAGAAAGATTTTATCTT
AATGTTTAAGATGTATTTGATATTTCTTAGCATCACAAGAATAATTTTAT
CATTCCCTATCTTTGCAAAAACGGATGCATAATTGAAGTACCCAATACAT
ATTGTTTCTTCTTTGCATATCTGCCAGCCGACGTTTAGAGTTTATTGTCT
GCAGTTTTGTTTTCTGTTTCTATACAACAATTTACGAGTTCTCTTTTGTT
TTACAGCGAGTCAACCACTGCCAGCACTCTTGTTGCTTAGGTTGGTTTTG
CAACTTGCTACCGCTGTGCGATTAGCTTGGGTTGATGAGGTATACTTGGG
AAAGCCAAAAAGGAAGATGGTGGTATTGTGTGTCTCCATGTTTCGAACTT
GTAGACCCTTTAGCTATTGAAAATTTTGGTATTCATACATGTAAGGAAAG
AGAATCCTAGGGCCTTATGTTTCGGCATTGCATGTTTTATTTGAGATTGA
TGTTTTCGAGAGTTATATTTAGCATTGCAATTTATCGTGCTTACATTTGC
AAGCCTTGATGTTACTTTTTGCAAGAATGAAACTGCGCTCGTTATGTTAG
CTGAAAACAGAGATGGCCACAATGCTTACTTGCTTAAGGTCGAAACCATC
CATCGTCTGCACTTCTTGAACGAACCTAACTTAAGTCAGAGATTCTTAGC
TATACCTGTTTCAACACCGGGGACCATAAAATCGATTACAACTGATTACA
AGGCAAATTCTCTCCAACTTGCTCAACTCTGCCTCAAATTGTAGAGTAAT
GCTATTCTTATCACAATTTTATATCTTTAATGCATATGAGTTGGACAAGT
TACATCATTTAATTTCAATTATCTTATTAATTAAAACACTTTAATAAGGA
AAATTGCAGACTTCAAGATCTCCCTCTGGCGTTATTAGCTTAATTGGGTA
TGAACCCTAATCCAATAGACAAATTTGATTTTGACTCCTAATTCGCAGGA
AAGCTAATACACATTACTTAATGAAATAATCAGCTGAAATCCTTCTTTTA
AACCACAAAAAAAATTATTTTGAAAAGAAAAAAAAWTCATGAGATGAACA
ACCATAGAGTACCAATGAAGATTGGAGATAGAAATACTTGAATGCGAATG
AGGATTGGGGCTACAAGGATGGAGGATTGGGGATATAGGGCATGAGTCTG
GAGATAGAAATCAATGGTGATTATGGTATACGAGTAAATTCTATAAAGCT
TGACCATGAAAATGAAAGGGGAAGGAAGAAGCATAATGGAGAGAGGAAGG
AAGAATGAGACTCCTCGTATGCCACAATTATCATTTAATTAATAATTTTT
TTTATTAATTATTGATTAACATTTTGAAATTAAATGTTAATTAATTTAGA
TGATGTGGTTGTCCACATCAGATGTCACATAAAATGGTATACAATTATAA
TACAAAAACATGGTAAGAATAACATTAGTAACATAATTTTTAAATGTCAG
AAATAAAACCGCAATTAGTTTTTGTGGTGGTACGTTAAGTTGGACCACAT
AGCTAGAGTGGATGTGGTCTCCTATACATCCGAGTTCGTATTTACTTATG
CTAAGTGGATTAGTTCAAATAAAATATAATTACATTAAAATAAAAAGAGA
CCGGCATTATTAAAAAGAAAAAACAAAAAAAAATAGTTTGGGCTGAGATA
AGTAGTAGCCCGAGCCGGTTTCAACGGTTCAACACCCCAACTTGAACCCA
AAAGCCCACACCGCTTAAAAAATGGCGGTTCTTCTTTTTTGGGCTGAAAA
AAAGAAAAGAAAAGAAAATGGCGGTTTAAACCCCTGAAGGAAAAGAAACA
AACAATTAGTAAAACCCTAGAAAACCAAAGAAGGCGAAGTCAGTGTCTCT
TCTCTTCCCCAGTGCTTGCACGTTTTGTAGCAGATAGAAGAGAAAGAAGA
AGAACCCAGGTACCAAATCCTGCTCACCCTTTTTTTCTATTGAATTGCAT
CTTCCTCTATATTTTTCTGCTTAATTTATCTTCTTTATTTTTTCTCCTGT
AAATCGGTTTGTATTGCCGTTCATCGTCAGATTATTTGACAAATTTTCGA
