MDP0000273361, MDP0000273361 (mRNA) Malus spp. (apple)

Transcript Overview
NameMDP0000273361
Unique NameMDP0000273361
TypemRNA
OrganismMalus x domestica (Apple)
Sequence length7939
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MDP0000273361_exon_1MDP0000273361_exon_1Malus x domesticaCDS
MDP0000273361_exon_2MDP0000273361_exon_2Malus x domesticaCDS
MDP0000273361_exon_3MDP0000273361_exon_3Malus x domesticaCDS
MDP0000273361_exon_4MDP0000273361_exon_4Malus x domesticaCDS
MDP0000273361_exon_5MDP0000273361_exon_5Malus x domesticaCDS
MDP0000273361_exon_6MDP0000273361_exon_6Malus x domesticaCDS
MDP0000273361_exon_7MDP0000273361_exon_7Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MDP0000273361MDP0000273361Malus x domesticapolypeptide


Homology
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 282.722 bits (722), Expect = 1.224e-73
Identity = 160/331 (48.34%), Postives = 200/331 (60.42%), Query Frame = 1 
Query:    7 FIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYR-PTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMASVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTG-FKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLA--LSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADD 987
            F+YVL GWEGSA D R+LRDA++R N LKVP G YYLVD GY N +GFLAPYR  RYHL EWR     P+T  EFFNMKH SARNVIER FG+LK RW ILR  SYY ++   R I  CC+LHN I REM    IE + D       + A + I  +E+S+E + WRDNLA+EIM S S +       KH WT  E+  LVE L+EL     WR+  G F+ GYL ++  MM  K+    + AS  I+SRIK +K  + AL E+     SGF WN+EK  +  EK  +D+ +     A GL +K F HY  L  ++ KDR  G  A +  D
Sbjct:  182 FVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSRL------PKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHAST-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWS--HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFAD 503
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|147769233|emb|CAN60760.1| (hypothetical protein VITISV_010914 [Vitis vinifera])

HSP 1 Score: 265.388 bits (677), Expect = 2.023e-68
Identity = 160/402 (39.80%), Postives = 219/402 (54.48%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMASVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLAL-SGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADDDEEEV----RLEDANVNQHEGEDESGNDFDTSFSVPNTQQXRNAENKRSV-----SLLNFPRRSFSGAEKMV 1176
            MQFIYVLPG+                          YYLVD  YTN KGF APYR  RYHLN+WR+ + PTT  EFFNMKHS+ARNVIE CFGLLK+ W ILRSP +Y IKT  +II   C+LHN I REM VDP+E + D Q    +      IT +E  ++   W D+ +       S    GRG+ K  WT +ED  L+E L+EL      +   G K     ++  M+E KL   GL+ASPHIE  +KTLK ++ A+ ++L   SGF W+  K M+ C++  ++   KG KDA+GL  KPFPH+     ++ KDR  G  A +A D  EE+       D  V+  E E ++ +  +T  S P+  +  +   ++ V     +L+N   R+ +  E +V
Sbjct:  143 MQFIYVLPGY--------------------------YYLVDAXYTNGKGFXAPYRGKRYHLNDWREXHMPTTHEEFFNMKHSTARNVIEXCFGLLKLCWAILRSPCFYPIKTQCKIIJAYCLLHNLIKREMPVDPLEQELDVQ---DHQVVGEPITIIEPLNQ---WMDSTS-------SGQIRGRGRNKQVWTPSEDEKLIECLVELCVSGKVKCDNGSKPRAFLQVEKMLEEKLPNSGLRASPHIELXVKTLKKQFNAIMDMLTHGSGFSWDNAKKMVLCDQDVFEGWVKGHKDANGLRLKPFPHFDDRSLVFGKDRANGKGAMSATDILEELDQGEASNDIGVDDLEVETDASHT-NTVASTPSRMECSSQSRRKRVKNDDTTLINVVARTCNALESLV 504
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 256.529 bits (654), Expect = 9.397e-66
Identity = 138/324 (42.59%), Postives = 188/324 (58.02%), Query Frame = 1 
Query:    7 FIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYR-PTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMV-VDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMASVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTG-FKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELL--ALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVG 963
            F+YVL GWEGSA D R+LRDA+++ NGL+VP G YYL D GY N +GFLAPY+  RYHL EWR     PT   E+FNMKHSSARNVIER FG+LK RW ILR  SYY ++   R I  C +LHN I REM   + +E + +G      + A+  I  +E+++E + WRD+LA  +                 W           L+ + G   W++  G F+ GYL ++  MM  KL  C ++A+  I+ RIKTLK  + A+ E+L  A SGF WN+E+  +  EK  +D   +    A GL + PFP+Y  L  ++ +DR  G
Sbjct:  154 FVYVLAGWEGSAADSRILRDAISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFTD--------------WQFRGGDSCGMELVSMGG---WKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATG 460
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|147779878|emb|CAN65842.1| (hypothetical protein VITISV_027369 [Vitis vinifera])

HSP 1 Score: 241.121 bits (614), Expect = 4.085e-61
Identity = 124/209 (59.33%), Postives = 142/209 (67.94%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMASVSSVK-XGRGQQKHYWTTTEDTILVESLLEL 624
            MQFIYVLPGWEGS  D RVLRDAV+RRNGL VP+G YYLVD GYTN KGFLAPYR  RYHLN+WR+G+ PTT  EFFNMKHS+ARNVIERCFGLLK+RW ILRSP +Y IKT  +II  CC++HN I REM VDP+E + D Q                  D    +     +  M S SS +  GRG+ K  WT  ED  LVE L+EL
Sbjct:  211 MQFIYVLPGWEGSTSDSRVLRDAVSRRNGLTVPHGYYYLVDVGYTNGKGFLAPYRGQRYHLNDWREGHMPTTHEEFFNMKHSAARNVIERCFGLLKLRWAILRSPCFYPIKTQCKIILACCLIHNLIKREMXVDPLEQELDVQ------------------DHQVLYNLIFLKHRMNSTSSGQIRGRGRNKRVWTPGEDEKLVECLVEL 401
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|190609947|dbj|BAG49074.1| (30S ribosomal protein S16 [Populus alba])

HSP 1 Score: 234.572 bits (597), Expect = 3.824e-59
Identity = 109/130 (83.85%), Postives = 117/130 (90.00%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTE 1560
            MVVRIRL+RFGC N+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFRAGLLPPPPM+ MGRKGGPRDTRPVDPM+GRF++PEK  +S         TE
Sbjct:    1 MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNASKNDTE 130
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|224118446|ref|XP_002331484.1| (predicted protein [Populus trichocarpa] >gi|222873562|gb|EEF10693.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 233.417 bits (594), Expect = 8.519e-59
Identity = 108/130 (83.08%), Postives = 117/130 (90.00%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTE 1560
            MVVRIRL+RFGC N+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFRAG+LPPPPM+ MGRKGGPRDTRPVDPM+GRF++PEK  +S         TE
Sbjct:    1 MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNASKNDTE 130
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|225444887|ref|XP_002281553.1| (PREDICTED: 30S ribosomal protein S16 [Vitis vinifera] >gi|297738652|emb|CBI27897.3| unnamed protein product [Vitis vinifera])

HSP 1 Score: 231.491 bits (589), Expect = 3.237e-58
Identity = 109/131 (83.21%), Postives = 117/131 (89.31%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTEN 1563
            MVVRIRL+RFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVGAQPSDPVQ+ILFRAGLLPPPPMVAMGRKGG RDTRPVDP++GR +TP KP        D +  E+
Sbjct:    1 MVVRIRLSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVEQPKDDEDGNED 131
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|351727417|ref|NP_001236904.1| (uncharacterized protein LOC100499851 [Glycine max] >gi|255627125|gb|ACU13907.1| unknown [Glycine max])

HSP 1 Score: 225.713 bits (574), Expect = 1.776e-56
Identity = 104/131 (79.39%), Postives = 119/131 (90.84%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTEN 1563
            MVVRIRL+R GCKN+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVGAQPS+PV+R+LFRAG+LPPPPMVAMGRKGGPRDTRPVD ++GR +  EKPA + +  +  ++ EN
Sbjct:    1 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLHQEKPADANNTEQQHDTPEN 131
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|351721257|ref|NP_001238227.1| (uncharacterized protein LOC100305630 [Glycine max] >gi|255626139|gb|ACU13414.1| unknown [Glycine max])

HSP 1 Score: 223.787 bits (569), Expect = 6.750e-56
Identity = 103/131 (78.63%), Postives = 118/131 (90.08%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTEN 1563
            MVVRIRL+R GCKN+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVGAQPS+PV+R+LFRAG+LPPPPMVAMGRKGGPRDTRPVD ++GR +  EK A + +  +  ++ EN
Sbjct:    1 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLNQEKAANANNNEQQHDTPEN 131
[Close]
BLAST of MDP0000273361 vs. NCBI nr
Match: gi|297790240|ref|XP_002863022.1| (ribosomal protein S16 family protein [Arabidopsis lyrata subsp. lyrata] >gi|297793207|ref|XP_002864488.1| ribosomal protein S16 family protein [Arabidopsis lyrata subsp. lyrata] >gi|297308822|gb|EFH39281.1| ribosomal protein S16 family protein [Arabidopsis lyrata subsp. lyrata] >gi|297310323|gb|EFH40747.1| ribosomal protein S16 family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 223.402 bits (568), Expect = 8.816e-56
Identity = 106/132 (80.30%), Postives = 117/132 (88.64%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPE-KPAASGDRGKDAESTEN 1563
            MVVRIRL+RFGCKNRPF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMGL F+R+KYWLSVGAQPSDPVQR+LFR+GLLPPPPMVAMGRKGG RDTRPVDPM+GR+V  E K   + D     E TE+
Sbjct:    1 MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNASDNQPKEEDTED 132
[Close]
BLAST of MDP0000273361 vs. Vitis vinifera
Match: GSVIVT01015186001 (assembled CDS)

HSP 1 Score: 231.491 bits (589), Expect = 7.032e-61
Identity = 109/131 (83.21%), Postives = 117/131 (89.31%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTEN 1563
            MVVRIRL+RFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVGAQPSDPVQ+ILFRAGLLPPPPMVAMGRKGG RDTRPVDP++GR +TP KP        D +  E+
Sbjct:    1 MVVRIRLSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVEQPKDDEDGNED 131
[Close]
BLAST of MDP0000273361 vs. Vitis vinifera
Match: GSVIVT01022336001 (assembled CDS)

HSP 1 Score: 129.413 bits (324), Expect = 3.764e-30
Identity = 80/213 (37.56%), Postives = 115/213 (53.99%), Query Frame = 1 
Query:  553 GRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLAL-SGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADDDEEEVRLEDANVNQHEGEDESGNDFDTSFSVPNTQQXRNAENKRSVSLLNFPRRSFSGAEKMVVRIR 1188
            GRG+ K  WT  ED  L+ESL+EL      +   GF+ G   ++  ++E KL  CGLKASPHIESR+KTLK +Y A+T++L+  SGF W+E+  M+ C    Y+   K  +DA GL  KPFPHY  L +I  KDR       +     +E+  E+   N   G D    + D S + P+T    +A + +  S  +  +RS   A+   V +R
Sbjct:   11 GRGKNKRVWTPKEDAKLIESLVELCVSGKMKCDNGFRPGTFAQVERLLEDKLPGCGLKASPHIESRVKTLKRQYNAITDMLSHGSGFSWDEKNKMIHCHIDVYERWVKDHRDAHGLRLKPFPHYEDLKQILGKDRVCKKEIVSPAGVMKELHQEEV-ANNDVGLDIV--EADVSVAQPST----SASSSKEGSAQSCRKRSREYADLAEVMVR 216
[Close]
BLAST of MDP0000273361 vs. Vitis vinifera
Match: GSVIVT01000536001 (assembled CDS)

HSP 1 Score: 65.4698 bits (158), Expect = 6.674e-11
Identity = 33/97 (34.02%), Postives = 53/97 (54.64%), Query Frame = 1 
Query:  559 GQQKHYWTTTEDTILVESLLELHGDPTWRAXTG-FKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLALSGFEWNEEKMMLACE 846
            G ++  W+  E+  L+E+L EL     W+   G F+ GY   +   ME+K+    LKASPHI+SR+K  K    A+ ++   +G  W+ E  M+ C+
Sbjct:   21 GSKRRQWSEKEEGALIEALHELCR-AGWKTDNGVFRTGYAAALEKAMESKVPGSNLKASPHIDSRLKVFKKHCCAIADMKGAAGIHWDNEDHMVLCD 116
[Close]
BLAST of MDP0000273361 vs. Vitis vinifera
Match: GSVIVT01000025001 (assembled CDS)

HSP 1 Score: 53.9138 bits (128), Expect = 2.010e-7
Identity = 45/200 (22.50%), Postives = 86/200 (43.00%), Query Frame = 1 
Query:  517 QEIMASVSSVKXGRGQQKH------YWTTTEDTILVESLLE--LHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPH-----IESRIKTLKAKYFALTELLALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVG-----ANAGNADDDEEEVRLEDANVNQHEGEDESGNDF 1062
            +++   +  +K G G+ +       YWT   D   ++ LL+  L G+   +       G++ +  + M        +K   H     +++R + L+ +Y  +T LL  SGF W++ + M+  E   +D   +   DA    +K  P+YH L  IY ++   G     A  G+ D  +    +E  ++  +   D S  D+
Sbjct:  314 KDLEYDIVQIKAGEGEYQTPISGDGYWTLPMDHYFIDLLLDQVLRGNKIGQ-------GFITQAWIEMVTLF---NMKFGSHYDKDVLKNRYRHLRRQYNDITALLEHSGFSWDDTREMVTAEGFVWDSYIQAIPDAQSYRNKTVPNYHKLCVIYGQESSNGGDNSLACNGDIDGVDPVWMIEGTDIQCNANSDHSRTDW 503
[Close]
BLAST of MDP0000273361 vs. Vitis vinifera
Match: GSVIVT01028065001 (assembled CDS)

HSP 1 Score: 53.1434 bits (126), Expect = 3.428e-7
Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 1 
Query:  739 IESRIKTLKAKYFALTELLALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIY 942
            +++R KTL+  Y A+  LL   GF W+E++ M+  + + +DE  KG  DA     K  P+Y+ L  IY
Sbjct:   49 LKNRHKTLRNLYKAIKNLLCQRGFSWDEQRQMVTADNNVWDEYIKGHPDARSYRIKTIPYYNDLCFIY 116
[Close]
BLAST of MDP0000273361 vs. Vitis vinifera
Match: GSVIVT01035986001 (assembled CDS)

HSP 1 Score: 52.7582 bits (125), Expect = 4.477e-7
Identity = 42/149 (28.19%), Postives = 63/149 (42.28%), Query Frame = 1 
Query:  538 SSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTGFKNG--YLGKIXVMMEAKLXRCGLKASPH-----IESRIKTLKAKYFALTELLALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVG 963
            S    G  + + YWT   D  L++ LL+       +   G K G  ++ +    M A       K   H     +++R K L+ +Y  +  LL  SGF W+E + M+  E   +D  TK   DA     K  P YH L  IY ++   G
Sbjct:  327 SQTPTGSDRSRTYWTPPMDRYLIDLLLD-------QVHRGNKLGQTFITQAWADMVASFNS---KFRSHHDKDVLKNRFKHLRRQYNDIKILLQQSGFSWDETREMVTAEDHVWDAYTKAHPDARTYRVKTVPSYHKLCVIYGQESSDG 465
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_ROSDO (30S ribosomal protein S16 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rpsP PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.825e-20
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGL 1416
            M ++IRLAR G K RPFYR++AADSR PRDG+ +E LG YNPL  +D  +R+ ++ ERV+YWL  GAQP+D V R+L  AGL
Sbjct:    1 MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDAERVQYWLGQGAQPTDRVARMLEAAGL 82
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_RHIME (30S ribosomal protein S16 OS=Rhizobium meliloti (strain 1021) GN=rpsP PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.521e-19
Identity = 46/86 (53.49%), Postives = 64/86 (74.42%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPP 1428
            M ++IRLAR G K RP+Y+++ AD+RSPRDG+ LE LG +NP+  +D  KR+ LN ERV++W++ GAQP+D V R L +AGL   P
Sbjct:    1 MALKIRLARGGSKKRPYYQIVVADARSPRDGRFLEKLGSWNPMLAKDDEKRIELNAERVQHWIAQGAQPTDRVMRFLDQAGLAKRP 86
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_DINSH (30S ribosomal protein S16 OS=Dinoroseobacter shibae (strain DFL 12) GN=rpsP PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.521e-19
Identity = 51/103 (49.51%), Postives = 67/103 (65.05%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPP-----PPMVAMGRKGGPR 1464
            M ++IRLAR G K RPFYR++AADSR PRDG+ +E LG YNPL  +D   R+ ++ ERV+YWL  GA+P+D V R+L  A +LP      P     G+K   R
Sbjct:    1 MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEDRVKMDLERVQYWLGEGAKPTDRVARMLEAAEVLPKTERNNPKKAVPGKKAQDR 103
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_SPHWW (30S ribosomal protein S16 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rpsP PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.594e-19
Identity = 47/82 (57.32%), Postives = 60/82 (73.17%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGL 1416
            M V IRLAR G K RP+YR++ AD+RSPRDG  +E +G YNPL  +D  KR+ L+ +R K+WLSVGAQP+D V R L  AG+
Sbjct:    1 MAVSIRLARGGAKKRPYYRIVVADARSPRDGAFIEKIGAYNPLLAKDDPKRVVLDTDRAKHWLSVGAQPTDRVARFLDAAGV 82
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_SILPO (30S ribosomal protein S16 OS=Silicibacter pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) GN=rpsP PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.594e-19
Identity = 47/83 (56.63%), Postives = 63/83 (75.90%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLL 1419
            M ++IRLAR G K RPFYR++AADSR PRDG+ +E LG YNPL  +D  +R+ ++ ERV+YWLS GAQ +D V R+L  AG++
Sbjct:    1 MAMKIRLARGGSKKRPFYRIVAADSRMPRDGRFIEKLGTYNPLLPKDSEERVKMDVERVQYWLSQGAQTTDRVARMLEAAGVV 83
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_RHOS5 (30S ribosomal protein S16 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rpsP PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.594e-19
Identity = 48/82 (58.54%), Postives = 59/82 (71.95%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGL 1416
            M ++IRLAR G K RP Y ++A+DSR PRDG+ LE LG YNPL  +D   R+ +N ERV+YWLS GAQP+D V R L  AGL
Sbjct:    1 MAMKIRLARGGSKKRPHYSIVASDSRMPRDGRFLEKLGTYNPLLAKDSEDRIKMNVERVQYWLSQGAQPTDRVARFLEAAGL 82
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_SINMW (30S ribosomal protein S16 OS=Sinorhizobium medicae (strain WSM419) GN=rpsP PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.387e-19
Identity = 46/86 (53.49%), Postives = 63/86 (73.26%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPP 1428
            M ++IRLAR G K RP+Y+++ AD+RSPRDG+ LE LG +NP+  +D  KR+ LN ERV++W+  GAQP+D V R L +AGL   P
Sbjct:    1 MALKIRLARGGSKKRPYYQIVVADARSPRDGRFLEKLGSWNPMLAKDDEKRIELNAERVQHWIDQGAQPTDRVLRFLDQAGLAKRP 86
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_RHOS4 (30S ribosomal protein S16 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rpsP PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.424e-19
Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGL 1416
            M ++IRLAR G K RP Y ++A+DSR PRDG+ LE LG YNPL  +D   R+ +N ERV+YWL+ GAQP+D V R L  AGL
Sbjct:    1 MAMKIRLARGGSKKRPHYSIVASDSRMPRDGRFLEKLGTYNPLLAKDSEDRIKMNLERVQYWLAQGAQPTDRVARFLEAAGL 82
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_RHOS1 (30S ribosomal protein S16 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rpsP PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.424e-19
Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGL 1416
            M ++IRLAR G K RP Y ++A+DSR PRDG+ LE LG YNPL  +D   R+ +N ERV+YWL+ GAQP+D V R L  AGL
Sbjct:    1 MAMKIRLARGGSKKRPHYSIVASDSRMPRDGRFLEKLGTYNPLLAKDSEDRIKMNLERVQYWLAQGAQPTDRVARFLEAAGL 82
[Close]
BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Match: RS16_GLUDA (30S ribosomal protein S16 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rpsP PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.424e-19
Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPR 1464
            M ++IRLAR G K RP+Y ++ ADSRSPRDG+ +E +G YNP+   D   R+ L  ER+ +WLS GA P+D V R L  AGL P P      +K  P+
Sbjct:    1 MSLKIRLARAGAKKRPYYHIVIADSRSPRDGRFIEKVGAYNPMLPSDHADRVRLVNERITHWLSQGALPTDRVARFLGNAGLAPKPAYTEQPKKSAPK 98
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.343e-73
Identity = 160/331 (48.34%), Postives = 200/331 (60.42%), Query Frame = 1 
Query:    7 FIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYR-PTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMASVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTG-FKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLA--LSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADD 987
            F+YVL GWEGSA D R+LRDA++R N LKVP G YYLVD GY N +GFLAPYR  RYHL EWR     P+T  EFFNMKH SARNVIER FG+LK RW ILR  SYY ++   R I  CC+LHN I REM    IE + D       + A + I  +E+S+E + WRDNLA+EIM S S +       KH WT  E+  LVE L+EL     WR+  G F+ GYL ++  MM  K+    + AS  I+SRIK +K  + AL E+     SGF WN+EK  +  EK  +D+ +     A GL +K F HY  L  ++ KDR  G  A +  D
Sbjct:  182 FVYVLAGWEGSAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPSTSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREMTNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSRL------PKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHAST-IDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWS--HPAAKGLLNKSFVHYDELSYVFGKDRATGGRAESFAD 503
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: A5AZD5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010914 PE=4 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.699e-68
Identity = 160/402 (39.80%), Postives = 219/402 (54.48%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMASVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLAL-SGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADDDEEEV----RLEDANVNQHEGEDESGNDFDTSFSVPNTQQXRNAENKRSV-----SLLNFPRRSFSGAEKMV 1176
            MQFIYVLPG+                          YYLVD  YTN KGF APYR  RYHLN+WR+ + PTT  EFFNMKHS+ARNVIE CFGLLK+ W ILRSP +Y IKT  +II   C+LHN I REM VDP+E + D Q    +      IT +E  ++   W D+ +       S    GRG+ K  WT +ED  L+E L+EL      +   G K     ++  M+E KL   GL+ASPHIE  +KTLK ++ A+ ++L   SGF W+  K M+ C++  ++   KG KDA+GL  KPFPH+     ++ KDR  G  A +A D  EE+       D  V+  E E ++ +  +T  S P+  +  +   ++ V     +L+N   R+ +  E +V
Sbjct:  143 MQFIYVLPGY--------------------------YYLVDAXYTNGKGFXAPYRGKRYHLNDWREXHMPTTHEEFFNMKHSTARNVIEXCFGLLKLCWAILRSPCFYPIKTQCKIIXAYCLLHNLIKREMPVDPLEQELDVQ---DHQVVGEPITIIEPLNQ---WMDSTS-------SGQIRGRGRNKQVWTPSEDEKLIECLVELCVSGKVKCDNGSKPRAFLQVEKMLEEKLPNSGLRASPHIELXVKTLKKQFNAIMDMLTHGSGFSWDNAKKMVLCDQDVFEGWVKGHKDANGLRLKPFPHFDDRSLVFGKDRANGKGAMSATDILEELDQGEASNDIGVDDLEVETDASHT-NTVASTPSRMECSSQSRRKRVKNDDTTLINVVARTCNALESLV 504
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.031e-65
Identity = 138/324 (42.59%), Postives = 188/324 (58.02%), Query Frame = 1 
Query:    7 FIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYR-PTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMV-VDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMASVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTG-FKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELL--ALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVG 963
            F+YVL GWEGSA D R+LRDA+++ NGL+VP G YYL D GY N +GFLAPY+  RYHL EWR     PT   E+FNMKHSSARNVIER FG+LK RW ILR  SYY ++   R I  C +LHN I REM   + +E + +G      + A+  I  +E+++E + WRD+LA  +                 W           L+ + G   W++  G F+ GYL ++  MM  KL  C ++A+  I+ RIKTLK  + A+ E+L  A SGF WN+E+  +  EK  +D   +    A GL + PFP+Y  L  ++ +DR  G
Sbjct:  154 FVYVLAGWEGSAADSRILRDAISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPTNAKEYFNMKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREMTYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFTD--------------WQFRGGDSCGMELVSMGG---WKSDNGTFRPGYLAQLVRMMAEKLSGCQVRATTVIDCRIKTLKRTFQAIAEMLGPACSGFGWNDEEKCIVAEKELFDNWVRSPPAAKGLLNNPFPYYDELTYVFGRDRATG 460
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: A5BND9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027369 PE=4 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.481e-61
Identity = 124/209 (59.33%), Postives = 142/209 (67.94%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMASVSSVK-XGRGQQKHYWTTTEDTILVESLLEL 624
            MQFIYVLPGWEGS  D RVLRDAV+RRNGL VP+G YYLVD GYTN KGFLAPYR  RYHLN+WR+G+ PTT  EFFNMKHS+ARNVIERCFGLLK+RW ILRSP +Y IKT  +II  CC++HN I REM VDP+E + D Q                  D    +     +  M S SS +  GRG+ K  WT  ED  LVE L+EL
Sbjct:  211 MQFIYVLPGWEGSTSDSRVLRDAVSRRNGLTVPHGYYYLVDVGYTNGKGFLAPYRGQRYHLNDWREGHMPTTHEEFFNMKHSAARNVIERCFGLLKLRWAILRSPCFYPIKTQCKIILACCLIHNLIKREMXVDPLEQELDVQ------------------DHQVLYNLIFLKHRMNSTSSGQIRGRGRNKRVWTPGEDEKLVECLVEL 401
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: B3IWG4_POPAL (30S ribosomal protein S16 OS=Populus alba GN=rps16-1 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.194e-59
Identity = 109/130 (83.85%), Postives = 117/130 (90.00%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTE 1560
            MVVRIRL+RFGC N+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFRAGLLPPPPM+ MGRKGGPRDTRPVDPM+GRF++PEK  +S         TE
Sbjct:    1 MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNASKNDTE 130
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: B9N881_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_837423 PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.343e-59
Identity = 108/130 (83.08%), Postives = 117/130 (90.00%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTE 1560
            MVVRIRL+RFGC N+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFRAG+LPPPPM+ MGRKGGPRDTRPVDPM+GRF++PEK  +S         TE
Sbjct:    1 MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNASKNDTE 130
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: D7TB62_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g02040 PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.550e-58
Identity = 109/131 (83.21%), Postives = 117/131 (89.31%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTEN 1563
            MVVRIRL+RFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVGAQPSDPVQ+ILFRAGLLPPPPMVAMGRKGG RDTRPVDP++GR +TP KP        D +  E+
Sbjct:    1 MVVRIRLSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVEQPKDDEDGNED 131
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: C6SXD4_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.57964 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.948e-56
Identity = 104/131 (79.39%), Postives = 119/131 (90.84%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTEN 1563
            MVVRIRL+R GCKN+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVGAQPS+PV+R+LFRAG+LPPPPMVAMGRKGGPRDTRPVD ++GR +  EKPA + +  +  ++ EN
Sbjct:    1 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLHQEKPADANNTEQQHDTPEN 131
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: C6SVZ1_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.14251 PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 7.403e-56
Identity = 103/131 (78.63%), Postives = 118/131 (90.08%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTEN 1563
            MVVRIRL+R GCKN+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVKYWLSVGAQPS+PV+R+LFRAG+LPPPPMVAMGRKGGPRDTRPVD ++GR +  EK A + +  +  ++ EN
Sbjct:    1 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVKYWLSVGAQPSEPVERLLFRAGMLPPPPMVAMGRKGGPRDTRPVDALTGRVLNQEKAANANNNEQQHDTPEN 131
[Close]
BLAST of MDP0000273361 vs. ExPASy TrEMBL
Match: D7MM86_ARALL (Ribosomal protein S16 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_918853 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.668e-56
Identity = 106/132 (80.30%), Postives = 117/132 (88.64%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPE-KPAASGDRGKDAESTEN 1563
            MVVRIRL+RFGCKNRPF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMGL F+R+KYWLSVGAQPSDPVQR+LFR+GLLPPPPMVAMGRKGG RDTRPVDPM+GR+V  E K   + D     E TE+
Sbjct:    1 MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNASDNQPKEEDTED 132
[Close]
BLAST of MDP0000273361 vs. TAIR10
Match: AT5G56940.1 (| Symbols: | Ribosomal protein S16 family protein | chr5:23030879-23032200 FORWARD LENGTH=135)

HSP 1 Score: 223.016 bits (567), Expect = 3.677e-58
Identity = 106/131 (80.92%), Postives = 116/131 (88.55%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPE-KPAASGDRGKDAESTE 1560
            MVVRIRL+RFGCKNRPF+RVMAADSRSPRDGKHLEVLGY+NPLPGQDGGKRMGL F+R+KYWLSVGAQPSDPVQR+LFR+GLLPPPPMVAMGRKGG RDTRPVDPM+GR+V  E K   + D     E TE
Sbjct:    1 MVVRIRLSRFGCKNRPFFRVMAADSRSPRDGKHLEVLGYFNPLPGQDGGKRMGLKFDRIKYWLSVGAQPSDPVQRLLFRSGLLPPPPMVAMGRKGGARDTRPVDPMTGRYVDAENKTVNANDNQPKEEDTE 131
[Close]
BLAST of MDP0000273361 vs. TAIR10
Match: AT4G34620.1 (| Symbols: SSR16 | small subunit ribosomal protein 16 | chr4:16535084-16536092 REVERSE LENGTH=113)

HSP 1 Score: 142.895 bits (359), Expect = 4.835e-34
Identity = 65/112 (58.04%), Postives = 87/112 (77.68%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDT-RPVDPMSGRFV 1503
            M V+IRLAR GCK+RPFYRV+ AD +S RDGK +EVLG+Y+PL G++   R+ L F+R+KYWLSVGAQP+D V+ +LFRAGL+PP PMV +G K G + T + V P++G  +
Sbjct:    1 MTVKIRLARLGCKHRPFYRVVVADEKSRRDGKQIEVLGFYDPLQGKEDADRVSLKFDRIKYWLSVGAQPTDTVESMLFRAGLIPPKPMVVVGSKNGQKSTSQHVSPITGEIL 112
[Close]
BLAST of MDP0000273361 vs. TAIR10
Match: AT5G35695.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:13869120-13869941 FORWARD LENGTH=211)

HSP 1 Score: 126.331 bits (316), Expect = 4.683e-29
Identity = 74/195 (37.95%), Postives = 103/195 (52.82%), Query Frame = 1 
Query:    7 FIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYR-PTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVD----PIEADADGQF--QDGNSDANNYITTVE-------SSDEXTAWRDNLAQEIMASVSSVK 549
            FIYVL GWEGSAHD RVL DA+ +          +YLVD G+ N   FLAP+R  RYHL E+    R P TP E FN++H S RNVIER FG+ K R+ I +S   +  K    ++  C  LHNF+ +E   D    P E   +G     +GN+   N I   E         +    WR ++A+++    ++++
Sbjct:   25 FIYVLSGWEGSAHDSRVLSDALRK----------FYLVDCGFANRLNFLAPFRGVRYHLQEFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYKKQAGLVLTCAALHNFLRKECRSDEADFPDEVGNEGDVVNNEGNAMNTNEIDNEEPLEAQKQDRENTNMWRKSMAEDMWKDATNLE 209
[Close]
BLAST of MDP0000273361 vs. TAIR10
Match: AT5G41980.1 (| Symbols: | CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:16793765-16794889 FORWARD LENGTH=374)

HSP 1 Score: 103.99 bits (258), Expect = 2.489e-22
Identity = 55/130 (42.31%), Postives = 72/130 (55.38%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXRE 390
            ++F YVL GWEGSA D +VL  A+TRRN L+VP G YY+VD  Y N  GF+APY     +  E           E FN +H      I R FG LK R+ IL S   Y ++T  +++   C LHN++  E
Sbjct:  183 LRFNYVLAGWEGSASDQQVLNAALTRRNKLQVPQGKYYIVDNKYPNLPGFIAPYHGVSTNSRE--------EAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLE 304
[Close]
BLAST of MDP0000273361 vs. TAIR10
Match: AT1G43722.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr1:16496403-16497377 FORWARD LENGTH=324)

HSP 1 Score: 73.1738 bits (178), Expect = 4.705e-13
Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVP-NGCYYLVDGGYTNXKGFLAPYRRTR-----YHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLK 288
            M F Y+  G  GS +D  VL+ A    +   +P +  YYLVD GY N +G LAPYR +R     YH++++  G RP    E FN  H+S R+VIER F + K
Sbjct:  216 MLFTYIWNGAPGSCYDTAVLQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRVVRYHMSQFYYGPRPRNKHELFNQCHTSLRSVIERTFRIWK 317
[Close]
BLAST of MDP0000273361 vs. TAIR10
Match: AT4G10890.1 (| Symbols: | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:6688833-6692937 FORWARD LENGTH=527)

HSP 1 Score: 70.0922 bits (170), Expect = 3.983e-12
Identity = 37/90 (41.11%), Postives = 50/90 (55.56%), Query Frame = 1 
Query:   40 AHDGRVLRDAVTRRNGLKVP-NGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGIL 306
            +HD +VL+      +    P N  YYLV+  Y    G+L P+RR  YHL ++  G  P T  E FN KH   R+VI+R FG+ K +W IL
Sbjct:   71 SHDTKVLKYCARNESFSPHPSNRKYYLVNSVYPTTTGYLGPHRRILYHLGQFGRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160
[Close]
BLAST of MDP0000273361 vs. TAIR10
Match: AT3G55350.1 (| Symbols: | PIF / Ping-Pong family of plant transposases | chr3:20518518-20520690 FORWARD LENGTH=406)

HSP 1 Score: 61.6178 bits (148), Expect = 1.417e-9
Identity = 54/197 (27.41%), Postives = 84/197 (42.64%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAV--------TRRNGLKVPNGC------YYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKT-XRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTA-WRDNLAQEIMASVSS 543
            M+F+ V+ GW GS +D  VL+++          R NG K+P         Y + D G+      L PY+           G   + P   FN +HS A    +     LK RW I+    +   +    RII VCC+LHN     +++D  +   D Q      D N    + + +DE ++  RD L+ ++    SS
Sbjct:  225 MRFLDVIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPWLLTPYQ-----------GKPTSLPQTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFVCCLLHN-----IIIDMEDQTLDDQPLSQQHDMNYRQRSCKLADEASSVLRDELSDQLCGKNSS 405
[Close]
BLAST of MDP0000273361 vs. TAIR10
Match: AT5G28730.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:10779003-10780218 FORWARD LENGTH=296)

HSP 1 Score: 55.8398 bits (133), Expect = 7.774e-8
Identity = 29/57 (50.88%), Postives = 34/57 (59.65%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVP-NGCYYLVDGGYTNXKGFLAPYRR 168
            M F Y   G  GS HD RVL  A++      VP +  YYLVD GY N +G+LAPYRR
Sbjct:  150 MLFTYCFVGMAGSTHDARVLSAAISDDPLFHVPPDSKYYLVDSGYANKRGYLAPYRR 206
[Close]
BLAST of MDP0000273361 vs. TAIR10
Match: ATCG00050.1 (| Symbols: RPS16 | ribosomal protein S16 | chrC:5084-6188 REVERSE LENGTH=79)

HSP 1 Score: 52.373 bits (124), Expect = 8.595e-7
Identity = 29/81 (35.80%), Postives = 45/81 (55.56%), Query Frame = 1 
Query: 1174 VVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGL 1416
            +V++RL R G K R  YR++A D R  R+G+ L  +G+Y+P+  Q       LN   +  +L  GAQP+     I  +AG+
Sbjct:    1 MVKLRLKRCGRKQRAVYRILAIDVRYRREGRDLSKVGFYDPITNQ-----TFLNLSAILDFLKKGAQPTRTAHDISKKAGI 76
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0004s22700.1 ()

HSP 1 Score: 233.417 bits (594), Expect = 3.097e-61
Identity = 108/130 (83.08%), Postives = 117/130 (90.00%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTE 1560
            MVVRIRL+RFGC N+PFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPS+PVQRILFRAG+LPPPPM+ MGRKGGPRDTRPVDPM+GRF++PEK  +S         TE
Sbjct:    1 MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSSQSNASKNDTE 130
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0013s13190.1 ()

HSP 1 Score: 144.05 bits (362), Expect = 2.471e-34
Identity = 70/115 (60.87%), Postives = 85/115 (73.91%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEK 1515
            M V+IRLAR GCKNR FYR++AADS +PRDGKHL+VLG+Y+PL  +   +R+GLN + VKYWLSVGAQP+D V+ IL RAGL+ PPPMV MG+K GP         SG    PEK
Sbjct:    1 MAVKIRLARLGCKNRAFYRIVAADSHTPRDGKHLQVLGFYDPLAAKGDARRLGLNVDLVKYWLSVGAQPTDTVRGILMRAGLISPPPMVVMGQKKGP---------SGDTSNPEK 106
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0520s00200.1 ()

HSP 1 Score: 137.887 bits (346), Expect = 1.771e-32
Identity = 69/136 (50.74%), Postives = 85/136 (62.50%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPI 408
            ++F YVL GWEGSA D RVL  A+TRRN L+VP G YYLVD  YTN  GF+APY     HLNE+  GY P    E FN +H+  RN  +R FG LK R+ IL S   Y ++T  +++   C LHN+I RE   D I
Sbjct:   23 LRFHYVLAGWEGSASDLRVLNSALTRRNKLQVPEGKYYLVDNKYTNMPGFIAPYNGISCHLNEYSGGYPPRDSRELFNQRHTVLRNATDRSFGALKSRFPILMSAPPYPLQTQVKLVVAACALHNYIRREKPGDLI 158
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0012s04310.1 ()

HSP 1 Score: 137.887 bits (346), Expect = 1.771e-32
Identity = 69/136 (50.74%), Postives = 85/136 (62.50%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPI 408
            ++F YVL GWEGSA D RVL  A+TRRN L+VP G YYLVD  YTN  GF+APY     HLNE+  GY P    E FN +H+  RN  +R FG LK R+ IL S   Y ++T  +++   C LHN+I RE   D I
Sbjct:  186 LRFHYVLAGWEGSASDLRVLNSALTRRNKLQVPEGKYYLVDNKYTNMPGFIAPYNGISCHLNEYSGGYPPRDSRELFNQRHTVLRNATDRSFGALKSRFPILMSAPPYPLQTQVKLVVAACALHNYIRREKPGDLI 321
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0015s04750.1 ()

HSP 1 Score: 129.798 bits (325), Expect = 4.822e-30
Identity = 65/130 (50.00%), Postives = 80/130 (61.54%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXRE 390
            ++F YVL GWEGSA D RVL  A+TRRN  +VP G YYLVD  Y N  GF+APY     HLNE+  GY      E FN +H   RNV +R FG LK R+ IL S   Y ++T  +++   C LHN+I RE
Sbjct:  188 LRFHYVLAGWEGSASDLRVLNSALTRRNKFQVPEGKYYLVDSKYANMPGFIAPYNGVLCHLNEFVGGYPSRDSRELFNQRHLLLRNVTDRIFGALKARFPILLSAPPYPLQTQVKLVVAACALHNYIRRE 317
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0011s09110.1 ()

HSP 1 Score: 125.946 bits (315), Expect = 6.964e-29
Identity = 63/137 (45.99%), Postives = 87/137 (63.50%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIE 411
            ++FIYVL GWEGSAHD RVL DA++R +GLK+  G YY  D GY   KG +  +R  RYHLNE+ + + P    E FN++HSS RN IER FG+LK  +  +    ++  +T   ++  CC++HN I   M VDP +
Sbjct:  180 LKFIYVLAGWEGSAHDSRVLGDALSRPSGLKISKGKYYHGDVGYGIRKGIITHFRGVRYHLNEFTE-HSPENENELFNLRHSSLRNAIEREFGILKSHFRSIDGKPFWSYETQVNVVLACCIIHNHI---MGVDPYD 312
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0071s00220.1 ()

HSP 1 Score: 110.153 bits (274), Expect = 3.954e-24
Identity = 59/125 (47.20%), Postives = 72/125 (57.60%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHN 375
            MQF +V  GWEGSAHD R+  +A+            YYLVD GY N  GFL PYR  RYHL E+R   +P T  E FN  HSS R VIE+ FG+ K RW IL++   +  KT  RI+     +HN
Sbjct:  132 MQFTFVWAGWEGSAHDTRIFLEAIDNPRK-------YYLVDLGYPNEYGFLGPYRGHRYHLQEFRRRGQPQTREEIFNHMHSSLRCVIEQTFGVWKKRWRILQNMPSFNYKTQVRIVVASMAIHN 249
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0591s00200.1 ()

HSP 1 Score: 104.76 bits (260), Expect = 1.661e-22
Identity = 51/125 (40.80%), Postives = 75/125 (60.00%), Query Frame = 1 
Query:   37 SAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIE 411
            + HD RVL D ++R +GLK+P G YYL D  Y   KG +  +R  RYHLNE+ + + P    E FN++HSS R  IER FG+LK R+  +    ++  +T   ++  CC++HN I   + VDP +
Sbjct:   94 NVHDSRVLGDVLSRPSGLKIPEGKYYLGDADYVIRKGIITSFRGVRYHLNEFTE-HSPENKKELFNLRHSSLRTAIERGFGILKSRFRSIDGKPFWSYETQVNVVLACCIIHNHI---IGVDPYD 214
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0014s00700.1 ()

HSP 1 Score: 100.908 bits (250), Expect = 2.399e-21
Identity = 62/140 (44.29%), Postives = 74/140 (52.86%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVT--RRNGLKVPNGC----YYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVD 402
            MQF +V  GW+GSAHD R+  +A+   R    K P G     YYLVD GY N  GFL PYR  RYHL E+R   +P    E FN  HSS R VIER FG           PS +  KT  RI+     +HN+I R  + D
Sbjct:    8 MQFTFVWAGWDGSAHDTRIFLEAIDNPRVKFPKPPEGSNVWKYYLVDSGYPNEYGFLGPYRGQRYHLEEFRRRGQPQNREEIFNRVHSSLRCVIERTFG---------NMPS-FNYKTQVRIVVASMAIHNYIRRTSMQD 137
[Close]
BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Match: POPTR_0018s11120.1 ()

HSP 1 Score: 100.523 bits (249), Expect = 3.133e-21
Identity = 52/101 (51.49%), Postives = 62/101 (61.39%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGL--KVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRW 297
            MQF +V  GWEGSAHD R+  +A+   N    + P G YYLVD GY N  G+L PYR  RYHL E+    +P +  E FN  HSS R VIER FG+ K RW
Sbjct:  292 MQFTFVWAGWEGSAHDTRIFYEAIGNTNIQFPRPPEGKYYLVDSGYPNEYGYLGPYRGERYHLLEFCRRGQPRSREELFNRVHSSLRCVIERTFGVWKKRW 392
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppa014600m ()

HSP 1 Score: 471.47 bits (1212), Expect = 4.763e-133
Identity = 234/372 (62.90%), Postives = 273/372 (73.39%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMA---------SVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADDDEEEVRLEDANVNQHEGEDESGNDF-DTSFSVPN 1086
            +QFIYVL GWEGSAHD RVL+DA++           YYLVD GYTN  GFLAP+R  RYHLN+WRDG+RP TP EFFNMKHSSARNVIERCFGLLKMRW ILRSPS+Y I T RRIISVCCMLHNFI REM ++PIE   D QF DG  + N+YI TVESS++ + WR NLA EI +         S   V+ GRGQ K YWTT ED  L+E L+ELH +  WR  +GFKNGYL K+  M+E KL   GLKASPHIESR+KTLK KY AL + L+ SGF WNEE+MML CEKS +D   K KKDASGLY K FPHY++LGEIY KDR +G NAGNADDDEE+VR +DA+V+Q+      G+DF +  FS P+
Sbjct:  175 LQFIYVLAGWEGSAHDSRVLKDALSY----------YYLVDAGYTNGTGFLAPFRGQRYHLNDWRDGHRPETPNEFFNMKHSSARNVIERCFGLLKMRWAILRSPSFYDIITQRRIISVCCMLHNFIRREMALNPIEHQVDNQFVDGTLETNDYIGTVESSEDWSVWRQNLANEIRSFIVMSSTATSSGKVRGGRGQNKRYWTTKEDNTLMECLMELHQNTNWRGDSGFKNGYLNKLETMLEVKLPNSGLKASPHIESRVKTLKGKYGALADALSQSGFGWNEEEMMLVCEKSVFDAWAKNKKDASGLYGKSFPHYYALGEIYGKDRAIGTNAGNADDDEEDVRRDDASVHQNR---SVGDDFIEEMFSHPD 533
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppa018564m ()

HSP 1 Score: 470.315 bits (1209), Expect = 1.061e-132
Identity = 233/372 (62.63%), Postives = 271/372 (72.85%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMA---------SVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADDDEEEVRLEDANVNQHEGEDESGNDF-DTSFSVPN 1086
            +QFIYVL GWEGSAHD RVL+DA++           YYLVD GYTN  GFLAP+R  RYHLN+WRDG+RP TP EFFNMKHSSARNVIERCFGLLKMRW ILRSPS+Y I T R IISVCCMLHNFI REM +DPIE   D QF DG  + N+YI TVESS++ + WR NLA EI +         S   V+ GRGQ K YWTT ED  L+E L+ELH +  WR  +GFKNGYL K+  M+E KL   GLKASPHIESR+KTLK KY AL + L+ SGF WNEE+MML CEKS +D   K  KDASGLY K FPHY++LGEIY KDR +G NAGNADDDEE+VR +DA+V+Q+      G+DF +  FS P+
Sbjct:   70 LQFIYVLAGWEGSAHDSRVLKDALSY----------YYLVDAGYTNRTGFLAPFRGQRYHLNDWRDGHRPETPNEFFNMKHSSARNVIERCFGLLKMRWAILRSPSFYDIITQRHIISVCCMLHNFIRREMALDPIEHQVDNQFVDGTLETNDYIGTVESSEDWSVWRQNLANEIRSFIVMSSTATSSGKVRGGRGQNKRYWTTKEDNTLIECLMELHQNTNWRGDSGFKNGYLNKLETMLEVKLPNSGLKASPHIESRVKTLKGKYGALADALSQSGFGWNEEEMMLVCEKSVFDAWAKNNKDASGLYGKSFPHYYALGEIYGKDRAIGTNAGNADDDEEDVRRDDASVHQNR---SVGDDFIEEMFSHPD 428
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppa013264m ()

HSP 1 Score: 258.07 bits (658), Expect = 8.276e-69
Identity = 124/133 (93.23%), Postives = 129/133 (96.99%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTENXG 1569
            MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDP+SGR ++PEKP A+GD+ KDAESTEN G
Sbjct:    1 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPLSGRILSPEKP-ANGDQVKDAESTENGG 132
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppa012786m ()

HSP 1 Score: 256.144 bits (653), Expect = 3.145e-68
Identity = 123/131 (93.89%), Postives = 128/131 (97.71%), Query Frame = 1 
Query: 1171 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRFVTPEKPAASGDRGKDAESTEN 1563
            MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDP+SGR ++PEKP A+GD+ KDAESTEN
Sbjct:    1 MVVRIRLARFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVKYWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPLSGRILSPEKP-ANGDQVKDAESTEN 130
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppa019294m ()

HSP 1 Score: 221.476 bits (563), Expect = 8.584e-58
Identity = 129/295 (43.73%), Postives = 153/295 (51.86%), Query Frame = 1 
Query:  202 YRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEIMASVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADDDEEEVRLEDANVNQHEGEDESGNDFDTSFSVPN 1086
            ++  TP EFFNMKH SARNVI+RCFGLLKM W ILRSP +Y I T R+IIS CCM HNFI REM +DPIE   D    D   + N+YI+TVESSDE +                           WTT ED  L+E L+ELH +  WR  +GFKNGYL K+  M+E KL   GLKASPHIESR+KTLK KY                                                     EIY K+R +G NAGNADDDEE+VR  D++V  H+         +  FS PN
Sbjct:    5 HKTETPKEFFNMKHFSARNVIKRCFGLLKMLWEILRSPFFYDIIT-RQIISFCCMFHNFIRREMALDPIEHQVDNHLVDETLETNDYISTVESSDEWS-------------------------RCWTTKEDNTLMECLMELHQNTNWRGDSGFKNGYLNKLETMLEVKLLNSGLKASPHIESRVKTLKGKY-----------------------------------------------------EIYGKERAIGTNAGNADDDEEDVRRADSSV--HQNRSVGDYFIEEMFSHPN 218
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppb021413m ()

HSP 1 Score: 212.616 bits (540), Expect = 3.988e-55
Identity = 101/162 (62.35%), Postives = 122/162 (75.31%), Query Frame = 1 
Query:   31 EGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLA 516
            EGSA + RVLRDA+TR NGL+VP G YYLVDGGYTN +GFLAPYR TRYHL+EWR+G       E+FNMKH+ ARNVIERCFGLLK RWGILRSPS+Y IKT  RII+ CC+LHN I REM  DP+E + +   +  N    + + T+ +SDE T WR++LA
Sbjct:  190 EGSASESRVLRDAITRPNGLRVPTGYYYLVDGGYTNGEGFLAPYRGTRYHLSEWREGNTLVNHQEYFNMKHAKARNVIERCFGLLKARWGILRSPSFYPIKTQCRIITACCLLHNLIRREMSRDPLEHEINEIEETENVIEGDMVGTIGASDEWTTWRNDLA 351
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppb020003m ()

HSP 1 Score: 186.422 bits (472), Expect = 3.060e-47
Identity = 82/141 (58.16%), Postives = 107/141 (75.89%), Query Frame = 1 
Query:  103 GCYYLVDGGYTNXKGFLAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSDANNYITTVESSDEXTAWRDNLAQEI 525
            GCYYLVDGGYTN +G+LAPYR TRYHL+EWR+   P    E+FNMKH++ARNVIERCFG LKMRWGILRSP+++ I+T  +II+ CC+LHN I  EM VDP+E + +G      +   + + T+E SD+ TAWR+NLA ++
Sbjct:    5 GCYYLVDGGYTNGQGYLAPYRGTRYHLSEWRNRRAPNNHEEYFNMKHAAARNVIERCFGFLKMRWGILRSPTFFPIETQCKIITACCLLHNLIRGEMAVDPLENELNGTENGETNQDGDVLGTIEPSDQWTAWRNNLAMQM 145
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppa017447m ()

HSP 1 Score: 146.747 bits (369), Expect = 2.687e-35
Identity = 80/178 (44.94%), Postives = 97/178 (54.49%), Query Frame = 1 
Query:  547 KXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADDDEEEVRLEDANVNQHEGEDESGNDFDTSFSV 1080
            K GR   K +WT  ED+ LVESL EL+ D  WR   GFKNGYLG I  ++E KL  CG+  SPHIESR+ TLK                                     KK+ASGLY + FP Y+  GEIY K   +GAN GNADDDEEE+R +DAN+NQ    D   NDFD + ++
Sbjct:    9 KRGRSLNKRFWTIKEDSTLVESLQELYHDTRWRDDNGFKNGYLGHIEALLEVKLSGCGIHVSPHIESRVTTLKK------------------------------------KKEASGLYGRSFPFYYIFGEIYGKGHPIGANVGNADDDEEEIRRDDANINQTLCGD---NDFDENVNM 147
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppa022346m ()

HSP 1 Score: 140.584 bits (353), Expect = 1.926e-33
Identity = 79/190 (41.58%), Postives = 108/190 (56.84%), Query Frame = 1 
Query:  526 MASVSSVKXGRGQQKHYWTTTEDTILVESLLELHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPHIESRIKTLKAKYFALTELLA-LSGFEWNEEKMMLACEKSAYDEATKGKKDASGLYDKPFPHYHSLGEIYAKDRXVGANAGNADDDEEEVRLEDANVNQHEGEDESGNDFDTSFSVPNTQ 1092
            M S  +      + KH WT  ED  LVE+L EL     W+   GF++GYLG++   ME KL  CGLK  PHI+S +KTLK +  A++++L   SGF WN+E+ M+ CEK  +D+  K    A GL +KPFPH+ +L E + KDR   AN   A+   E +  ED   N +   +  G D D +FS P TQ
Sbjct:  164 MNSTPTTARRNRKDKHIWTPIEDAFLVEALNELCVGGCWKVDNGFRSGYLGQLEKAMEQKLPGCGLKVVPHIDSCVKTLKKQTLAISDMLTNSSGFAWNDEEKMVVCEKQVFDDWVKVHNSAKGLRNKPFPHHDTLVEAFGKDR---ANGKGAEGPAEVI--EDLTDNNNFNFEGDGLD-DINFSSPTTQ 347

HSP 2 Score: 53.1434 bits (126), Expect = 4.043e-7
Identity = 22/30 (73.33%), Postives = 27/30 (90.00%), Query Frame = 1 
Query:    1 MQFIYVLPGWEGSAHDGRVLRDAVTRRNGL 90
            MQFIYVLPGWEG A D R+LRDA++RR+G+
Sbjct:  131 MQFIYVLPGWEGFAADSRILRDAISRRHGM 160
[Close]
BLAST of MDP0000273361 vs. GDR
Match: ppa018109m ()

HSP 1 Score: 132.88 bits (333), Expect = 4.015e-31
Identity = 71/178 (39.89%), Postives = 101/178 (56.74%), Query Frame = 1 
Query:   19 LPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGFLAPYRRTRYHLNEWR-DGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWGILRSPSYYXIKTXRRIISVCCMLHNFIXR-----EMVVDPIEADADGQFQDGNSDAN--NYITTVESSDE-XTAWRDNLAQEI 525
            L GWEGS HD ++L DA++RRNGLKVP G Y+LVD G+ N + FLAP+R  RYH  ++   G  P    E FN++H+S RNVIER FG+ K R+ I +S   +  KT   ++  C  LHNF+ +     E  ++ I+  +       N + N    + T E   E   AWR  +A ++
Sbjct:    7 LGGWEGSTHDSKLLNDALSRRNGLKVPQGKYFLVDYGFHNRRQFLAPFRGVRYHFQDFTGHGNDPQNENELFNLRHASLRNVIERIFGIFKSRFTIFKSAPPFLFKTQAELVLACVALHNFLRKECRSDEFPIESIDESSSSSVLPVNEEENLEPIVQTQEQQRENANAWRATIALDM 184
The following BLAST results are available for this feature:
BLAST of MDP0000273361 vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs NCBI nr)
Total hits: 25
Match NameE-valueIdentityDescription
gi|307136287|gb|ADN34114.1|1.224e-7348.34retrotransposon protein [Cucumis melo subsp. melo][more]
gi|147769233|emb|CAN60760.1|2.023e-6839.80hypothetical protein VITISV_010914 [Vitis vinifera... [more]
gi|307135889|gb|ADN33754.1|9.397e-6642.59retrotransposon protein [Cucumis melo subsp. melo][more]
gi|147779878|emb|CAN65842.1|4.085e-6159.33hypothetical protein VITISV_027369 [Vitis vinifera... [more]
gi|190609947|dbj|BAG49074.1|3.824e-5983.8530S ribosomal protein S16 [Populus alba][more]
gi|224118446|ref|XP_002331484.1|8.519e-5983.08predicted protein [Populus trichocarpa] >gi|222873... [more]
gi|225444887|ref|XP_002281553.1|3.237e-5883.21PREDICTED: 30S ribosomal protein S16 [Vitis vinife... [more]
gi|351727417|ref|NP_001236904.1|1.776e-5679.39uncharacterized protein LOC100499851 [Glycine max]... [more]
gi|351721257|ref|NP_001238227.1|6.750e-5678.63uncharacterized protein LOC100305630 [Glycine max]... [more]
gi|297790240|ref|XP_002863022.1|8.816e-5680.30ribosomal protein S16 family protein [Arabidopsis ... [more]

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BLAST of MDP0000273361 vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Vitis vinifera)
Total hits: 6
Match NameE-valueIdentityDescription
GSVIVT010151860017.032e-6183.21assembled CDS[more]
GSVIVT010223360013.764e-3037.56assembled CDS[more]
GSVIVT010005360016.674e-1134.02assembled CDS[more]
GSVIVT010000250012.010e-722.50assembled CDS[more]
GSVIVT010280650013.428e-736.76assembled CDS[more]
GSVIVT010359860014.477e-728.19assembled CDS[more]
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BLAST of MDP0000273361 vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt Swiss-Prot)
Total hits: 25
Match NameE-valueIdentityDescription
RS16_ROSDO6.825e-2058.5430S ribosomal protein S16 OS=Roseobacter denitrifi... [more]
RS16_RHIME1.521e-1953.4930S ribosomal protein S16 OS=Rhizobium meliloti (s... [more]
RS16_DINSH1.521e-1949.5130S ribosomal protein S16 OS=Dinoroseobacter shiba... [more]
RS16_SPHWW2.594e-1957.3230S ribosomal protein S16 OS=Sphingomonas wittichi... [more]
RS16_SILPO2.594e-1956.6330S ribosomal protein S16 OS=Silicibacter pomeroyi... [more]
RS16_RHOS52.594e-1958.5430S ribosomal protein S16 OS=Rhodobacter sphaeroid... [more]
RS16_SINMW3.387e-1953.4930S ribosomal protein S16 OS=Sinorhizobium medicae... [more]
RS16_RHOS44.424e-1957.3230S ribosomal protein S16 OS=Rhodobacter sphaeroid... [more]
RS16_RHOS14.424e-1957.3230S ribosomal protein S16 OS=Rhodobacter sphaeroid... [more]
RS16_GLUDA4.424e-1947.9630S ribosomal protein S16 OS=Gluconacetobacter dia... [more]

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BLAST of MDP0000273361 vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
E5GCB5_CUCME1.343e-7348.34Retrotransposon protein OS=Cucumis melo subsp. mel... [more]
A5AZD5_VITVI1.699e-6839.80Putative uncharacterized protein OS=Vitis vinifera... [more]
E5GBB2_CUCME1.031e-6542.59Retrotransposon protein OS=Cucumis melo subsp. mel... [more]
A5BND9_VITVI4.481e-6159.33Putative uncharacterized protein OS=Vitis vinifera... [more]
B3IWG4_POPAL4.194e-5983.8530S ribosomal protein S16 OS=Populus alba GN=rps16... [more]
B9N881_POPTR9.343e-5983.08Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7TB62_VITVI3.550e-5883.21Putative uncharacterized protein OS=Vitis vinifera... [more]
C6SXD4_SOYBN1.948e-5679.39Uncharacterized protein OS=Glycine max GN=Gma.5796... [more]
C6SVZ1_SOYBN7.403e-5678.63Uncharacterized protein OS=Glycine max GN=Gma.1425... [more]
D7MM86_ARALL9.668e-5680.30Ribosomal protein S16 family protein OS=Arabidopsi... [more]

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BLAST of MDP0000273361 vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs TAIR 10)
Total hits: 9
Match NameE-valueIdentityDescription
AT5G56940.13.677e-5880.92| Symbols: | Ribosomal protein S16 family protein... [more]
AT4G34620.14.835e-3458.04| Symbols: SSR16 | small subunit ribosomal protein... [more]
AT5G35695.14.683e-2937.95| Symbols: | CONTAINS InterPro DOMAIN/s: Putative... [more]
AT5G41980.12.489e-2242.31| Symbols: | CONTAINS InterPro DOMAIN/s: Putative... [more]
AT1G43722.14.705e-1342.16| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT4G10890.13.983e-1241.11| Symbols: | unknown protein; CONTAINS InterPro D... [more]
AT3G55350.11.417e-927.41| Symbols: | PIF / Ping-Pong family of plant tran... [more]
AT5G28730.17.774e-850.88| Symbols: | unknown protein; BEST Arabidopsis th... [more]
ATCG00050.18.595e-735.80| Symbols: RPS16 | ribosomal protein S16 | chrC:50... [more]
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BLAST of MDP0000273361 vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Populus trichocarpa v2.0)
Total hits: 25
Match NameE-valueIdentityDescription
POPTR_0004s22700.13.097e-6183.08[more]
POPTR_0013s13190.12.471e-3460.87[more]
POPTR_0520s00200.11.771e-3250.74[more]
POPTR_0012s04310.11.771e-3250.74[more]
POPTR_0015s04750.14.822e-3050.00[more]
POPTR_0011s09110.16.964e-2945.99[more]
POPTR_0071s00220.13.954e-2447.20[more]
POPTR_0591s00200.11.661e-2240.80[more]
POPTR_0014s00700.12.399e-2144.29[more]
POPTR_0018s11120.13.133e-2151.49[more]

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BLAST of MDP0000273361 vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Prunus persica v1.0)
Total hits: 25
Match NameE-valueIdentityDescription
ppa014600m4.763e-13362.90[more]
ppa018564m1.061e-13262.63[more]
ppa013264m8.276e-6993.23[more]
ppa012786m3.145e-6893.89[more]
ppa019294m8.584e-5843.73[more]
ppb021413m3.988e-5562.35[more]
ppb020003m3.060e-4758.16[more]
ppa017447m2.687e-3544.94[more]
ppa022346m1.926e-3341.58[more]
ppa018109m4.015e-3139.89[more]

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InterPro
Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000307Ribosomal protein S16HAMAPMF_00385Ribosomal_S16coord: 392..470
score: 23
IPR000307Ribosomal protein S16PANTHERPTHR12919FAMILY NOT NAMEDcoord: 391..505
score: 1.8
IPR000307Ribosomal protein S16PFAMPF00886Ribosomal_S16coord: 399..460
score: 1.3
IPR000307Ribosomal protein S16TIGRFAMsTIGR00002S16: ribosomal protein S16coord: 393..472
score: 5.8
IPR023803Ribosomal protein S16 domainGENE3D3.30.1320.10no descriptioncoord: 393..474
score: 4.9
IPR023803Ribosomal protein S16 domainSUPERFAMILY54565Ribosomal protein S16coord: 392..476
score: 9.1
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 192..284
score: 5.7
NoneNo IPR availablePANTHERPTHR12919:SF5MITOCHONDRIAL RIBOSOMAL PROTEIN S16coord: 391..505
score: 1.8
NoneNo IPR availablePFAMPF13359DDE_4coord: 1..125
score: 2.6
NoneNo IPR availableSEGsegsegcoord: 46..61
score
NoneNo IPR availableSEGsegsegcoord: 53..66
score
NoneNo IPR availableSEGsegsegcoord: 53..63
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>MDP0000273361 ID=MDP0000273361; Name=MDP0000273361; organism=Malus x domestica; type=mRNA; length=7939bp
ATGCAGTTTATATATGTTTTACCTGGATGGGAAGGGTCCGCACATGATGG
TCGAGTTCTTAGAGATGCTGTGACTAGGAGAAATGGATTGAAAGTCCCTA
ATGGTAACACTCACAACTTTTTTTAGTAATTAAAATTCTTAGCTTTTGAA
TTRCAAGTGATATAAAGTTGTAAGTTTGACAATTTAATTCTTTGTACAAT
ARGTTGTTACTATTTGGTTGATGGTGGCTACACAAAYGRAAAAGGTTTTC
TTGCACCTTATAGGCGAACYCGKTATCATTTGAATGAGTGGAGAGATGGT
TATCGTCCTACAACACCGGCTGAGTTTTTTAATATGAAACACTCAAGTGC
TCGGAATGTCATTGAAAGGTGTTTTGGGCTATTGAAAATGCGTTGGGGAA
TCCTTAGGAGCCCATCCTATTACSACATTAAGACAYATCGTCGCATAATT
TCAGTGTGTTGTATGCTCCATAATTTTATAARGAGGGAGATGGTTGTAGA
TCCTATAGAAGCCGATGCGGATGGGCAATTTCAAGATGGGAATTCAGATG
CAAATAACTATATTACCACTGTTGAGTCCTCAGATGAGTGRACTGCATGG
AGGGATAACCTTGCCCAAGAAATGTGGAACAATAGGGCGGTTCATTGAGT
YGGTGTTTGATGTGTTTGTAATCATAATCATTTGGAATGCTTATGTCTAA
TACTGTTTGTGTAATAACMTTTGGAATGTTGTATTTGTTTCTAAGTTAAG
AAAGACATCCTATTTGTAATTGAAATCATTTGAAATGCTTATGATTTCTA
ATATTGTTATGTAGAATGGCTTCTGTTTCATCTGTGAAACRAGGAAGGGG
ACAACARAAACACTATTGGACAACTACTGAGGATACAATATTGGTTGAAT
CATTGCTTGAGTTGCATGGTGACCCGACTTGGCGAGCTRACACTGGTTTT
AAGAATGGTTATTTRGGGAAGATAKAAGTTATGATGGAAGCCAAACTCCY
AAGATGYGGATTAAAGGCGTCTCCCCACATTGAATCACGCATCAAGACTT
TGAAGGCAAAATATTTTGCCTTAACTGAATTGCTAGCTCTCAGTGGGTTT
GAGTGGAATGAAGAGAAAATGATGTTGGCTTGTGAGAAAAGTGCGTATGA
CGAGGCTACGAAGGTTTGCATAWATCTGATTGTAWTTTKTGTTTTATCTG
ATTGTGTTTTGTTTTTAGAATCTCAGTTCCTTGATTAATTACACTGAGTT
CAAAATCTCAGAGTTAATATCATCATCTTCTTAATTACGAATCAGGATAA
TGCACTAACAACATACATAGAAAAAGAAAAACCTCCATGGGAGGTAATTC
CAAGTTCTTTACTGACACCATCACCATACACTYAGAAACCACTTGAAGCT
AGATATTAGAAGGAKTAYAGTGCACATAAACAAAAACTRAGACTTGTATG
AAARACATAGCTTTTTAAATACCAGCTCTTTCATACTGTAAAGAAAAAAG
AGTTATGACAAACTTATAGATGATCTGTTGATCTRCCAGCTTGTGTGGCA
ACATAAAAGAGAATATATATATATATATATATATATATGYATATCTTTTC
GGAAAGGTTCACCCATCATCCCTCTGAAAAAAGGAAAAACTTAACATTGT
TTTTTTGTTTTCCATAGCTAGCACACGTCAAAACATCMTGCCCTGTCCAT
TATTAATTGTTCTRCCTCTTGTCCTTTCTTCAAAGATCGATTTTTCACTT
CTTCCTCTTTACGCTGCCCTCTTCATCCTRTAATAGACCAAGAATTAATA
TATTGTATTACACGCCTTGTGTTTTKTTKTTTTTTTTKKTAGGGTAAAAA
GGATGCAAGTGGATTGTACGATAAGCCTTTTCCGCACTACCACAGTTTGG
GAGAGATTTATGCAAAAGATCGTGYTGTGGGTGCAAATGCTGGTAACGCT
GATGACGATGAAGAAGAAGTTAGACTTGAAGATGCCAATGTCAATCAACA
TGAAGGTGAGGATGAAAGTGGAAATGACTTTGATACTTCTTTCTCAGTAC
CAAATACCCAACAASAAAGGAATGCAGAAAGTAACACATCAAAYATTAGT
CGCAAAAGGRCAAGAGTAGCGGATGAAATGGCCAAGCAATTCTCTATTAT
GGCTAAAGCTATWKCCGATGTGGGACCTAAGMTTGATGGTCTAGTTCATG
CACTGTCAACCRATATAAATCTGACCGAAATGCAACAAAAACTTGACAGT
GAGTTGACCAAAATGGAGTTTTTGTCTCCCATGGATTTATTTAAAGTCAC
TAACTTCTTGGCCAAAGAACATGACCTTTTGAGGGTGTTTTTCAACATGT
CTGATGAAAGGAAGAGTGCATATGTGACTACTTTGTTGCAGACTTGGATK
CATAACGACATCTAAGTGATGGTCCAAATAATGTGAATGCTAGTTTTTTG
CTATGACGTGCTTACTGCYATRATGACATATCAGGGAAAATTGTGAATGT
TTTGTAAATCTAATGACTTATTAGATGACACCATAATGGTGAAGAACTAC
TTTTTGTTGRTATTATGATGTTTAGGCAGGTTAAGAATATTTTGTTGACA
ATCTGATGTGTAGGCARGTTATGAATATTTGATAATATGATGCATACGCA
GGGTATGACAAGTTTGCTTAGGTTGGTTATGGTGGTTAGATAGATGTACT
TTAATGTAAAATATTAACTTTAATGAAGTTATTTCCTACTCTTTGTTTGT
TACTAAWWWTTTTTTCTTCATTTATTTACTATTATACAAAATCCACCTCT
TGAAGATCACTTTAGTTCAARGGGAATCAAGTTTTTTGATTTGAAATGGT
AAAACAAAATTTCTTCTACTCCTTGACATTATGTAGCAAAATATATTCTT
GAAGAGTTAAGACTGAAAATGCTCCTAACAATTTCTTTCYATGTCCTTCT
TGCTCATTAAGCATAATTCTATGCTCATTYACATTATGCACAACCAGTGG
CMGAGCCAGGAATCTTACCACAAGGGGTYGTAGTGTAAAARTCCAGAAAA
AAAAWTTWGGATGGAAATGTTAAAGTTAATGCTTTACTTAAACTGATTMT
GTGTAAAAWGGYTGACTGTTGCCTTTATYAGTCGACCCATTCTATTTATC
AGTCGACCYATTTTATTTATCAGTCGACCCAATTACTTCAGTCGGCTTAW
GTATTGAACTRATTCTGTGTAAAAGGGYTGACTGTTRCCTTTATCAGTYG
ACCCATTYTATTTATCAGTCGACCCATTTTATTTATCAGTCGACCCAATT
ACTTCAACCAATCAAACTCATCAAACCATCAAACCATTGGGGAATGAAGC
GTCGATTAATTCCCGACATATTAGTTATTGGGAAATTATGACCTCTAGGT
TGACAAGGTCCTTTTTGTAGATATGATCTTCGGACCTCATCTCTCATATT
AGCATCATAATCTATTATTCGAGTTCTCAATCCAGAATCCGCTTCAAGAT
TACCCAAAACATCATCTAACTGACTTTGCCTTGAACTTGGAGTTCTTGAA
TTACCAACAGTATTTGAACTATCAACATTATTCGAACTGACCCGATGATG
ACTTTCTCTTAAAAAACCGTTCCATAATAATTCTACATATACAAAATAAT
GAAAATAAATACTCACAATATAAACAAACCATGAATATAATCAAAATAAA
TATGAATTGAATTTCAATTAAATTAAATATATTCTACATATACAAAATAT
TCAAAATAAATACTCACAATATAAACAAACCATCAACATAATCAAAATAA
GTATGAATTGGATTTCAATTAAATTAAATTAAATATCTCACTGTGCACAA
CTATACATATGCCGAAGAGAAAAAACTACAATTTGAGCGAGAAAATTTAG
ATATTAAAGTCAATACTTAAATTTATAAAAAAAAAAWAAACAAAATCATT
TTAGTATGTCTATGAAATACAATTACAATTTAATTTTTTTCTTACTATTA
TATACTATATCAAATTTTATTAAAAAAATATATATAATATTTGATTTGAG
ACAAGGGCATTTTAGTAATCATATTGGTTTATATTCCGATTCTTCAAATT
AGTAAACAGCTTTATGGAATTGTATTCCGATTCCAGACAGTTTTAGTGAA
CAACTTCAACAGGAATCTGATTCTGATTCCACCTCATTTCAATTCCTCCT
CAATCCAATTCCTCCTCAATTCAATTCCTCTCAATTTGATTACGGATTAG
TAAACGCGCTATAAGTCTCTAAACATCTTGGAAACAATTCTTATGCATAT
CAACGGGTGGAGCTTAGAAAGGATCACGGTAACACTGAGATCAGTTGCAC
ACAATGTATTTTGTCGTTCGCTTGCCAATATTGCACCACGAGGAAGAGAT
TTTTGGTGGGCTTATCGACTAACCCAACCTCCACGTGGGTTGAAATTTGG
ATTGTGTTGGGTTGAAGTATTATTAAATCGGTTGAAATCAACCTCTCCGA
ATGACAATAATTAAACGAACATGTATATTAAATAGATTTATGCATTAAAT
TTAGTAACTTTTAAATGCACTTGTTTATTAATGTTTGATTAAATGGTGAA
ACTTGATATAACATCAAAATCAAATGATTTAAGGCTAATTTGACGTGAGT
ATTGATTATTTGTCTGTCATACTATGAGTTCATTTGAAAGCGCTTTTTAA
ATGATTGAAAAACTTTTGGTGAAACTGATTTTGGATTCCAAAAGCACTTC
AAATGCTTTTTGGAAGAAGGACTAGATATGTGCTCTTGCAGGTGTTGGAA
TTTTTTTATTTAGATTGAYGRGCTCGGGGGRYCTAACTCTAATGACACCG
ATATTGTCTCYAACTTTACCACCTGCCCAATYCGTCAGGTGTGGGGTTTT
ACCACAAAAGACCTTGGTATTAGTTAGAGTGGGGTAATCATATTTAAAGT
CATTGCTTTTCTTTACCCCCACCAATGTGGGACTGCTAACACGCCCCCTC
ACGTGTAATCCCATTTAGTGGTTCGCACGTGGAGATCCACACATTTGTAA
TTAAAACTCAGAGGTTGGCTCCAATGGAGTCCAAACTTGTTTTCAATCTT
TTTCAGGAAGTGACTCTTAAGAATTCAGAGGCCGACTGTATGTTAAGAGT
CCAAACTTGTTTCTAAGCCCACACTTCGTGATGACAAGCTCGTTGGCTTG
CACGGGTCTATAACCATGGGCTCTGATACCATGTTGAAATTTTTTTTAGA
TCGAAGGGCCCGGGGGACCTACTCTAACGACACCAATACTATACCTAACT
TTACCACTCTCACAATCCGTCAGGTGTGAGGTTTTATCACGAAAGATCTC
GGTATTAGTTAGAGTGGAGTAATCATATTTAAAGTCATTGCTTTTCTTTA
ACCCCACTGATGTGGGACTGCTAACAGCAGGAAGCTTTTTCAAGATTTAC
TTGAATTTTTACTAAGGATTGATTTTAAAAACATTTTCACCAAAAATGCT
TCAAGTATTTTAAAAGCATTTCCACACAAACTGTATATTAGGAATAAGAA
AGAAACTAATCAAGCTCAACACGTGGAACTCCTCCCAGACTAAAAATAAT
TTAAGTAGATTGAGTTACCAATTTTCTTAAGTGACAATGAACTTGAACAC
GTCGAACCCAAGCCTATTGAGTTGACCAGCGGATTAAAGTCCAAACCAAC
TAACGCACCCGGCGTCCGCGACAATGTGTTTCTGTTTAGAATTTTTGTCT
GAATTAGATGATTACGTGGCCATTTCTTGATTGTTAGATTTGCTTTCGAT
AGTTTAAACCGTCAAAATGAGGCGGTCACTTTTGTCGTTTTTTYYTCATT
TTCATGTAACGCCAAACCGGCRTTATCAGACGCAACGTCCACTTAATTGT
CTGTCTTTATTTTTTTTAAGACACAACAATCTTCAAYGTGGCCCTTGTAA
AATAGGCCTCAAGTCCTATTGGGCCAAACCGGTTTTTAAAACTGGACCCG
AAGGAGGTCCAAGAAYTCGGATCCTAAACATTCTAATTTCCCAGTTCCTT
AAACCCTAGAAAGCAGATAAGCGCAGTGTCAGCTTACTGAATTTTCCCAG
GCGATCGTTTAGTGGAGCTGAGAAAATGGTGGTGAGGATCCGATTGGCGA
GGTTYGGATGCAAAAATAGGCCGTTTTATCGGGTCATGGCGGCCGATAGC
CGATCTCCGAGAGACGGCAAGCACCTCGAAGTCTTGGGCTACTACAATCC
CTTGCCAGGTCTTCTCTCWTTTCTGTTTCTGTGCTGTAATTWTATATATA
TTTTTTTCAAACGTTTGTGGGTTCTAATTGCATCGTGTTAATTAGACACC
ATAGAAATGTTGCATTTTTGTATTGGTAAAGCGGAATTTGATGAATTCGG
ATCAAAATTCAGATGGATAATGTTTGGCTGCCTAGAAAATGTTGGAGAAG
TGATACCTAACACATTTTGGTTATGAATATTCAGAGAAAGCTATTGGGTC
TTTTGTCATCTGAGTAATTTAGTTAGTGATATGCTGATGCTCTGTGATTT
TTATGAAATTTTACAGGTCAAGATGGTGGAAAACGAATGGGTCTGAACTT
TGAAAGAGTGAAGTAAGTGGCTTTCGGCAATGCTTCATTTCGTATGTTAA
TTATCGGTGAATTGCCTTTAGTTGCACTTCGTTATCAGTTAAATTGCCCT
TTTTGGTCCCGGCTTATTCAAAATCAATATTTTTAGCTTTTGTTTTCGGA
AGTTATCAGGTATTGGTATGAAAGATGTTCAGTATATGCAAGGTTCTAAA
AGATGTTAGGCGCTAGTTGGGCGGCGAGCTGGGGCCTAGCGCCTAGGCGG
CTACGCGGATTTAAGTAAATCTACTATATTTTATGTAAACAAGTGTCTAT
TTATACTTAAAATATATGTAATTTCATAAAAAACTACAAAATAGAATGAC
ATATATATTATGAAGTATTGGAACATAATGAAAACATGGGGAACAAGCAT
ATAATGTGTGTTTATTTAAGTATTCAACAAGTCTCTTACAAAATGGTGGA
AAACGAATATGTCTGAACTTTGAAAAAGTGAAGTAAGTGGTTTTCGGCAA
CACTTCATTTTTTGTGTTTAATTCTTGGTGAATTGCCTTTAGTTGCACTT
GTTTATCAGTTAAATTGCGCTTTTTGGTCCTGGGGTATTCAAAATCAATG
TTTTTAGCTTTTGTTTTGGGATGTTATCATGTACTGGTTTGAAAGATGTT
CAATATTTAGCTCTGTCTGTTGATTATACGTTTCCTATTGTTCCTCATGC
ATGTACAAATTATCACTCGACTGTGAGGGTTAACTTGTATAGTCTTGTGT
TCATGCTAGAACTTGATGGGTGCGTATGTTATTGTGTGTAAATATGACCC
ACTAATGATGACGGAGGCTAGATGTCTTGCGAGATATATACATAAGGAGG
ATATATGCTCACTGAAAAATTGTCACATTTGGATCAAGACACTTTATTGG
TAGAAATTACTGTGAGTTTGAGATCTGGATCTCAATCGTAGGGTTGCTTG
ATTCCGTGCTTATTATGGGTACTCTTAAGTTGAAATTTAATAGAATTCTT
TTGAAAATTTGAGAATCTGAAACAGTTCTTCCCAGGAGGCTTATGAGAGA
GAGAATTCCTGTTTTCAAATTAAGTTTATCTGCTGTATCCCATCAGTTTG
TTCACTCTTTCTGCAGGTATTGGCTATCCGTTGGAGCTCAGCCTTCGGAT
CCAGTGCAGCGTATTCTTTTCAGAGCTGGGCTGTTGCCTCCACCACCAAT
GGTGGCAATGGGACGTAAGGGAGGGCCACGTGACACGCGACCTGTTGATC
CTATGAGTGGACGGTTTGTGACTCCTGAGAAGCCAGCAGCTAGTGGTGAT
CGAGGGAAAGATGCGGAAAGCACTGAAAACGRTGGTTAA
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protein sequence of MDP0000273361

>MDP0000273361 ID=MDP0000273361; Name=MDP0000273361; organism=Malus x domestica; type=polypeptide; length=523bp
MQFIYVLPGWEGSAHDGRVLRDAVTRRNGLKVPNGCYYLVDGGYTNXKGF
LAPYRRTRYHLNEWRDGYRPTTPAEFFNMKHSSARNVIERCFGLLKMRWG
ILRSPSYYXIKTXRRIISVCCMLHNFIXREMVVDPIEADADGQFQDGNSD
ANNYITTVESSDEXTAWRDNLAQEIMASVSSVKXGRGQQKHYWTTTEDTI
LVESLLELHGDPTWRAXTGFKNGYLGKIXVMMEAKLXRCGLKASPHIESR
IKTLKAKYFALTELLALSGFEWNEEKMMLACEKSAYDEATKGKKDASGLY
DKPFPHYHSLGEIYAKDRXVGANAGNADDDEEEVRLEDANVNQHEGEDES
GNDFDTSFSVPNTQQXRNAENKRSVSLLNFPRRSFSGAEKMVVRIRLARF
GCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK
YWLSVGAQPSDPVQRILFRAGLLPPPPMVAMGRKGGPRDTRPVDPMSGRF
VTPEKPAASGDRGKDAESTENXG
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mRNA from alignment at unanchored:64063200..64071138-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000273361 ID=MDP0000273361; Name=MDP0000273361; organism=Malus x domestica; type=mRNA; location=Sequence derived from: unanchored:64063200..64071138- (Malus x domestica
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mRNA from alignment at MDC005592.141:945..8883-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000273361 ID=MDP0000273361; Name=MDP0000273361; organism=Malus x domestica; type=mRNA; length=7939bp; location=Sequence derived from: MDC005592.141:945..8883- (Malus x domestica
ATGCAGTTTATATATGTTTTACCTGGATGGGAAGGGTCCGCACATGATGG
TCGAGTTCTTAGAGATGCTGTGACTAGGAGAAATGGATTGAAAGTCCCTA
ATGGTAACACTCACAACTTTTTTTAGTAATTAAAATTCTTAGCTTTTGAA
TTRCAAGTGATATAAAGTTGTAAGTTTGACAATTTAATTCTTTGTACAAT
ARGTTGTTACTATTTGGTTGATGGTGGCTACACAAAYGRAAAAGGTTTTC
TTGCACCTTATAGGCGAACYCGKTATCATTTGAATGAGTGGAGAGATGGT
TATCGTCCTACAACACCGGCTGAGTTTTTTAATATGAAACACTCAAGTGC
TCGGAATGTCATTGAAAGGTGTTTTGGGCTATTGAAAATGCGTTGGGGAA
TCCTTAGGAGCCCATCCTATTACSACATTAAGACAYATCGTCGCATAATT
TCAGTGTGTTGTATGCTCCATAATTTTATAARGAGGGAGATGGTTGTAGA
TCCTATAGAAGCCGATGCGGATGGGCAATTTCAAGATGGGAATTCAGATG
CAAATAACTATATTACCACTGTTGAGTCCTCAGATGAGTGRACTGCATGG
AGGGATAACCTTGCCCAAGAAATGTGGAACAATAGGGCGGTTCATTGAGT
YGGTGTTTGATGTGTTTGTAATCATAATCATTTGGAATGCTTATGTCTAA
TACTGTTTGTGTAATAACMTTTGGAATGTTGTATTTGTTTCTAAGTTAAG
AAAGACATCCTATTTGTAATTGAAATCATTTGAAATGCTTATGATTTCTA
ATATTGTTATGTAGAATGGCTTCTGTTTCATCTGTGAAACRAGGAAGGGG
ACAACARAAACACTATTGGACAACTACTGAGGATACAATATTGGTTGAAT
CATTGCTTGAGTTGCATGGTGACCCGACTTGGCGAGCTRACACTGGTTTT
AAGAATGGTTATTTRGGGAAGATAKAAGTTATGATGGAAGCCAAACTCCY
AAGATGYGGATTAAAGGCGTCTCCCCACATTGAATCACGCATCAAGACTT
TGAAGGCAAAATATTTTGCCTTAACTGAATTGCTAGCTCTCAGTGGGTTT
GAGTGGAATGAAGAGAAAATGATGTTGGCTTGTGAGAAAAGTGCGTATGA
CGAGGCTACGAAGGTTTGCATAWATCTGATTGTAWTTTKTGTTTTATCTG
ATTGTGTTTTGTTTTTAGAATCTCAGTTCCTTGATTAATTACACTGAGTT
CAAAATCTCAGAGTTAATATCATCATCTTCTTAATTACGAATCAGGATAA
TGCACTAACAACATACATAGAAAAAGAAAAACCTCCATGGGAGGTAATTC
CAAGTTCTTTACTGACACCATCACCATACACTYAGAAACCACTTGAAGCT
AGATATTAGAAGGAKTAYAGTGCACATAAACAAAAACTRAGACTTGTATG
AAARACATAGCTTTTTAAATACCAGCTCTTTCATACTGTAAAGAAAAAAG
AGTTATGACAAACTTATAGATGATCTGTTGATCTRCCAGCTTGTGTGGCA
ACATAAAAGAGAATATATATATATATATATATATATATGYATATCTTTTC
GGAAAGGTTCACCCATCATCCCTCTGAAAAAAGGAAAAACTTAACATTGT
TTTTTTGTTTTCCATAGCTAGCACACGTCAAAACATCMTGCCCTGTCCAT
TATTAATTGTTCTRCCTCTTGTCCTTTCTTCAAAGATCGATTTTTCACTT
CTTCCTCTTTACGCTGCCCTCTTCATCCTRTAATAGACCAAGAATTAATA
TATTGTATTACACGCCTTGTGTTTTKTTKTTTTTTTTKKTAGGGTAAAAA
GGATGCAAGTGGATTGTACGATAAGCCTTTTCCGCACTACCACAGTTTGG
GAGAGATTTATGCAAAAGATCGTGYTGTGGGTGCAAATGCTGGTAACGCT
GATGACGATGAAGAAGAAGTTAGACTTGAAGATGCCAATGTCAATCAACA
TGAAGGTGAGGATGAAAGTGGAAATGACTTTGATACTTCTTTCTCAGTAC
CAAATACCCAACAASAAAGGAATGCAGAAAGTAACACATCAAAYATTAGT
CGCAAAAGGRCAAGAGTAGCGGATGAAATGGCCAAGCAATTCTCTATTAT
GGCTAAAGCTATWKCCGATGTGGGACCTAAGMTTGATGGTCTAGTTCATG
CACTGTCAACCRATATAAATCTGACCGAAATGCAACAAAAACTTGACAGT
GAGTTGACCAAAATGGAGTTTTTGTCTCCCATGGATTTATTTAAAGTCAC
TAACTTCTTGGCCAAAGAACATGACCTTTTGAGGGTGTTTTTCAACATGT
CTGATGAAAGGAAGAGTGCATATGTGACTACTTTGTTGCAGACTTGGATK
CATAACGACATCTAAGTGATGGTCCAAATAATGTGAATGCTAGTTTTTTG
CTATGACGTGCTTACTGCYATRATGACATATCAGGGAAAATTGTGAATGT
TTTGTAAATCTAATGACTTATTAGATGACACCATAATGGTGAAGAACTAC
TTTTTGTTGRTATTATGATGTTTAGGCAGGTTAAGAATATTTTGTTGACA
ATCTGATGTGTAGGCARGTTATGAATATTTGATAATATGATGCATACGCA
GGGTATGACAAGTTTGCTTAGGTTGGTTATGGTGGTTAGATAGATGTACT
TTAATGTAAAATATTAACTTTAATGAAGTTATTTCCTACTCTTTGTTTGT
TACTAAWWWTTTTTTCTTCATTTATTTACTATTATACAAAATCCACCTCT
TGAAGATCACTTTAGTTCAARGGGAATCAAGTTTTTTGATTTGAAATGGT
AAAACAAAATTTCTTCTACTCCTTGACATTATGTAGCAAAATATATTCTT
GAAGAGTTAAGACTGAAAATGCTCCTAACAATTTCTTTCYATGTCCTTCT
TGCTCATTAAGCATAATTCTATGCTCATTYACATTATGCACAACCAGTGG
CMGAGCCAGGAATCTTACCACAAGGGGTYGTAGTGTAAAARTCCAGAAAA
AAAAWTTWGGATGGAAATGTTAAAGTTAATGCTTTACTTAAACTGATTMT
GTGTAAAAWGGYTGACTGTTGCCTTTATYAGTCGACCCATTCTATTTATC
AGTCGACCYATTTTATTTATCAGTCGACCCAATTACTTCAGTCGGCTTAW
GTATTGAACTRATTCTGTGTAAAAGGGYTGACTGTTRCCTTTATCAGTYG
ACCCATTYTATTTATCAGTCGACCCATTTTATTTATCAGTCGACCCAATT
ACTTCAACCAATCAAACTCATCAAACCATCAAACCATTGGGGAATGAAGC
GTCGATTAATTCCCGACATATTAGTTATTGGGAAATTATGACCTCTAGGT
TGACAAGGTCCTTTTTGTAGATATGATCTTCGGACCTCATCTCTCATATT
AGCATCATAATCTATTATTCGAGTTCTCAATCCAGAATCCGCTTCAAGAT
TACCCAAAACATCATCTAACTGACTTTGCCTTGAACTTGGAGTTCTTGAA
TTACCAACAGTATTTGAACTATCAACATTATTCGAACTGACCCGATGATG
ACTTTCTCTTAAAAAACCGTTCCATAATAATTCTACATATACAAAATAAT
GAAAATAAATACTCACAATATAAACAAACCATGAATATAATCAAAATAAA
TATGAATTGAATTTCAATTAAATTAAATATATTCTACATATACAAAATAT
TCAAAATAAATACTCACAATATAAACAAACCATCAACATAATCAAAATAA
GTATGAATTGGATTTCAATTAAATTAAATTAAATATCTCACTGTGCACAA
CTATACATATGCCGAAGAGAAAAAACTACAATTTGAGCGAGAAAATTTAG
ATATTAAAGTCAATACTTAAATTTATAAAAAAAAAAWAAACAAAATCATT
TTAGTATGTCTATGAAATACAATTACAATTTAATTTTTTTCTTACTATTA
TATACTATATCAAATTTTATTAAAAAAATATATATAATATTTGATTTGAG
ACAAGGGCATTTTAGTAATCATATTGGTTTATATTCCGATTCTTCAAATT
AGTAAACAGCTTTATGGAATTGTATTCCGATTCCAGACAGTTTTAGTGAA
CAACTTCAACAGGAATCTGATTCTGATTCCACCTCATTTCAATTCCTCCT
CAATCCAATTCCTCCTCAATTCAATTCCTCTCAATTTGATTACGGATTAG
TAAACGCGCTATAAGTCTCTAAACATCTTGGAAACAATTCTTATGCATAT
CAACGGGTGGAGCTTAGAAAGGATCACGGTAACACTGAGATCAGTTGCAC
ACAATGTATTTTGTCGTTCGCTTGCCAATATTGCACCACGAGGAAGAGAT
TTTTGGTGGGCTTATCGACTAACCCAACCTCCACGTGGGTTGAAATTTGG
ATTGTGTTGGGTTGAAGTATTATTAAATCGGTTGAAATCAACCTCTCCGA
ATGACAATAATTAAACGAACATGTATATTAAATAGATTTATGCATTAAAT
TTAGTAACTTTTAAATGCACTTGTTTATTAATGTTTGATTAAATGGTGAA
ACTTGATATAACATCAAAATCAAATGATTTAAGGCTAATTTGACGTGAGT
ATTGATTATTTGTCTGTCATACTATGAGTTCATTTGAAAGCGCTTTTTAA
ATGATTGAAAAACTTTTGGTGAAACTGATTTTGGATTCCAAAAGCACTTC
AAATGCTTTTTGGAAGAAGGACTAGATATGTGCTCTTGCAGGTGTTGGAA
TTTTTTTATTTAGATTGAYGRGCTCGGGGGRYCTAACTCTAATGACACCG
ATATTGTCTCYAACTTTACCACCTGCCCAATYCGTCAGGTGTGGGGTTTT
ACCACAAAAGACCTTGGTATTAGTTAGAGTGGGGTAATCATATTTAAAGT
CATTGCTTTTCTTTACCCCCACCAATGTGGGACTGCTAACACGCCCCCTC
ACGTGTAATCCCATTTAGTGGTTCGCACGTGGAGATCCACACATTTGTAA
TTAAAACTCAGAGGTTGGCTCCAATGGAGTCCAAACTTGTTTTCAATCTT
TTTCAGGAAGTGACTCTTAAGAATTCAGAGGCCGACTGTATGTTAAGAGT
CCAAACTTGTTTCTAAGCCCACACTTCGTGATGACAAGCTCGTTGGCTTG
CACGGGTCTATAACCATGGGCTCTGATACCATGTTGAAATTTTTTTTAGA
TCGAAGGGCCCGGGGGACCTACTCTAACGACACCAATACTATACCTAACT
TTACCACTCTCACAATCCGTCAGGTGTGAGGTTTTATCACGAAAGATCTC
GGTATTAGTTAGAGTGGAGTAATCATATTTAAAGTCATTGCTTTTCTTTA
ACCCCACTGATGTGGGACTGCTAACAGCAGGAAGCTTTTTCAAGATTTAC
TTGAATTTTTACTAAGGATTGATTTTAAAAACATTTTCACCAAAAATGCT
TCAAGTATTTTAAAAGCATTTCCACACAAACTGTATATTAGGAATAAGAA
AGAAACTAATCAAGCTCAACACGTGGAACTCCTCCCAGACTAAAAATAAT
TTAAGTAGATTGAGTTACCAATTTTCTTAAGTGACAATGAACTTGAACAC
GTCGAACCCAAGCCTATTGAGTTGACCAGCGGATTAAAGTCCAAACCAAC
TAACGCACCCGGCGTCCGCGACAATGTGTTTCTGTTTAGAATTTTTGTCT
GAATTAGATGATTACGTGGCCATTTCTTGATTGTTAGATTTGCTTTCGAT
AGTTTAAACCGTCAAAATGAGGCGGTCACTTTTGTCGTTTTTTYYTCATT
TTCATGTAACGCCAAACCGGCRTTATCAGACGCAACGTCCACTTAATTGT
CTGTCTTTATTTTTTTTAAGACACAACAATCTTCAAYGTGGCCCTTGTAA
AATAGGCCTCAAGTCCTATTGGGCCAAACCGGTTTTTAAAACTGGACCCG
AAGGAGGTCCAAGAAYTCGGATCCTAAACATTCTAATTTCCCAGTTCCTT
AAACCCTAGAAAGCAGATAAGCGCAGTGTCAGCTTACTGAATTTTCCCAG
GCGATCGTTTAGTGGAGCTGAGAAAATGGTGGTGAGGATCCGATTGGCGA
GGTTYGGATGCAAAAATAGGCCGTTTTATCGGGTCATGGCGGCCGATAGC
CGATCTCCGAGAGACGGCAAGCACCTCGAAGTCTTGGGCTACTACAATCC
CTTGCCAGGTCTTCTCTCWTTTCTGTTTCTGTGCTGTAATTWTATATATA
TTTTTTTCAAACGTTTGTGGGTTCTAATTGCATCGTGTTAATTAGACACC
ATAGAAATGTTGCATTTTTGTATTGGTAAAGCGGAATTTGATGAATTCGG
ATCAAAATTCAGATGGATAATGTTTGGCTGCCTAGAAAATGTTGGAGAAG
TGATACCTAACACATTTTGGTTATGAATATTCAGAGAAAGCTATTGGGTC
TTTTGTCATCTGAGTAATTTAGTTAGTGATATGCTGATGCTCTGTGATTT
TTATGAAATTTTACAGGTCAAGATGGTGGAAAACGAATGGGTCTGAACTT
TGAAAGAGTGAAGTAAGTGGCTTTCGGCAATGCTTCATTTCGTATGTTAA
TTATCGGTGAATTGCCTTTAGTTGCACTTCGTTATCAGTTAAATTGCCCT
TTTTGGTCCCGGCTTATTCAAAATCAATATTTTTAGCTTTTGTTTTCGGA
AGTTATCAGGTATTGGTATGAAAGATGTTCAGTATATGCAAGGTTCTAAA
AGATGTTAGGCGCTAGTTGGGCGGCGAGCTGGGGCCTAGCGCCTAGGCGG
CTACGCGGATTTAAGTAAATCTACTATATTTTATGTAAACAAGTGTCTAT
TTATACTTAAAATATATGTAATTTCATAAAAAACTACAAAATAGAATGAC
ATATATATTATGAAGTATTGGAACATAATGAAAACATGGGGAACAAGCAT
ATAATGTGTGTTTATTTAAGTATTCAACAAGTCTCTTACAAAATGGTGGA
AAACGAATATGTCTGAACTTTGAAAAAGTGAAGTAAGTGGTTTTCGGCAA
CACTTCATTTTTTGTGTTTAATTCTTGGTGAATTGCCTTTAGTTGCACTT
GTTTATCAGTTAAATTGCGCTTTTTGGTCCTGGGGTATTCAAAATCAATG
TTTTTAGCTTTTGTTTTGGGATGTTATCATGTACTGGTTTGAAAGATGTT
CAATATTTAGCTCTGTCTGTTGATTATACGTTTCCTATTGTTCCTCATGC
ATGTACAAATTATCACTCGACTGTGAGGGTTAACTTGTATAGTCTTGTGT
TCATGCTAGAACTTGATGGGTGCGTATGTTATTGTGTGTAAATATGACCC
ACTAATGATGACGGAGGCTAGATGTCTTGCGAGATATATACATAAGGAGG
ATATATGCTCACTGAAAAATTGTCACATTTGGATCAAGACACTTTATTGG
TAGAAATTACTGTGAGTTTGAGATCTGGATCTCAATCGTAGGGTTGCTTG
ATTCCGTGCTTATTATGGGTACTCTTAAGTTGAAATTTAATAGAATTCTT
TTGAAAATTTGAGAATCTGAAACAGTTCTTCCCAGGAGGCTTATGAGAGA
GAGAATTCCTGTTTTCAAATTAAGTTTATCTGCTGTATCCCATCAGTTTG
TTCACTCTTTCTGCAGGTATTGGCTATCCGTTGGAGCTCAGCCTTCGGAT
CCAGTGCAGCGTATTCTTTTCAGAGCTGGGCTGTTGCCTCCACCACCAAT
GGTGGCAATGGGACGTAAGGGAGGGCCACGTGACACGCGACCTGTTGATC
CTATGAGTGGACGGTTTGTGACTCCTGAGAAGCCAGCAGCTAGTGGTGAT
CGAGGGAAAGATGCGGAAAGCACTGAAAACGRTGGTTAA
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Coding sequence (CDS) from alignment at MDC005592.141:945..8883-

>MDP0000273361 ID=MDP0000273361; Name=MDP0000273361; organism=Malus x domestica; type=CDS; length=1572bp; location=Sequence derived from: MDC005592.141:945..8883- (Malus x domestica
ATGCAGTTTATATATGTTTTACCTGGATGGGAAGGGTCCGCACATGATGG
TCGAGTTCTTAGAGATGCTGTGACTAGGAGAAATGGATTGAAAGTCCCTA
ATGGTTGTTACTATTTGGTTGATGGTGGCTACACAAAYGRAAAAGGTTTT
CTTGCACCTTATAGGCGAACYCGKTATCATTTGAATGAGTGGAGAGATGG
TTATCGTCCTACAACACCGGCTGAGTTTTTTAATATGAAACACTCAAGTG
CTCGGAATGTCATTGAAAGGTGTTTTGGGCTATTGAAAATGCGTTGGGGA
ATCCTTAGGAGCCCATCCTATTACSACATTAAGACAYATCGTCGCATAAT
TTCAGTGTGTTGTATGCTCCATAATTTTATAARGAGGGAGATGGTTGTAG
ATCCTATAGAAGCCGATGCGGATGGGCAATTTCAAGATGGGAATTCAGAT
GCAAATAACTATATTACCACTGTTGAGTCCTCAGATGAGTGRACTGCATG
GAGGGATAACCTTGCCCAAGAAATAATGGCTTCTGTTTCATCTGTGAAAC
RAGGAAGGGGACAACARAAACACTATTGGACAACTACTGAGGATACAATA
TTGGTTGAATCATTGCTTGAGTTGCATGGTGACCCGACTTGGCGAGCTRA
CACTGGTTTTAAGAATGGTTATTTRGGGAAGATAKAAGTTATGATGGAAG
CCAAACTCCYAAGATGYGGATTAAAGGCGTCTCCCCACATTGAATCACGC
ATCAAGACTTTGAAGGCAAAATATTTTGCCTTAACTGAATTGCTAGCTCT
CAGTGGGTTTGAGTGGAATGAAGAGAAAATGATGTTGGCTTGTGAGAAAA
GTGCGTATGACGAGGCTACGAAGGGTAAAAAGGATGCAAGTGGATTGTAC
GATAAGCCTTTTCCGCACTACCACAGTTTGGGAGAGATTTATGCAAAAGA
TCGTGYTGTGGGTGCAAATGCTGGTAACGCTGATGACGATGAAGAAGAAG
TTAGACTTGAAGATGCCAATGTCAATCAACATGAAGGTGAGGATGAAAGT
GGAAATGACTTTGATACTTCTTTCTCAGTACCAAATACCCAACAASAAAG
GAATGCAGAAAATAAGCGCAGTGTCAGCTTACTGAATTTTCCCAGGCGAT
CGTTTAGTGGAGCTGAGAAAATGGTGGTGAGGATCCGATTGGCGAGGTTY
GGATGCAAAAATAGGCCGTTTTATCGGGTCATGGCGGCCGATAGCCGATC
TCCGAGAGACGGCAAGCACCTCGAAGTCTTGGGCTACTACAATCCCTTGC
CAGGTCAAGATGGTGGAAAACGAATGGGTCTGAACTTTGAAAGAGTGAAG
TATTGGCTATCCGTTGGAGCTCAGCCTTCGGATCCAGTGCAGCGTATTCT
TTTCAGAGCTGGGCTGTTGCCTCCACCACCAATGGTGGCAATGGGACGTA
AGGGAGGGCCACGTGACACGCGACCTGTTGATCCTATGAGTGGACGGTTT
GTGACTCCTGAGAAGCCAGCAGCTAGTGGTGATCGAGGGAAAGATGCGGA
AAGCACTGAAAACGRTGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000307Ribosomal_bS16
IPR023803Ribosomal_bS16_dom_sf
IPR024752Myb/SANT-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation