MDP0000321752, MDP0000321752 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000321752
Unique Name	MDP0000321752
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	2296

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr17	chromosome	chr17:20178772..20181067 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC019111.173	contig	MDC019111.173:494..2789 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs NCBI nr	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs Vitis vinifera	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs UniProt Swiss-Prot	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs UniProt TrEMBL	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs TAIR 10	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs Populus trichocarpa v2.0	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs Prunus persica v1.0	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000321752_exon_1	MDP0000321752_exon_1	Malus x domestica	CDS
MDP0000321752_exon_2	MDP0000321752_exon_2	Malus x domestica	CDS
MDP0000321752_exon_3	MDP0000321752_exon_3	Malus x domestica	CDS
MDP0000321752_exon_4	MDP0000321752_exon_4	Malus x domestica	CDS

Homology

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|255551384|ref|XP_002516738.1| (peptidyl-tRNA hydrolase, putative [Ricinus communis] >gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase, putative [Ricinus communis])

HSP 1 Score: 196.052 bits (497), Expect = 1.723e-48
Identity = 89/108 (82.41%), Postives = 102/108 (94.44%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEMSLPNGV+R+QPKGGHG+HNGVKSVM HLDGCREFPRLCIGIGNPPGTMDM+A+LLQ+FS+ ER QIDAAL QG++AVRTLVL+GF+Q+IT FNL QKYKYHKV
Sbjct:  146 IYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRTLVLSGFNQNITRFNLGQKYKYHKV 253

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|224079329|ref|XP_002305823.1| (predicted protein [Populus trichocarpa] >gi|222848787|gb|EEE86334.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 192.971 bits (489), Expect = 1.459e-47
Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEM+LPNG+LR+QPKGGHG+HNGVKSVM HLDGCREFPRLCIGIGNPPGTMDMKA+LLQ+FS  ER QIDA+L+QGVEA+RTL+L GF   IT FNL QKYKYHKV
Sbjct:  137 IYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|225452074|ref|XP_002284030.1| (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic [Vitis vinifera] >gi|296087264|emb|CBI33638.3| unnamed protein product [Vitis vinifera])

HSP 1 Score: 190.274 bits (482), Expect = 9.457e-47
Identity = 88/108 (81.48%), Postives = 97/108 (89.81%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            VYDEM+LPNGVLR+ P+GGHGYHNG+K+VMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQ+FS  ER QIDAA +QG+ AVR LVLNGF+ S T FNL QKYKYHKV
Sbjct:  139 VYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKYHKV 246

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|358248120|ref|NP_001239818.1| (uncharacterized protein LOC100804132 [Glycine max] >gi|255645504|gb|ACU23247.1| unknown [Glycine max])

HSP 1 Score: 181.03 bits (458), Expect = 5.737e-44
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            V+DE SLPNGVLR+QPKGGHG+HNG+K+VMGHLDGC  FPRL +GIGNPPGTMD++AYLLQ+FS  ER QIDA+L+Q V AVRT+VLNGFDQ +  FNL QKYKYHKV
Sbjct:  137 VFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQHVNRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|388501072|gb|AFK38602.1| (unknown [Lotus japonicus])

HSP 1 Score: 178.333 bits (451), Expect = 3.719e-43
Identity = 81/108 (75.00%), Postives = 97/108 (89.81%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            VYDE SLPNGVLR+QPKGGHG+HNG K+VMGHLDG R+FPRL IGIGNPPG+MD +A+LLQ+FS+VER QID +L+QGV+A+RTLVL+GF Q ++ FNL QKYKYHKV
Sbjct:  140 VYDETSLPNGVLRLQPKGGHGHHNGSKNVMGHLDGSRDFPRLAIGIGNPPGSMDSRAFLLQKFSSVERQQIDDSLEQGVQAIRTLVLHGFSQHVSRFNLGQKYKYHKV 247

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|297811751|ref|XP_002873759.1| (peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp. lyrata] >gi|297319596|gb|EFH50018.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 176.022 bits (445), Expect = 1.846e-42
Identity = 83/108 (76.85%), Postives = 94/108 (87.04%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEM+LPNGVLR+QPKGG GYHNGVKSVMGHLDG R FPRL IGIG PPG MDMKA+LLQ+FS +ER QID AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+H V
Sbjct:  132 LYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLERKQIDEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHNV 239

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|357508117|ref|XP_003624347.1| (Chloroplastic group IIB intron splicing facilitator CRS2-B [Medicago truncatula] >gi|355499362|gb|AES80565.1| Chloroplastic group IIB intron splicing facilitator CRS2-B [Medicago truncatula])

HSP 1 Score: 175.637 bits (444), Expect = 2.410e-42
Identity = 78/108 (72.22%), Postives = 98/108 (90.74%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            VYDE SLPNGVL++QPKGGHG+HNG+K+V+GHLDG R+FPRL IGIGNPPGTMD++A+LLQ+FS+VER Q+D +L+QGV+AV+TLVLNGF+  +  FNL QKYKY+KV
Sbjct:  144 VYDETSLPNGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVKTLVLNGFNHHVNRFNLGQKYKYNKV 251

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|15237280|ref|NP_197118.1| (chloroplastic group IIB intron splicing facilitator CRS2-B [Arabidopsis thaliana] >gi|145334495|ref|NP_001078593.1| chloroplastic group IIB intron splicing facilitator CRS2-B [Arabidopsis thaliana] >gi|75311128|sp|Q9LF14.1|CRS2B_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic; AltName: Full=CRS2-like protein B; AltName: Full=Chloroplastic RNA splicing factor 2-B; Flags: Precursor >gi|9755824|emb|CAC01855.1| CRS2-like protein [Arabidopsis thaliana] >gi|38016015|gb|AAR07514.1| At5g16140 [Arabidopsis thaliana] >gi|51968726|dbj|BAD43055.1| CRS2-like protein [Arabidopsis thaliana] >gi|332004868|gb|AED92251.1| chloroplastic group IIB intron splicing facilitator CRS2-B [Arabidopsis thaliana] >gi|332004869|gb|AED92252.1| chloroplastic group IIB intron splicing facilitator CRS2-B [Arabidopsis thaliana])

HSP 1 Score: 175.637 bits (444), Expect = 2.410e-42
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEM+LPNGVLR+QPKGG GYHNGVKSVMGHLDG R FPRL IGIG PPG MDMKA+LLQ+FS +E+ QI+ AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+HKV
Sbjct:  133 IYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|357520293|ref|XP_003630435.1| (Chloroplastic group IIB intron splicing facilitator CRS2-B [Medicago truncatula] >gi|355524457|gb|AET04911.1| Chloroplastic group IIB intron splicing facilitator CRS2-B [Medicago truncatula])

HSP 1 Score: 173.711 bits (439), Expect = 9.160e-42
Identity = 77/108 (71.30%), Postives = 98/108 (90.74%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            VYDE SLP+GVL++QPKGGHG+HNG+K+V+GHLDG R+FPRL IGIGNPPGTMD++A+LLQ+FS+VER Q+D +L+QGV+AVRTLVLNGF+  +  FNL QKYKY++V
Sbjct:  136 VYDETSLPSGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVRTLVLNGFNHHVNRFNLGQKYKYNRV 243

[Close]

BLAST of MDP0000321752 vs. NCBI nr
Match: gi|90657669|gb|ABD96967.1| (hypothetical protein [Cleome spinosa])

HSP 1 Score: 166.392 bits (420), Expect = 1.462e-39
Identity = 75/108 (69.44%), Postives = 95/108 (87.96%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEMSLPNGVL++ PKGG+G+HNG+KSV+G+L+G R FPRLCIGIG PPG MD+KA+LLQ+FS VER Q+D  L+QG EAV+TLVLNGF++ I+ FNL QKYK+H+V
Sbjct:  150 IYDEMSLPNGVLKLIPKGGYGHHNGLKSVIGNLNGRRHFPRLCIGIGKPPGMMDLKAFLLQKFSPVERKQMDEGLEQGAEAVKTLVLNGFNEGISRFNLVQKYKFHRV 257

[Close]

BLAST of MDP0000321752 vs. Vitis vinifera
Match: GSVIVT01031009001 (assembled CDS)

HSP 1 Score: 190.274 bits (482), Expect = 1.435e-49
Identity = 88/108 (81.48%), Postives = 97/108 (89.81%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            VYDEM+LPNGVLR+ P+GGHGYHNG+K+VMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQ+FS  ER QIDAA +QG+ AVR LVLNGF+ S T FNL QKYKYHKV
Sbjct:  139 VYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKYHKV 246

[Close]

BLAST of MDP0000321752 vs. Vitis vinifera
Match: GSVIVT01025453001 (assembled CDS)

HSP 1 Score: 125.946 bits (315), Expect = 3.323e-30
Identity = 62/107 (57.94%), Postives = 76/107 (71.03%), Query Frame = 1

Query:    4 YDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +D+MSLP GVLR+  KGGHG HNG+KSV+ H  G REFPRL IGIG PPG MD KA+LLQ+FS   R +IDAAL +GV  ++ L   G  +S   FN  QKYK+ +V
Sbjct:  106 HDDMSLPCGVLRLHHKGGHGNHNGLKSVIYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFSATARERIDAALQEGVGVLKLLSSKGLTESARCFNTEQKYKHIRV 212

[Close]

BLAST of MDP0000321752 vs. Vitis vinifera
Match: GSVIVT01008257001 (assembled CDS)

HSP 1 Score: 110.153 bits (274), Expect = 1.887e-25
Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYH 318
            ++D++ LP   LR+ PKGGHG HNG++SV+ H  G R+FPRL IGIG PPG MD   ++L  FS  ER ++D     GVEAVR L+L GF++S +  N  +  + H
Sbjct:  200 IFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNKSASFVNTAKSLEQH 305

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 7.118e-44
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEM+LPNGVLR+QPKGG GYHNGVKSVMGHLDG R FPRL IGIG PPG MDMKA+LLQ+FS +E+ QI+ AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+HKV
Sbjct:  133 IYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 4.042e-39
Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YD+M L NGVLR+QPKGGH  HNG+K+V  HL+GCR +PRL IGIGNPPG MDMKA+LLQ+FS +ER Q+D  L+QGVE V+TLV  GF  SI+ FNL QKYK+HKV
Sbjct:  139 IYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.469e-38
Identity = 74/108 (68.52%), Postives = 90/108 (83.33%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YD+ SLPNGVLR+Q KGGHG HNG+++V+ HLDG REFPRL IGIG+PPG MD +A+LLQ+FS+ ER QID AL+QGV+AVRTLVL GF  S   FNL QKYK+H+V
Sbjct:  149 IYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0132800 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.897e-37
Identity = 75/108 (69.44%), Postives = 88/108 (81.48%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEMSLPNGVLR+Q KGGHG HNG+++VM  LD  RE PRL IGIG+PPG MD +A+LLQ+FS+ ER QID AL+QGV+AVRTLVL GF  SI  FNL QKYK+H V
Sbjct:  152 MYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.103e-28
Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHK 321
            V+D+M LP GVLR+Q KGGHG HNG+KSVM H  G REF RL IGIG PPG MD KA+LLQ+FS   R ++D AL +GV+A++ ++   F +S   FN+ QKYK+ K
Sbjct:  106 VHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: PTHC_ARATH (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana GN=At1g18440 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 2.153e-24
Identity = 50/101 (49.50%), Postives = 72/101 (71.29%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQ 303
            VYD++ LP G LR+ PKGGHG HNG++S++  L G R+FPRL IGIG PPG MD   ++L++F+  E+ ++D     G+EA+R L+L GF++S T  N R+
Sbjct:  182 VYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRK 282

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: PTHM_ORYSJ (Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os01g0693900 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.109e-23
Identity = 50/101 (49.50%), Postives = 70/101 (69.31%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQ 303
            +YD++ LP   LR+ PKGGHG HNGV+S++ HL   R+FPRL IGIG PPG MD   ++L+ F+  E+ ++D A  +G+EAVR + L GF++S T  N  Q
Sbjct:  143 MYDDLDLPFAKLRLLPKGGHGGHNGVRSIINHLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNKSATYVNTAQ 243

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: PTH_PELCD (Peptidyl-tRNA hydrolase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=pth PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.012e-18
Identity = 42/100 (42.00%), Postives = 68/100 (68.00%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLR 300
            ++DE+ LP G +RI+  GGHG HNG++S++  L GCR+F R+ +G+G P G +D+  Y+L +FS+ E+ Q+D  L+  V+A+  L+  G  Q++  FN R
Sbjct:   89 IHDEIDLPFGSIRIKVGGGHGGHNGLRSIVDLL-GCRDFLRVRMGVGRPQGQVDVAKYVLGQFSSTEKSQLDNVLENSVKALEVLLQKGAQQAMNEFNNR 187

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: PTH_CHLAD (Peptidyl-tRNA hydrolase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pth PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.827e-15
Identity = 40/98 (40.82%), Postives = 59/98 (60.20%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFN 294
            +YD++ LP   LR++ +G  G HNG++S++G L G  EFPRL IGIG PPG MD   Y+L RF+  E   +   L +  +AV  +V  G   ++  +N
Sbjct:   90 IYDDLDLPFAKLRLRERGSAGTHNGMRSIVGQL-GTTEFPRLRIGIGQPPGQMDAADYVLSRFTPEEEAVLPEVLARVADAVEVVVSEGLTAAMNRYN 186

[Close]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Match: PTH_GLOVI (Peptidyl-tRNA hydrolase OS=Gloeobacter violaceus (strain PCC 7421) GN=pth PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.070e-15
Identity = 40/100 (40.00%), Postives = 65/100 (65.00%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLR 300
            +YDE++LP G +R++P+G    HNG+KS++ HL G  +F RL IGIG  P    +  Y+L +F+  E+ Q+ A LD  VEAV  ++  G +++++ +N R
Sbjct:   92 LYDEVALPLGKIRLRPEGSAAGHNGIKSLIEHL-GTNQFARLRIGIGREPPPPVLTNYVLGKFAPEEQEQLPAILDGCVEAVEAVLAKGLEKAMSIYNAR 190

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: B9RSL9_RICCO (Peptidyl-tRNA hydrolase, putative OS=Ricinus communis GN=RCOM_1726890 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.933e-48
Identity = 89/108 (82.41%), Postives = 102/108 (94.44%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEMSLPNGV+R+QPKGGHG+HNGVKSVM HLDGCREFPRLCIGIGNPPGTMDM+A+LLQ+FS+ ER QIDAAL QG++AVRTLVL+GF+Q+IT FNL QKYKYHKV
Sbjct:  146 IYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRTLVLSGFNQNITRFNLGQKYKYHKV 253

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: B9H311_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_648034 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.637e-47
Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEM+LPNG+LR+QPKGGHG+HNGVKSVM HLDGCREFPRLCIGIGNPPGTMDMKA+LLQ+FS  ER QIDA+L+QGVEA+RTL+L GF   IT FNL QKYKYHKV
Sbjct:  137 IYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: D7TT16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g02750 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.061e-46
Identity = 88/108 (81.48%), Postives = 97/108 (89.81%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            VYDEM+LPNGVLR+ P+GGHGYHNG+K+VMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQ+FS  ER QIDAA +QG+ AVR LVLNGF+ S T FNL QKYKYHKV
Sbjct:  139 VYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKYHKV 246

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: I1N5A9_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.15701 PE=4 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.435e-44
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            V+DE SLPNGVLR+QPKGGHG+HNG+K+VMGHLDGC  FPRL +GIGNPPGTMD++AYLLQ+FS  ER QIDA+L+Q V AVRT+VLNGFDQ +  FNL QKYKYHKV
Sbjct:  137 VFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQHVNRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: C6TK07_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.435e-44
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            V+DE SLPNGVLR+QPKGGHG+HNG+K+VMGHLDGC  FPRL +GIGNPPGTMD++AYLLQ+FS  ER QIDA+L+Q V AVRT+VLNGFDQ +  FNL QKYKYHKV
Sbjct:  137 VFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQHVNRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: D7M817_ARALL (Peptidyl-tRNA hydrolase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488464 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.070e-42
Identity = 83/108 (76.85%), Postives = 94/108 (87.04%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEM+LPNGVLR+QPKGG GYHNGVKSVMGHLDG R FPRL IGIG PPG MDMKA+LLQ+FS +ER QID AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+H V
Sbjct:  132 LYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLERKQIDEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHNV 239

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: G7KUB5_MEDTR (Chloroplastic group IIB intron splicing facilitator CRS2-B OS=Medicago truncatula GN=MTR_7g082240 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.704e-42
Identity = 78/108 (72.22%), Postives = 98/108 (90.74%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            VYDE SLPNGVL++QPKGGHG+HNG+K+V+GHLDG R+FPRL IGIGNPPGTMD++A+LLQ+FS+VER Q+D +L+QGV+AV+TLVLNGF+  +  FNL QKYKY+KV
Sbjct:  144 VYDETSLPNGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVKTLVLNGFNHHVNRFNLGQKYKYNKV 251

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: G7LGI3_MEDTR (Chloroplastic group IIB intron splicing facilitator CRS2-B OS=Medicago truncatula GN=MTR_8g095500 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.027e-41
Identity = 77/108 (71.30%), Postives = 98/108 (90.74%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            VYDE SLP+GVL++QPKGGHG+HNG+K+V+GHLDG R+FPRL IGIGNPPGTMD++A+LLQ+FS+VER Q+D +L+QGV+AVRTLVLNGF+  +  FNL QKYKY++V
Sbjct:  136 VYDETSLPSGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVRTLVLNGFNHHVNRFNLGQKYKYNRV 243

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: Q1KUL9_9ROSI (Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.640e-39
Identity = 75/108 (69.44%), Postives = 95/108 (87.96%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEMSLPNGVL++ PKGG+G+HNG+KSV+G+L+G R FPRLCIGIG PPG MD+KA+LLQ+FS VER Q+D  L+QG EAV+TLVLNGF++ I+ FNL QKYK+H+V
Sbjct:  150 IYDEMSLPNGVLKLIPKGGYGHHNGLKSVIGNLNGRRHFPRLCIGIGKPPGMMDLKAFLLQKFSPVERKQMDEGLEQGAEAVKTLVLNGFNEGISRFNLVQKYKFHRV 257

[Close]

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Match: I1KZM5_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.233e-39
Identity = 73/98 (74.49%), Postives = 87/98 (88.78%), Query Frame = 1

Query:   31 VLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +LR+QPKGGHG+HNG+K+VMGHLDGC +FPRL +GIGNPPGTMD++AYLLQ+FS  ER QIDA+L+Q V AVRT+VLNGFDQ +  FNL QKYKYHKV
Sbjct:  106 ILRLQPKGGHGHHNGLKNVMGHLDGCSDFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVGAVRTVVLNGFDQHVNRFNLGQKYKYHKV 203

[Close]

BLAST of MDP0000321752 vs. TAIR10
Match: AT5G16140.2 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:5270308-5271517 REVERSE LENGTH=240)

HSP 1 Score: 175.637 bits (444), Expect = 5.422e-45
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEM+LPNGVLR+QPKGG GYHNGVKSVMGHLDG R FPRL IGIG PPG MDMKA+LLQ+FS +E+ QI+ AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+HKV
Sbjct:  133 IYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of MDP0000321752 vs. TAIR10
Match: AT5G16140.1 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:5270308-5271517 REVERSE LENGTH=240)

HSP 1 Score: 175.637 bits (444), Expect = 5.422e-45
Identity = 82/108 (75.93%), Postives = 95/108 (87.96%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEM+LPNGVLR+QPKGG GYHNGVKSVMGHLDG R FPRL IGIG PPG MDMKA+LLQ+FS +E+ QI+ AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+HKV
Sbjct:  133 IYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of MDP0000321752 vs. TAIR10
Match: AT5G38290.1 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:15303603-15305381 FORWARD LENGTH=246)

HSP 1 Score: 159.844 bits (403), Expect = 3.079e-40
Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YD+M L NGVLR+QPKGGH  HNG+K+V  HL+GCR +PRL IGIGNPPG MDMKA+LLQ+FS +ER Q+D  L+QGVE V+TLV  GF  SI+ FNL QKYK+HKV
Sbjct:  139 IYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

[Close]

BLAST of MDP0000321752 vs. TAIR10
Match: AT5G38290.2 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:15303491-15305381 FORWARD LENGTH=250)

HSP 1 Score: 159.844 bits (403), Expect = 3.079e-40
Identity = 73/108 (67.59%), Postives = 88/108 (81.48%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YD+M L NGVLR+QPKGGH  HNG+K+V  HL+GCR +PRL IGIGNPPG MDMKA+LLQ+FS +ER Q+D  L+QGVE V+TLV  GF  SI+ FNL QKYK+HKV
Sbjct:  143 IYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 250

[Close]

BLAST of MDP0000321752 vs. TAIR10
Match: AT5G19830.1 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219)

HSP 1 Score: 125.176 bits (313), Expect = 8.404e-30
Identity = 61/107 (57.01%), Postives = 78/107 (72.90%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHK 321
            V+D+M LP GVLR+Q KGGHG HNG+KSVM H  G REF RL IGIG PPG MD KA+LLQ+FS   R ++D AL +GV+A++ ++   F +S   FN+ QKYK+ K
Sbjct:  106 VHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212

[Close]

BLAST of MDP0000321752 vs. TAIR10
Match: AT1G18440.1 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr1:6345994-6347686 FORWARD LENGTH=288)

HSP 1 Score: 110.923 bits (276), Expect = 1.640e-25
Identity = 50/101 (49.50%), Postives = 72/101 (71.29%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQ 303
            VYD++ LP G LR+ PKGGHG HNG++S++  L G R+FPRL IGIG PPG MD   ++L++F+  E+ ++D     G+EA+R L+L GF++S T  N R+
Sbjct:  182 VYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRK 282

[Close]

BLAST of MDP0000321752 vs. Populus trichicarpa v2.0
Match: POPTR_0004s09730.1 ()

HSP 1 Score: 192.971 bits (489), Expect = 3.799e-50
Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +YDEM+LPNG+LR+QPKGGHG+HNGVKSVM HLDGCREFPRLCIGIGNPPGTMDMKA+LLQ+FS  ER QIDA+L+QGVEA+RTL+L GF   IT FNL QKYKYHKV
Sbjct:  137 IYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000321752 vs. Populus trichicarpa v2.0
Match: POPTR_0001s04230.2 ()

HSP 1 Score: 122.865 bits (307), Expect = 4.828e-29
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 1

Query:    4 YDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKY 315
            +D+M LP GVLR+Q KGGHG H G+KSV+ H  G REF RL IGIG PPG MD KA+LLQ+F+   R +IDAAL +GV A+R ++  G  ++   FN  QKYKY
Sbjct:   99 HDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDAALPEGVVALRCILFEGLTRTARWFNQEQKYKY 202

[Close]

BLAST of MDP0000321752 vs. Populus trichicarpa v2.0
Match: POPTR_0001s04230.1 ()

HSP 1 Score: 122.865 bits (307), Expect = 4.828e-29
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 1

Query:    4 YDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKY 315
            +D+M LP GVLR+Q KGGHG H G+KSV+ H  G REF RL IGIG PPG MD KA+LLQ+F+   R +IDAAL +GV A+R ++  G  ++   FN  QKYKY
Sbjct:  111 HDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDAALPEGVVALRCILFEGLTRTARWFNQEQKYKY 214

[Close]

BLAST of MDP0000321752 vs. Populus trichicarpa v2.0
Match: POPTR_0012s05820.1 ()

HSP 1 Score: 108.227 bits (269), Expect = 1.231e-24
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFN 294
            +YD++ LP   LR+ PKGGHG HNG+KSV+ H  G R+FPRL IGIG PPG MD   ++L+ F+  E  ++D    QG+EAVR L+L G ++S T  N
Sbjct:  165 IYDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNRDFPRLRIGIGRPPGKMDTANFVLRPFTKQEHEELDFMFQQGIEAVRILLLEGLNKSATFVN 262

[Close]

BLAST of MDP0000321752 vs. Populus trichicarpa v2.0
Match: POPTR_0001s04230.3 ()

HSP 1 Score: 90.5077 bits (223), Expect = 2.655e-19
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 1

Query:    4 YDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQ 210
            +D+M LP GVLR+Q KGGHG H G+KSV+ H  G REF RL IGIG PPG MD KA+LLQ+F+   R +
Sbjct:  111 HDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARER 179

[Close]

BLAST of MDP0000321752 vs. Populus trichicarpa v2.0
Match: POPTR_1290s00200.1 ()

HSP 1 Score: 54.6842 bits (130), Expect = 1.615e-8
Identity = 20/25 (80.00%), Postives = 25/25 (100.00%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNG 75
            +YDEM+LPNG+LR+QPKGGHG+HNG
Sbjct:  137 IYDEMNLPNGILRVQPKGGHGHHNG 161

[Close]

BLAST of MDP0000321752 vs. GDR
Match: ppa010513m ()

HSP 1 Score: 226.868 bits (577), Expect = 1.630e-60
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV
Sbjct:  140 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 247

[Close]

BLAST of MDP0000321752 vs. GDR
Match: ppa011211m ()

HSP 1 Score: 126.716 bits (317), Expect = 2.296e-30
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 1

Query:    4 YDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 324
            +D+M+LP GVLR+ P GGHG HNGVKSVM H  G REFPRL IGIG PPG MD KA+LLQ+F+   + +IDAAL +GV+ ++ L+  G  +S   FN  QKYK+ ++
Sbjct:  107 HDDMNLPCGVLRLHPNGGHGCHNGVKSVMYHFRGNREFPRLRIGIGRPPGQMDPKAFLLQKFNATAQGRIDAALQEGVDILKVLLSEGLAESARRFNSEQKYKHMRL 213

[Close]

BLAST of MDP0000321752 vs. GDR
Match: ppa010131m ()

HSP 1 Score: 103.605 bits (257), Expect = 2.081e-23
Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 1

Query:    1 VYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFN 294
            ++D++ LP   LR+ PKGGHG HNG++SV+ H  G R+FPRL IGIG PPG MD   ++L+ F+  E  +++     GVEAVR L+L GF++S T  N
Sbjct:  156 IFDDLDLPFAKLRLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDPVNFVLRPFTKQELEELNFTFQDGVEAVRILLLEGFNKSATFVN 253

The following BLAST results are available for this feature:

BLAST of MDP0000321752 vs. NCBI nr
BLAST of MDP0000321752 vs. Vitis vinifera
BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
BLAST of MDP0000321752 vs. ExPASy TrEMBL
BLAST of MDP0000321752 vs. TAIR10
BLAST of MDP0000321752 vs. Populus trichicarpa v2.0
BLAST of MDP0000321752 vs. GDR

BLAST of MDP0000321752 vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs NCBI nr)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|255551384\|ref\|XP_002516738.1\|	1.723e-48	82.41	peptidyl-tRNA hydrolase, putative [Ricinus communi...	[more]
gi\|224079329\|ref\|XP_002305823.1\|	1.459e-47	80.56	predicted protein [Populus trichocarpa] >gi\|222848...	[more]
gi\|225452074\|ref\|XP_002284030.1\|	9.457e-47	81.48	PREDICTED: chloroplastic group IIB intron splicing...	[more]
gi\|358248120\|ref\|NP_001239818.1\|	5.737e-44	75.93	uncharacterized protein LOC100804132 [Glycine max]...	[more]
gi\|388501072\|gb\|AFK38602.1\|	3.719e-43	75.00	unknown [Lotus japonicus]	[more]
gi\|297811751\|ref\|XP_002873759.1\|	1.846e-42	76.85	peptidyl-tRNA hydrolase family protein [Arabidopsi...	[more]
gi\|357508117\|ref\|XP_003624347.1\|	2.410e-42	72.22	Chloroplastic group IIB intron splicing facilitato...	[more]
gi\|15237280\|ref\|NP_197118.1\|	2.410e-42	75.93	chloroplastic group IIB intron splicing facilitato...	[more]
gi\|357520293\|ref\|XP_003630435.1\|	9.160e-42	71.30	Chloroplastic group IIB intron splicing facilitato...	[more]
gi\|90657669\|gb\|ABD96967.1\|	1.462e-39	69.44	hypothetical protein [Cleome spinosa]	[more]

Pages

BLAST of MDP0000321752 vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Vitis vinifera)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01031009001	1.435e-49	81.48	assembled CDS	[more]
GSVIVT01025453001	3.323e-30	57.94	assembled CDS	[more]
GSVIVT01008257001	1.887e-25	48.11	assembled CDS	[more]

BLAST of MDP0000321752 vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt Swiss-Prot)
Total hits: 25


Match Name	E-value	Identity	Description
CRS2B_ARATH	7.118e-44	75.93	Chloroplastic group IIB intron splicing facilitato...	[more]
CRS2A_ARATH	4.042e-39	67.59	Chloroplastic group IIB intron splicing facilitato...	[more]
CRS2_MAIZE	4.469e-38	68.52	Chloroplastic group IIB intron splicing facilitato...	[more]
CRS2_ORYSJ	2.897e-37	69.44	Chloroplastic group IIB intron splicing facilitato...	[more]
PTHM_ARATH	1.103e-28	57.01	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidop...	[more]
PTHC_ARATH	2.153e-24	49.50	Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidop...	[more]
PTHM_ORYSJ	3.109e-23	49.50	Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sa...	[more]
PTH_PELCD	3.012e-18	42.00	Peptidyl-tRNA hydrolase OS=Pelobacter carbinolicus...	[more]
PTH_CHLAD	1.827e-15	40.82	Peptidyl-tRNA hydrolase OS=Chloroflexus aggregans ...	[more]
PTH_GLOVI	4.070e-15	40.00	Peptidyl-tRNA hydrolase OS=Gloeobacter violaceus (...	[more]

Pages

BLAST of MDP0000321752 vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
B9RSL9_RICCO	1.933e-48	82.41	Peptidyl-tRNA hydrolase, putative OS=Ricinus commu...	[more]
B9H311_POPTR	1.637e-47	80.56	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TT16_VITVI	1.061e-46	81.48	Putative uncharacterized protein OS=Vitis vinifera...	[more]
I1N5A9_SOYBN	6.435e-44	75.93	Uncharacterized protein OS=Glycine max GN=Gma.1570...	[more]
C6TK07_SOYBN	6.435e-44	75.93	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7M817_ARALL	2.070e-42	76.85	Peptidyl-tRNA hydrolase family protein OS=Arabidop...	[more]
G7KUB5_MEDTR	2.704e-42	72.22	Chloroplastic group IIB intron splicing facilitato...	[more]
G7LGI3_MEDTR	1.027e-41	71.30	Chloroplastic group IIB intron splicing facilitato...	[more]
Q1KUL9_9ROSI	1.640e-39	69.44	Putative uncharacterized protein OS=Cleome spinosa...	[more]
I1KZM5_SOYBN	6.233e-39	74.49	Uncharacterized protein (Fragment) OS=Glycine max ...	[more]

Pages

BLAST of MDP0000321752 vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs TAIR 10)
Total hits: 6


Match Name	E-value	Identity	Description
AT5G16140.2	5.422e-45	75.93	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT5G16140.1	5.422e-45	75.93	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT5G38290.1	3.079e-40	67.59	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT5G38290.2	3.079e-40	67.59	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT5G19830.1	8.404e-30	57.01	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT1G18440.1	1.640e-25	49.50	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]

BLAST of MDP0000321752 vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Populus trichocarpa v2.0)
Total hits: 6


Match Name	E-value	Identity
POPTR_0004s09730.1	3.799e-50	80.56	[more]
POPTR_0001s04230.2	4.828e-29	56.73	[more]
POPTR_0001s04230.1	4.828e-29	56.73	[more]
POPTR_0012s05820.1	1.231e-24	51.02	[more]
POPTR_0001s04230.3	2.655e-19	60.87	[more]
POPTR_1290s00200.1	1.615e-8	80.00	[more]

BLAST of MDP0000321752 vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Prunus persica v1.0)
Total hits: 3


Match Name	E-value	Identity
ppa010513m	1.630e-60	100.00	[more]
ppa011211m	2.296e-30	56.07	[more]
ppa010131m	2.081e-23	48.98	[more]

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001328	Peptidyl-tRNA hydrolase	GENE3D	3.40.50.1470	no description	coord: 1..103 score: 1.2
IPR001328	Peptidyl-tRNA hydrolase	PANTHER	PTHR17224	FAMILY NOT NAMED	coord: 1..105 score: 7.7
IPR001328	Peptidyl-tRNA hydrolase	PFAM	PF01195	Pept_tRNA_hydro	coord: 1..98 score: 2.1
IPR001328	Peptidyl-tRNA hydrolase	SUPERFAMILY	53178	Peptidyl-tRNA hydrolase-like	coord: 1..101 score: 1.3
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01196	PEPT_TRNA_HYDROL_2	coord: 19..29 score
None	No IPR available	SEG	seg	seg	coord: 31..49 score

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA from alignment at chr17:20178772..20181067+
mRNA from alignment at MDC019111.173:494..2789+
coding sequence from alignment at MDC019111.173:494..2789+

mRNA sequence

>MDP0000321752 ID=MDP0000321752; Name=MDP0000321752; organism=Malus x domestica; type=mRNA; length=2296bp
GTTTACGATGAGATGAGCTTACCAAATGGTGTTCTGAGGATTCAGCCAAA
AGGTGGTCATGGCTATCACAATGGGTATGTGTGAATATTAATTTTGAACA
GAATTCATATGAAAATTTATCTATCACTTTCCTCTGTTCTTGAATAAATA
TGTTTTCAAAATCAAGAAAAAGTAGTTTGATTCTTTTATCTCTTAACGAT
GCATAATGTTAGTTTGTCCAACTAGTTTCTGACTTAGAATTGAAGATTCT
ATAACTAACATACTAAATGAGGTGGATTCTATAGTAAATTATATTTTCCG
TGTTATGTTCTAATTGATGTCTTTCACGAGAGCTGCTAAATTAACCGTGT
TGAAATTCCTAATGAACAAGTATTAAAGACAGTTTCTCAATTTTTGCATT
CTGTATCCTGTGAAGGTACGTTTGCACAGATGCTTTCTGTAGTCCATTGT
TAGTAAGTTTTCATGTACCATTGTGACTAAGTTCCATGCTTATTAAGAAG
GATATGGAGCAGGAATCTTACTAGATTCAATTAGAGATGTATTAGTGGTG
ATGTCATAAGAAGAAGTTAAGTAAGGGGTTTGAGGTTCTTAGTGTTGGCT
GAATAGCAAGTGGATGAAGAAACACCCTGTTCGTGTCCTTTTATCTATAG
ATTCCGAACTAGAAATTAAATAAACATTATACTGATTCTAGAAAGGGATA
CTTCAGTCTCAAATTTTAGCTACCCATACTTAATTTGACGGGTTTGACAG
TTTGGCTACAGAAAACCGAKATTTTTYCTGTAGATTGTTTAGTTGTTTAC
MTTTAAGCCTTTATTTCMTTGCAAAATCAAAGGGTAACYATGCATCACTT
TGTTTTTTTTGGTTACAACYATGCATCACTTTTCCTTGATATGCTTAGRA
AAAAAGAAAAAGCCAATCTGGCTCRGATGATTTAGTWTAGAAGGAAGCAA
AGACTATACATAGTCTTTCCGGGGTTGTTTGTTTGAAATCYTCTCWAAAC
AAATCTTTCCCTTTTCCATACAGTTAGAGCTTTAAAAGTCCAAATGAATT
TMAATTGCTCTTCTCAGAATCTTGTAGAAAAATGGWAGAGTCGGGGCACA
CTCAAAGTTGTTGATATGTGTGCTACTGGGTTTTATGTGMATTTGTGGTT
AGGTGAAGTTATAGACTGGAGGTTGTTTGATAATATTGGAAGTGRCAACA
GTAACATTTTATCTGYCTCAGAAAAATTGTGCTTGGCGTGGATCATTTGA
AAGTCAAACTCTTCTCTAGCTTGTTAGSGTTGCATATTTTCCTGTCCTTA
TTAAACCACTACTTTTTTATCTGCCATTTAYGTTCCCTGATTCTTGTTTA
CCCAATGCTTGGCCATGAAGAAARGAAAAGATTTAACCCAACTCGTACTG
CCCCTAACCAAAATTACATTTTGTTCTTATTAGCTTTCTMTTGRTAAGCA
AACGCAAAAAAWATTARWASTTCTGTTTCTTTTGTTTCTTCCTCTTTTTC
TCTCTTATTTTCTCTKCTCTCTAGTTGAAAGCATACGGAAGGCAGGAAGG
AAAGAAWATAATTATGAACAGCTTGAACTTRATTGTCYTGTGACACATTC
TTTYAGAAATGCTGATCCACGTAACTCCRTATCAGGCAATACAAAACTGA
KTAATAACGYGTCTGCTGAATCCCGCTYCTCTCATGTTCCAAWCTTTTTA
TAATTGYTTTCTCCTTGTTGCAGTGTAAAAAGTGTAATGGGCCATCTGGA
CGGTTGYCGTGAATTTCCTCGGCTGTGTATAGGTTTGTTTCTTCAGTAST
ATTTTCAACYRWTRGTTARGTGTCTTAGTCCAAAAGGGTCTATACTTGCC
TTAATTGGAAACTAAAAGAGGAGTATGAATTATGTTTCAGGTATTGGAAA
TCCACCTGGAACTATGGACATGAAAGCCTATCTTCTACAGAGATTCAGTA
CAGTCGAGAGACATCAGGTWTATCGTYGTTTCTAAATAGTTCTGACTCAT
GGTATTAAGGAAATTCATTGATCACTTAAATGGTCAGAAAATATTTGCTT
GCCCACACGCTCGCCATGCACATTCAAATGTTCACGCATCTGCAATTTAC
RTTGTCTGTTCACTTGAATTGGTGTGAATTTCAACCTGTAATATCAAATT
TGACCRATATCTGCTATATATGTGAACAGATTGATGCAGCACTGGATCAA
GGGGTTGAAGCTGTAAGGACCCTGGTGCTGAATGGATTTGACCAGAGCAT
CACTAGTTTTAATTTGAGGCAGAAATACAAATATCACAAAGTGTAA

mRNA from alignment at chr17:20178772..20181067+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000321752 ID=MDP0000321752; Name=MDP0000321752; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr17:20178772..20181067+ (Malus x domestica

mRNA from alignment at MDC019111.173:494..2789+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000321752 ID=MDP0000321752; Name=MDP0000321752; organism=Malus x domestica; type=mRNA; length=2296bp; location=Sequence derived from: MDC019111.173:494..2789+ (Malus x domestica
GTTTACGATGAGATGAGCTTACCAAATGGTGTTCTGAGGATTCAGCCAAA
AGGTGGTCATGGCTATCACAATGGGTATGTGTGAATATTAATTTTGAACA
GAATTCATATGAAAATTTATCTATCACTTTCCTCTGTTCTTGAATAAATA
TGTTTTCAAAATCAAGAAAAAGTAGTTTGATTCTTTTATCTCTTAACGAT
GCATAATGTTAGTTTGTCCAACTAGTTTCTGACTTAGAATTGAAGATTCT
ATAACTAACATACTAAATGAGGTGGATTCTATAGTAAATTATATTTTCCG
TGTTATGTTCTAATTGATGTCTTTCACGAGAGCTGCTAAATTAACCGTGT
TGAAATTCCTAATGAACAAGTATTAAAGACAGTTTCTCAATTTTTGCATT
CTGTATCCTGTGAAGGTACGTTTGCACAGATGCTTTCTGTAGTCCATTGT
TAGTAAGTTTTCATGTACCATTGTGACTAAGTTCCATGCTTATTAAGAAG
GATATGGAGCAGGAATCTTACTAGATTCAATTAGAGATGTATTAGTGGTG
ATGTCATAAGAAGAAGTTAAGTAAGGGGTTTGAGGTTCTTAGTGTTGGCT
GAATAGCAAGTGGATGAAGAAACACCCTGTTCGTGTCCTTTTATCTATAG
ATTCCGAACTAGAAATTAAATAAACATTATACTGATTCTAGAAAGGGATA
CTTCAGTCTCAAATTTTAGCTACCCATACTTAATTTGACGGGTTTGACAG
TTTGGCTACAGAAAACCGAKATTTTTYCTGTAGATTGTTTAGTTGTTTAC
MTTTAAGCCTTTATTTCMTTGCAAAATCAAAGGGTAACYATGCATCACTT
TGTTTTTTTTGGTTACAACYATGCATCACTTTTCCTTGATATGCTTAGRA
AAAAAGAAAAAGCCAATCTGGCTCRGATGATTTAGTWTAGAAGGAAGCAA
AGACTATACATAGTCTTTCCGGGGTTGTTTGTTTGAAATCYTCTCWAAAC
AAATCTTTCCCTTTTCCATACAGTTAGAGCTTTAAAAGTCCAAATGAATT
TMAATTGCTCTTCTCAGAATCTTGTAGAAAAATGGWAGAGTCGGGGCACA
CTCAAAGTTGTTGATATGTGTGCTACTGGGTTTTATGTGMATTTGTGGTT
AGGTGAAGTTATAGACTGGAGGTTGTTTGATAATATTGGAAGTGRCAACA
GTAACATTTTATCTGYCTCAGAAAAATTGTGCTTGGCGTGGATCATTTGA
AAGTCAAACTCTTCTCTAGCTTGTTAGSGTTGCATATTTTCCTGTCCTTA
TTAAACCACTACTTTTTTATCTGCCATTTAYGTTCCCTGATTCTTGTTTA
CCCAATGCTTGGCCATGAAGAAARGAAAAGATTTAACCCAACTCGTACTG
CCCCTAACCAAAATTACATTTTGTTCTTATTAGCTTTCTMTTGRTAAGCA
AACGCAAAAAAWATTARWASTTCTGTTTCTTTTGTTTCTTCCTCTTTTTC
TCTCTTATTTTCTCTKCTCTCTAGTTGAAAGCATACGGAAGGCAGGAAGG
AAAGAAWATAATTATGAACAGCTTGAACTTRATTGTCYTGTGACACATTC
TTTYAGAAATGCTGATCCACGTAACTCCRTATCAGGCAATACAAAACTGA
KTAATAACGYGTCTGCTGAATCCCGCTYCTCTCATGTTCCAAWCTTTTTA
TAATTGYTTTCTCCTTGTTGCAGTGTAAAAAGTGTAATGGGCCATCTGGA
CGGTTGYCGTGAATTTCCTCGGCTGTGTATAGGTTTGTTTCTTCAGTAST
ATTTTCAACYRWTRGTTARGTGTCTTAGTCCAAAAGGGTCTATACTTGCC
TTAATTGGAAACTAAAAGAGGAGTATGAATTATGTTTCAGGTATTGGAAA
TCCACCTGGAACTATGGACATGAAAGCCTATCTTCTACAGAGATTCAGTA
CAGTCGAGAGACATCAGGTWTATCGTYGTTTCTAAATAGTTCTGACTCAT
GGTATTAAGGAAATTCATTGATCACTTAAATGGTCAGAAAATATTTGCTT
GCCCACACGCTCGCCATGCACATTCAAATGTTCACGCATCTGCAATTTAC
RTTGTCTGTTCACTTGAATTGGTGTGAATTTCAACCTGTAATATCAAATT
TGACCRATATCTGCTATATATGTGAACAGATTGATGCAGCACTGGATCAA
GGGGTTGAAGCTGTAAGGACCCTGGTGCTGAATGGATTTGACCAGAGCAT
CACTAGTTTTAATTTGAGGCAGAAATACAAATATCACAAAGTGTAA

Coding sequence (CDS) from alignment at MDC019111.173:494..2789+

>MDP0000321752 ID=MDP0000321752; Name=MDP0000321752; organism=Malus x domestica; type=CDS; length=327bp; location=Sequence derived from: MDC019111.173:494..2789+ (Malus x domestica
GTTTACGATGAGATGAGCTTACCAAATGGTGTTCTGAGGATTCAGCCAAA
AGGTGGTCATGGCTATCACAATGGTGTAAAAAGTGTAATGGGCCATCTGG
ACGGTTGYCGTGAATTTCCTCGGCTGTGTATAGGTATTGGAAATCCACCT
GGAACTATGGACATGAAAGCCTATCTTCTACAGAGATTCAGTACAGTCGA
GAGACATCAGATTGATGCAGCACTGGATCAAGGGGTTGAAGCTGTAAGGA
CCCTGGTGCTGAATGGATTTGACCAGAGCATCACTAGTTTTAATTTGAGG
CAGAAATACAAATATCACAAAGTGTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001328	Pept_tRNA_hydro
IPR018171	Pept_tRNA_hydro_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0004045	aminoacyl-tRNA hydrolase activity