CCGTTGGCGTTCGATAACTTTATCGATATTCTTCTGCTTGAGCTAGTCGT
TTGTTTCCTGAGAAAATTGTTGGAAAATATAAGAATTAAATTACCCCTTT
TTACCTGGCTTGGCCCTCACATTTAATTGGTTAACTTACAATGTTCATGT
AGGTTGCAAATTAGTTTGTTTAAGTGAATTATTGACTCTTAAGTGTTTGT
GTGTGTGTATATATATATATATATATATGTATATGTATGACAGTTTATTT
GAGCAATTTTGTGACCGTGGGTTGTCTATAAACATCAAATTTTGTTTTGA
AAAAGAAAAGGAAGAGACCCGAGTCAGCGAGCAGAATGGTGGCAGGGCTT
AAAGAATTCACTGCAAGAGTTGAAAGAAACGGTGTTTATGAACCAGTTCT
GGATGCGGAGAACGGTGAGGAGCTGATGCGCGTTCAGCCTGGTGTTTCTA
TTGTCCTCGGTAATCGACCCCCTGAGTCCCCGGGCACCCTCTACATCTCC
ACCAAGTACGCCGTGCTCTCTCGTGATGTTATTTATTTATTTATGTTTAG
GTGAATTTCAGGGGATGGAATTGCTMGAGTAAARAAAAACAATATTTGAA
GGGACTTGTAAACATTTTTATCCTTTACAAAATTAGAATCCAATCGAGCA
TTTGGCTTTGATTTTGATTTTGCAGGCAAGTGGTTTGGTTGAGTGACGTT
GATAGGGAGAAGGGTTATGCTGTGGACTTCTTGTCTATATCACTGCACGC
TGTGTCCAGAGACCCGGAGGCCTACACCTCTCCTTGTATTTACACTCAGG
TATATGCTTTCTTCGTTATTGCACTCCCGCAGCAATTTGGGGTTGGTTAT
CTTGTCCGACATGTACTTCGTCGAAACTGTTTTATTGTGTGGTGTGAACT
TAACTTTGTAAGGCAATTTTGTGCTCTTCTCTGGATATAGTAGTGGCACC
TTTTAGTATATATCTATTGTACACAGTATAAAGGCGAGCAGCCCTTATAG
CAATAGCAAACGGCCTACTAATAGCCCTCTTTTTTCCCCCGGAAAATATA
GTTTTTTTTTCCGGGTGTCTCAGAGCGTGGTGAACATAGGTTCTGACAGT
AACTACGGTGTTTTTGGCGAATCACTTGCTTATTTTTGTATCCAGGGTTT
GTGTGTCTTTATCATATGGTCAAAGTCTCGGACTAATCTTTAACGTCAAT
ATGTTATTTCAAAGTTTTTGGCCTTTTTGTGCACCGTATCTCTGATTAGA
GTTTTTAACTTTATAGATTGAAACTGAGGATGACGAGGACGAGTCTGACG
GTTCCGATTCAGAATCCAATGGTGTCTTAGATTTATCCAAGATCACAGAA
ATGAGACTTGTTCCTTCAGATCCTAACCAATGTATATATATCTCTCTCCC
TCTGTACTTTGTTGAATTTTCTTGTTAGAATTTTTCTGGTGAAGAGTAAC
TAGCTTGTTATTTATTGTGTGGCAGTGGATTCTCTGTTTGAGGTGTTTTG
CGAGTGTGCAGAGCTTAATCCTGAACCAATTGAAGGTAGTACGATTTCTT
CATACCCTGGTTATTTTCTTTTACATTTTTGTTTTTGTGAATGATATTTG
TTATGTTTGATTCATGAGTTGTGCCCTGATAGTATAATTTTGATCTGCCT
TTCCTTAGAAGGGGAAGAAGAGCATAACTGGATTTTTAGTGCCGATCAAT
TGGAAGACGAGGCAGTTGGTATGTGATGCACCATGGAACATTTATATCGT
CATGTATCAATACGTGTAAAAATAAATATGAAATCTTCTATCATCTATGA
CGTCTTTGTTTTGAATGTGGCGGTATTTTCAGGGGACGATTCTGAGTGGC
CTGTTCCTCAAAATCTTTCAAACCCAATTGGTCAATCGAACGGGGATCAT
GACCTAGCTCGTACTGTGCTTGAGGTAAGCCTGTGAATATCCACTTAATG
CTTGCTGTGGAGTTGGCATATTTGTATTGATCACGTTTACATCTTCTTTG
CAGCTTCAGATCAACGATCAGCGCTTTGAGGATGCCGAAGAAATGGAGCA
TGAGAGCGACAGTGATCGCCATTAA

protein sequence of MDP0000262752

>MDP0000262752 ID=MDP0000262752; Name=MDP0000262752; organism=Malus x domestica; type=polypeptide; length=415bp
MGRMHSHGKGMSASALPYKRSAPSWLKVTAPDVEENICKFAKKGMTPSQI
GVILRDSHGIAQVKTVTGSKILRVLKAYGLAPEIPEDLYHLIKKAVSIRK
HLERNRKDKDSKFRLILVESRIHRLSPSQPLPALLLLRLVLQLATAVRLA
WVDEKRKRPESASRMVAGLKEFTARVERNGVYEPVLDAENGEELMRVQPG
VSIVLGNRPPESPGTLYISTKQVVWLSDVDREKGYAVDFLSISLHAVSRD
PEAYTSPCIYTQVYAFFVIALPQQFGVGYLVRHIETEDDEDESDGSDSES
NGVLDLSKITEMRLVPSDPNQLDSLFEVFCECAELNPEPIEEGEEEHNWI
FSADQLEDEAVGDDSEWPVPQNLSNPIGQSNGDHDLARTVLELQINDQRF
EDAEEMEHESDSDRH

mRNA from alignment at chr7:22617976..22623350-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000262752 ID=MDP0000262752; Name=MDP0000262752; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr7:22617976..22623350- (Malus x domestica

mRNA from alignment at MDC005672.143:58448..63822-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000262752 ID=MDP0000262752; Name=MDP0000262752; organism=Malus x domestica; type=mRNA; length=5375bp; location=Sequence derived from: MDC005672.143:58448..63822- (Malus x domestica
ATGGGTCGCATGCACAGTCATGGGTGCGCCTCCTCCTCCCTTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTATAGAAGT
ATTCGATTTCTTATCTGTTTTGGGGTTTTGCAGAAAGGGAATGTCAGCCT
CAGCGCTGCCGTACAAGAGGAGTGCGCCGAGCTGGCTGAAGGTCACTGCT
CCAGATGTAAGTAAATCAAAAACCCAAAATTTATATGTAATTATCGATGC
TAATTGAGGCGATTATATATATGATTAAGGTGGAGGAGAACATCTGCAAG
TTTGCAAAGAAGGGTATGACTCCGTCTCAGATCGGTGTCATTCTCCGTGA
CTCTCACGGCATTGCGCAGGTTAAGACCGTTACTGGAAGCAAGATCCTGC
GTGTTCTCAAGGCTTACGGTATATGCCTCTTTTTGGGTGTAATTTTAATA
TTATGAATTGTATTGCACTGTTTAGTGTCTTTGGGAATTATATTAGAAAT
GTTTGGATGTGTAGTGGGAATTGTGGGATTGAAACCCATTATTCTAATTA
GCCAAATTACGTAGGTGAAGTGAGTAAGCACTGATTGATTGCTTGATATG
CTTTTGCGGATTTTGAACATGGGATTCAAACCCAATTTTGGTTTTAGGAT
TAGGCTAGCTCAATGTGAAGAGGTTTTCTCTTCCATTTTTCATGTTCTGT
GAAAATATGAAGAAGATTAGGAGTTCTTTATGATTATCAAACAGGCCTGT
GGTATTGTGTCTTTCAGTTTGCTTCGCACTGACGAAATAATAGCCTACTT
ATGTAGATGATACGTAATATTGTTTACTGTTGGTTAGGTCTTGCTCCTGA
AATTCCTGAGGATCTGTACCATCTTATCAAGAAGGCAGTTTCAATTAGGA
AGCATTTGGAGAGGAATAGGAAGGACAAGGATTCCAAGTTTCGGTTGATT
TTGGTGGAGAGCAGGATCCACAGGCTTTCTCGTTACTACAAGAAAACTAA
GAAGCTTCCACCCGTCTGGAAATAGTAAGCATTCTTACTCTGTTTCCAAC
GTATAAATTTCTATGTTTCATTCTAGTATGTTGGTATCATTCCTAACGCC
TTGTTGGTATCATTCCTAGCGGCTTGTTACAACTCCTGGTTTCTAGGCCT
TGTAGTGTTGGACAAACAGGGCTCTTTGCTTATCAACTGCCAGAGTTATA
TCTAGTCATAACATGTATCGAAGCCCCCTCGCCTAGAAAGATTTTATCTT
AATGTTTAAGATGTATTTGATATTTCTTAGCATCACAAGAATAATTTTAT
CATTCCCTATCTTTGCAAAAACGGATGCATAATTGAAGTACCCAATACAT
ATTGTTTCTTCTTTGCATATCTGCCAGCCGACGTTTAGAGTTTATTGTCT
GCAGTTTTGTTTTCTGTTTCTATACAACAATTTACGAGTTCTCTTTTGTT
TTACAGCGAGTCAACCACTGCCAGCACTCTTGTTGCTTAGGTTGGTTTTG
CAACTTGCTACCGCTGTGCGATTAGCTTGGGTTGATGAGGTATACTTGGG
AAAGCCAAAAAGGAAGATGGTGGTATTGTGTGTCTCCATGTTTCGAACTT
GTAGACCCTTTAGCTATTGAAAATTTTGGTATTCATACATGTAAGGAAAG
AGAATCCTAGGGCCTTATGTTTCGGCATTGCATGTTTTATTTGAGATTGA
TGTTTTCGAGAGTTATATTTAGCATTGCAATTTATCGTGCTTACATTTGC
AAGCCTTGATGTTACTTTTTGCAAGAATGAAACTGCGCTCGTTATGTTAG
CTGAAAACAGAGATGGCCACAATGCTTACTTGCTTAAGGTCGAAACCATC
CATCGTCTGCACTTCTTGAACGAACCTAACTTAAGTCAGAGATTCTTAGC
TATACCTGTTTCAACACCGGGGACCATAAAATCGATTACAACTGATTACA
AGGCAAATTCTCTCCAACTTGCTCAACTCTGCCTCAAATTGTAGAGTAAT
GCTATTCTTATCACAATTTTATATCTTTAATGCATATGAGTTGGACAAGT
TACATCATTTAATTTCAATTATCTTATTAATTAAAACACTTTAATAAGGA
AAATTGCAGACTTCAAGATCTCCCTCTGGCGTTATTAGCTTAATTGGGTA
TGAACCCTAATCCAATAGACAAATTTGATTTTGACTCCTAATTCGCAGGA
AAGCTAATACACATTACTTAATGAAATAATCAGCTGAAATCCTTCTTTTA
AACCACAAAAAAAATTATTTTGAAAAGAAAAAAAAWTCATGAGATGAACA
ACCATAGAGTACCAATGAAGATTGGAGATAGAAATACTTGAATGCGAATG
AGGATTGGGGCTACAAGGATGGAGGATTGGGGATATAGGGCATGAGTCTG
GAGATAGAAATCAATGGTGATTATGGTATACGAGTAAATTCTATAAAGCT
TGACCATGAAAATGAAAGGGGAAGGAAGAAGCATAATGGAGAGAGGAAGG
AAGAATGAGACTCCTCGTATGCCACAATTATCATTTAATTAATAATTTTT
TTTATTAATTATTGATTAACATTTTGAAATTAAATGTTAATTAATTTAGA
TGATGTGGTTGTCCACATCAGATGTCACATAAAATGGTATACAATTATAA
TACAAAAACATGGTAAGAATAACATTAGTAACATAATTTTTAAATGTCAG
AAATAAAACCGCAATTAGTTTTTGTGGTGGTACGTTAAGTTGGACCACAT
AGCTAGAGTGGATGTGGTCTCCTATACATCCGAGTTCGTATTTACTTATG
CTAAGTGGATTAGTTCAAATAAAATATAATTACATTAAAATAAAAAGAGA
CCGGCATTATTAAAAAGAAAAAACAAAAAAAAATAGTTTGGGCTGAGATA
AGTAGTAGCCCGAGCCGGTTTCAACGGTTCAACACCCCAACTTGAACCCA
AAAGCCCACACCGCTTAAAAAATGGCGGTTCTTCTTTTTTGGGCTGAAAA
AAAGAAAAGAAAAGAAAATGGCGGTTTAAACCCCTGAAGGAAAAGAAACA
AACAATTAGTAAAACCCTAGAAAACCAAAGAAGGCGAAGTCAGTGTCTCT
TCTCTTCCCCAGTGCTTGCACGTTTTGTAGCAGATAGAAGAGAAAGAAGA
AGAACCCAGGTACCAAATCCTGCTCACCCTTTTTTTCTATTGAATTGCAT
CTTCCTCTATATTTTTCTGCTTAATTTATCTTCTTTATTTTTTCTCCTGT
AAATCGGTTTGTATTGCCGTTCATCGTCAGATTATTTGACAAATTTTCGA
CCGTTGGCGTTCGATAACTTTATCGATATTCTTCTGCTTGAGCTAGTCGT
TTGTTTCCTGAGAAAATTGTTGGAAAATATAAGAATTAAATTACCCCTTT
TTACCTGGCTTGGCCCTCACATTTAATTGGTTAACTTACAATGTTCATGT
AGGTTGCAAATTAGTTTGTTTAAGTGAATTATTGACTCTTAAGTGTTTGT
GTGTGTGTATATATATATATATATATATGTATATGTATGACAGTTTATTT
GAGCAATTTTGTGACCGTGGGTTGTCTATAAACATCAAATTTTGTTTTGA
AAAAGAAAAGGAAGAGACCCGAGTCAGCGAGCAGAATGGTGGCAGGGCTT
AAAGAATTCACTGCAAGAGTTGAAAGAAACGGTGTTTATGAACCAGTTCT
GGATGCGGAGAACGGTGAGGAGCTGATGCGCGTTCAGCCTGGTGTTTCTA
TTGTCCTCGGTAATCGACCCCCTGAGTCCCCGGGCACCCTCTACATCTCC
ACCAAGTACGCCGTGCTCTCTCGTGATGTTATTTATTTATTTATGTTTAG
GTGAATTTCAGGGGATGGAATTGCTMGAGTAAARAAAAACAATATTTGAA
GGGACTTGTAAACATTTTTATCCTTTACAAAATTAGAATCCAATCGAGCA
TTTGGCTTTGATTTTGATTTTGCAGGCAAGTGGTTTGGTTGAGTGACGTT
GATAGGGAGAAGGGTTATGCTGTGGACTTCTTGTCTATATCACTGCACGC
TGTGTCCAGAGACCCGGAGGCCTACACCTCTCCTTGTATTTACACTCAGG
TATATGCTTTCTTCGTTATTGCACTCCCGCAGCAATTTGGGGTTGGTTAT
CTTGTCCGACATGTACTTCGTCGAAACTGTTTTATTGTGTGGTGTGAACT
TAACTTTGTAAGGCAATTTTGTGCTCTTCTCTGGATATAGTAGTGGCACC
TTTTAGTATATATCTATTGTACACAGTATAAAGGCGAGCAGCCCTTATAG
CAATAGCAAACGGCCTACTAATAGCCCTCTTTTTTCCCCCGGAAAATATA
GTTTTTTTTTCCGGGTGTCTCAGAGCGTGGTGAACATAGGTTCTGACAGT
AACTACGGTGTTTTTGGCGAATCACTTGCTTATTTTTGTATCCAGGGTTT
GTGTGTCTTTATCATATGGTCAAAGTCTCGGACTAATCTTTAACGTCAAT
ATGTTATTTCAAAGTTTTTGGCCTTTTTGTGCACCGTATCTCTGATTAGA
GTTTTTAACTTTATAGATTGAAACTGAGGATGACGAGGACGAGTCTGACG
GTTCCGATTCAGAATCCAATGGTGTCTTAGATTTATCCAAGATCACAGAA
ATGAGACTTGTTCCTTCAGATCCTAACCAATGTATATATATCTCTCTCCC
TCTGTACTTTGTTGAATTTTCTTGTTAGAATTTTTCTGGTGAAGAGTAAC
TAGCTTGTTATTTATTGTGTGGCAGTGGATTCTCTGTTTGAGGTGTTTTG
CGAGTGTGCAGAGCTTAATCCTGAACCAATTGAAGGTAGTACGATTTCTT
CATACCCTGGTTATTTTCTTTTACATTTTTGTTTTTGTGAATGATATTTG
TTATGTTTGATTCATGAGTTGTGCCCTGATAGTATAATTTTGATCTGCCT
TTCCTTAGAAGGGGAAGAAGAGCATAACTGGATTTTTAGTGCCGATCAAT
TGGAAGACGAGGCAGTTGGTATGTGATGCACCATGGAACATTTATATCGT
CATGTATCAATACGTGTAAAAATAAATATGAAATCTTCTATCATCTATGA
CGTCTTTGTTTTGAATGTGGCGGTATTTTCAGGGGACGATTCTGAGTGGC
CTGTTCCTCAAAATCTTTCAAACCCAATTGGTCAATCGAACGGGGATCAT
GACCTAGCTCGTACTGTGCTTGAGGTAAGCCTGTGAATATCCACTTAATG
CTTGCTGTGGAGTTGGCATATTTGTATTGATCACGTTTACATCTTCTTTG
CAGCTTCAGATCAACGATCAGCGCTTTGAGGATGCCGAAGAAATGGAGCA
TGAGAGCGACAGTGATCGCCATTAA

Coding sequence (CDS) from alignment at MDC005672.143:58448..63822-

>MDP0000262752 ID=MDP0000262752; Name=MDP0000262752; organism=Malus x domestica; type=CDS; length=1248bp; location=Sequence derived from: MDC005672.143:58448..63822- (Malus x domestica
ATGGGTCGCATGCACAGTCATGGAAAGGGAATGTCAGCCTCAGCGCTGCC
GTACAAGAGGAGTGCGCCGAGCTGGCTGAAGGTCACTGCTCCAGATGTGG
AGGAGAACATCTGCAAGTTTGCAAAGAAGGGTATGACTCCGTCTCAGATC
GGTGTCATTCTCCGTGACTCTCACGGCATTGCGCAGGTTAAGACCGTTAC
TGGAAGCAAGATCCTGCGTGTTCTCAAGGCTTACGGTCTTGCTCCTGAAA
TTCCTGAGGATCTGTACCATCTTATCAAGAAGGCAGTTTCAATTAGGAAG
CATTTGGAGAGGAATAGGAAGGACAAGGATTCCAAGTTTCGGTTGATTTT
GGTGGAGAGCAGGATCCACAGGCTTTCTCCGAGTCAACCACTGCCAGCAC
TCTTGTTGCTTAGGTTGGTTTTGCAACTTGCTACCGCTGTGCGATTAGCT
TGGGTTGATGAGAAAAGGAAGAGACCCGAGTCAGCGAGCAGAATGGTGGC
AGGGCTTAAAGAATTCACTGCAAGAGTTGAAAGAAACGGTGTTTATGAAC
CAGTTCTGGATGCGGAGAACGGTGAGGAGCTGATGCGCGTTCAGCCTGGT
GTTTCTATTGTCCTCGGTAATCGACCCCCTGAGTCCCCGGGCACCCTCTA
CATCTCCACCAAGCAAGTGGTTTGGTTGAGTGACGTTGATAGGGAGAAGG
GTTATGCTGTGGACTTCTTGTCTATATCACTGCACGCTGTGTCCAGAGAC
CCGGAGGCCTACACCTCTCCTTGTATTTACACTCAGGTATATGCTTTCTT
CGTTATTGCACTCCCGCAGCAATTTGGGGTTGGTTATCTTGTCCGACATA
TTGAAACTGAGGATGACGAGGACGAGTCTGACGGTTCCGATTCAGAATCC
AATGGTGTCTTAGATTTATCCAAGATCACAGAAATGAGACTTGTTCCTTC
AGATCCTAACCAATTGGATTCTCTGTTTGAGGTGTTTTGCGAGTGTGCAG
AGCTTAATCCTGAACCAATTGAAGAAGGGGAAGAAGAGCATAACTGGATT
TTTAGTGCCGATCAATTGGAAGACGAGGCAGTTGGGGACGATTCTGAGTG
GCCTGTTCCTCAAAATCTTTCAAACCCAATTGGTCAATCGAACGGGGATC
ATGACCTAGCTCGTACTGTGCTTGAGCTTCAGATCAACGATCAGCGCTTT
GAGGATGCCGAAGAAATGGAGCATGAGAGCGACAGTGATCGCCATTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000589	Ribosomal_uS15
IPR009068	uS15_NS1_RNA-bd_sf
IPR012606	Ribosomal_uS15_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation