MDP0000435964, MDP0000435964 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000435964
Unique Name	MDP0000435964
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	3870

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr17	chromosome	chr17:20206120..20209989 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC016058.80	contig	MDC016058.80:21764..25633 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs NCBI nr	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs Vitis vinifera	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs UniProt Swiss-Prot	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs UniProt TrEMBL	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs TAIR 10	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs Populus trichocarpa v2.0	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs Prunus persica v1.0	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000435964_exon_1	MDP0000435964_exon_1	Malus x domestica	CDS
MDP0000435964_exon_2	MDP0000435964_exon_2	Malus x domestica	CDS
MDP0000435964_exon_3	MDP0000435964_exon_3	Malus x domestica	CDS
MDP0000435964_exon_4	MDP0000435964_exon_4	Malus x domestica	CDS
MDP0000435964_exon_5	MDP0000435964_exon_5	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000435964	MDP0000435964	Malus x domestica	polypeptide

Homology

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|224079329|ref|XP_002305823.1| (predicted protein [Populus trichocarpa] >gi|222848787|gb|EEE86334.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 260.766 bits (665), Expect = 9.091e-68
Identity = 143/247 (57.89%), Postives = 160/247 (64.78%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M YAVS P  CIS PR   S    R+  VS    V+A LPDN NG KVEYTPWLIVGLGNPG KYHGTRHN+GFEMID IA+AEG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNG+LR+QPKGGHG+HNG  + +              GIGNPPGTMDMKA+LLQ+FS  ER QIDA+L+QGVEA+RTL+L GF   IT FNL QKYKYHKV
Sbjct:    1 MLYAVSTPRTCISCPR---SSRFHRRNLVSVRLCVRASLPDNANGVKVEYTPWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|388501072|gb|AFK38602.1| (unknown [Lotus japonicus])

HSP 1 Score: 258.07 bits (658), Expect = 5.892e-67
Identity = 131/247 (53.04%), Postives = 162/247 (65.59%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIGGSS------------------------------------VYDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M +A SAP+ C+SYPR    P +L K+   T   V+  +P   NGA+VEYTPWL+VGLGNPG+KYHGTRHN+GFE+ID +++AEGI MNTIQSKALIG+G                                       VYDE SLPNGVLR+QPKGGHG+HNGS N +              GIGNPPG+MD +A+LLQ+FS+VER QID +L+QGV+A+RTLVL+GF Q ++ FNL QKYKYHKV
Sbjct:    1 MLHAASAPSLCLSYPRNLHYPSNLTKHPAKTRFSVRCSVPGTKNGAQVEYTPWLVVGLGNPGSKYHGTRHNVGFEIIDSLSRAEGILMNTIQSKALIGLGSIGDVPVLLAKPQTYMNFSGEAVGPLAAYYRIPLRHIILVYDETSLPNGVLRLQPKGGHGHHNGSKNVMGHLDGSRDFPRLAIGIGNPPGSMDSRAFLLQKFSSVERQQIDDSLEQGVQAIRTLVLHGFSQHVSRFNLGQKYKYHKV 247

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|255551384|ref|XP_002516738.1| (peptidyl-tRNA hydrolase, putative [Ricinus communis] >gi|223544111|gb|EEF45636.1| peptidyl-tRNA hydrolase, putative [Ricinus communis])

HSP 1 Score: 257.299 bits (656), Expect = 1.005e-66
Identity = 144/256 (56.25%), Postives = 166/256 (64.84%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNG-AKVEYTPWLIVGLGNPGNKYHGTRHNI--------GFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M YAVS PN CIS PR     P   ++  ST   ++  LP+N NG AK+EYTPWLIVGLGNPGNKYHGTRHN+        GFEMID IAKAE +AMNTIQSKALIGIG                   G SV                 YDEMSLPNGV+R+QPKGGHG+HNG  + +              GIGNPPGTMDM+A+LLQ+FS+ ER QIDAAL QG++AVRTLVL+GF+Q+IT FNL QKYKYHKV
Sbjct:    1 MLYAVSTPNTCISCPRNSFFRP---RHLASTRLSIRVSLPENGNGVAKIEYTPWLIVGLGNPGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAMNTIQSKALIGIGCIKEVPILLVKPQAYMNFSGESVGPLAAHYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRTLVLSGFNQNITRFNLGQKYKYHKV 253

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|358248120|ref|NP_001239818.1| (uncharacterized protein LOC100804132 [Glycine max] >gi|255645504|gb|ACU23247.1| unknown [Glycine max])

HSP 1 Score: 253.447 bits (646), Expect = 1.451e-65
Identity = 136/247 (55.06%), Postives = 160/247 (64.78%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M +AVSAP++C+SYP     PPS  +    T   V+  +    NGAKVEYTPWLI+GLGNPGNKYHGTRHN+GFE+ID +++AEGI MNTIQSKALIGIG                   G SV                 +DE SLPNGVLR+QPKGGHG+HNG  N +              GIGNPPGTMD++AYLLQ+FS  ER QIDA+L+Q V AVRT+VLNGFDQ +  FNL QKYKYHKV
Sbjct:    1 MLHAVSAPSFCLSYPGNLHYPPSSVQ---KTCFSVRCSVSQTKNGAKVEYTPWLIIGLGNPGNKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKPQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQHVNRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|225452074|ref|XP_002284030.1| (PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic [Vitis vinifera] >gi|296087264|emb|CBI33638.3| unnamed protein product [Vitis vinifera])

HSP 1 Score: 239.58 bits (610), Expect = 2.169e-61
Identity = 138/247 (55.87%), Postives = 152/247 (61.54%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M YAVS P+  IS  R        R+        V A LPD  NG KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID I++ EGI +NTIQSKALIGIG                   G SV                 YDEM+LPNGVLR+ P+GGHGYHNG  N +              GIGNPPGTMDMKAYLLQ+FS  ER QIDAA +QG+ AVR LVLNGF+ S T FNL QKYKYHKV
Sbjct:    1 MLYAVSGPSTSISCRRSLDYHGFRRRRLAPARLCVSASLPD-ANGIKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAYYQVPLRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKYHKV 246

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|357508117|ref|XP_003624347.1| (Chloroplastic group IIB intron splicing facilitator CRS2-B [Medicago truncatula] >gi|355499362|gb|AES80565.1| Chloroplastic group IIB intron splicing facilitator CRS2-B [Medicago truncatula])

HSP 1 Score: 228.409 bits (581), Expect = 5.000e-58
Identity = 126/251 (50.20%), Postives = 160/251 (63.75%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLR-KYSVSTSX-RVKAXLPD-NTNGA-KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M +  S+P   ++YP +         K++V TS   V+  +P  N NG  K+EYTPWL+VGLGNPGNKYHGTRHN+GFE+ID ++++EGI MNTIQSKALIGIG                   G SV                 YDE SLPNGVL++QPKGGHG+HNG  N +              GIGNPPGTMD++A+LLQ+FS+VER Q+D +L+QGV+AV+TLVLNGF+  +  FNL QKYKY+KV
Sbjct:    1 MLHLASSPTLSLTYPNKNLQHIRYTTKFAVKTSSFSVRCSVPQANNNGDNKMEYTPWLVVGLGNPGNKYHGTRHNVGFEIIDSLSQSEGILMNTIQSKALIGIGSIGEVPVLLAKPQTYMNFSGESVGPLAAYYRVPLRHILVVYDETSLPNGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVKTLVLNGFNHHVNRFNLGQKYKYNKV 251

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|357520293|ref|XP_003630435.1| (Chloroplastic group IIB intron splicing facilitator CRS2-B [Medicago truncatula] >gi|355524457|gb|AET04911.1| Chloroplastic group IIB intron splicing facilitator CRS2-B [Medicago truncatula])

HSP 1 Score: 220.32 bits (560), Expect = 1.362e-55
Identity = 115/218 (52.75%), Postives = 144/218 (66.06%), Query Frame = 1

Query:   88 STSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            ST   V+  LP+  N  K+EYTPWL+VGLGNPGNKYH TRHN+GFE+ID +++++GI MNTIQSKALIGIG                   G SV                 YDE SLP+GVL++QPKGGHG+HNG  N +              GIGNPPGTMD++A+LLQ+FS+VER Q+D +L+QGV+AVRTLVLNGF+  +  FNL QKYKY++V
Sbjct:   28 STKFSVRCSLPNGDN--KLEYTPWLVVGLGNPGNKYHATRHNVGFEIIDSLSQSQGILMNTIQSKALIGIGSIGEVPVLLAKPQTYMNFSGESVGPLAAYYRVPLRHILVVYDETSLPSGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVRTLVLNGFNHHVNRFNLGQKYKYNRV 243

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|297811751|ref|XP_002873759.1| (peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp. lyrata] >gi|297319596|gb|EFH50018.1| peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 218.779 bits (556), Expect = 3.962e-55
Identity = 117/201 (58.21%), Postives = 133/201 (66.17%), Query Frame = 1

Query:  139 KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID +A+ EG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNGVLR+QPKGG GYHNG  + +              GIG PPG MDMKA+LLQ+FS +ER QID AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+H V
Sbjct:   39 KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLVKPQTYMNFSGESVGSLASHYRVPLRHILMLYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLERKQIDEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHNV 239

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|297805938|ref|XP_002870853.1| (predicted protein [Arabidopsis lyrata subsp. lyrata] >gi|297316689|gb|EFH47112.1| predicted protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 218.394 bits (555), Expect = 5.174e-55
Identity = 127/247 (51.42%), Postives = 147/247 (59.51%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M+ + S P   + YP+    P S R  S+      +A LP + N  KVEYTPWLIVGLGNPG KY+GTRHNIGFEMID IA+A  I+MNTIQSKAL+GIG                   G SV                 YD+M LPNGVLR+QPKGGH  HNG  N                GIGNPPG MDMKA+LLQ+FS +ER QIDA L+QGVE V+TLV  GF  SI+ FNL QKYK+H V
Sbjct:    1 MFCSSSPPITSLLYPKAQKKPNSKRFSSL------RASLPVSDNKLKVEYTPWLIVGLGNPGFKYYGTRHNIGFEMIDHIARATEISMNTIQSKALVGIGSVGEVPILLVKPQAYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLPNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQIDAGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHTV 241

[Close]

BLAST of MDP0000435964 vs. NCBI nr
Match: gi|15237280|ref|NP_197118.1| (chloroplastic group IIB intron splicing facilitator CRS2-B [Arabidopsis thaliana] >gi|145334495|ref|NP_001078593.1| chloroplastic group IIB intron splicing facilitator CRS2-B [Arabidopsis thaliana] >gi|75311128|sp|Q9LF14.1|CRS2B_ARATH RecName: Full=Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic; AltName: Full=CRS2-like protein B; AltName: Full=Chloroplastic RNA splicing factor 2-B; Flags: Precursor >gi|9755824|emb|CAC01855.1| CRS2-like protein [Arabidopsis thaliana] >gi|38016015|gb|AAR07514.1| At5g16140 [Arabidopsis thaliana] >gi|51968726|dbj|BAD43055.1| CRS2-like protein [Arabidopsis thaliana] >gi|332004868|gb|AED92251.1| chloroplastic group IIB intron splicing facilitator CRS2-B [Arabidopsis thaliana] >gi|332004869|gb|AED92252.1| chloroplastic group IIB intron splicing facilitator CRS2-B [Arabidopsis thaliana])

HSP 1 Score: 217.624 bits (553), Expect = 8.825e-55
Identity = 116/201 (57.71%), Postives = 134/201 (66.67%), Query Frame = 1

Query:  139 KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID +A+ EG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNGVLR+QPKGG GYHNG  + +              GIG PPG MDMKA+LLQ+FS +E+ QI+ AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+HKV
Sbjct:   40 KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of MDP0000435964 vs. Vitis vinifera
Match: GSVIVT01031009001 (assembled CDS)

HSP 1 Score: 239.58 bits (610), Expect = 6.698e-64
Identity = 138/247 (55.87%), Postives = 152/247 (61.54%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M YAVS P+  IS  R        R+        V A LPD  NG KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID I++ EGI +NTIQSKALIGIG                   G SV                 YDEM+LPNGVLR+ P+GGHGYHNG  N +              GIGNPPGTMDMKAYLLQ+FS  ER QIDAA +QG+ AVR LVLNGF+ S T FNL QKYKYHKV
Sbjct:    1 MLYAVSGPSTSISCRRSLDYHGFRRRRLAPARLCVSASLPD-ANGIKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAYYQVPLRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKYHKV 246

[Close]

BLAST of MDP0000435964 vs. Vitis vinifera
Match: GSVIVT01025453001 (assembled CDS)

HSP 1 Score: 147.132 bits (370), Expect = 4.524e-36
Identity = 83/196 (42.35%), Postives = 106/196 (54.08%), Query Frame = 1

Query:  154 PWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            PWL VGLGNPG+KY GTRHN+GFEMI+  A+++GI M+T+  KA+ G G                   G S                  +D+MSLP GVLR+  KGGHG HNG  + +              GIG PPG MD KA+LLQ+FS   R +IDAAL +GV  ++ L   G  +S   FN  QKYK+ +V
Sbjct:   17 PWLFVGLGNPGDKYKGTRHNVGFEMINAFAESQGIPMDTVHCKAIFGQGFVDAVPVFLAKPQTYMNLSGESAGPLAAYYKLPLNRVVVFHDDMSLPCGVLRLHHKGGHGNHNGLKSVIYHFRGNREFPRLRIGIGKPPGQMDPKAFLLQKFSATARERIDAALQEGVGVLKLLSSKGLTESARCFNTEQKYKHIRV 212

[Close]

BLAST of MDP0000435964 vs. Vitis vinifera
Match: GSVIVT01008257001 (assembled CDS)

HSP 1 Score: 136.732 bits (343), Expect = 6.114e-33
Identity = 76/194 (39.18%), Postives = 103/194 (53.09%), Query Frame = 1

Query:  154 PWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYH 588
            PWL+VGLGNPG KY+GTRHN+GFEM+D IA+AEGI+++++  K+L G G                   G SV                 +D++ LP   LR+ PKGGHG HNG  + +              GIG PPG MD   ++L  FS  ER ++D     GVEAVR L+L GF++S +  N  +  + H
Sbjct:  112 PWLLVGLGNPGKKYNGTRHNVGFEMVDAIAEAEGISISSVSFKSLFGKGFIGNVPVMLAKPQTFMNVSGESVGAIVSYYKIPLKQVLVIFDDLDLPFSKLRLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDTANFVLSPFSKREREELDFTFQNGVEAVRILLLEGFNKSASFVNTAKSLEQH 305

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: CRS2B_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic OS=Arabidopsis thaliana GN=CRS2B PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.882e-56
Identity = 116/201 (57.71%), Postives = 134/201 (66.67%), Query Frame = 1

Query:  139 KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID +A+ EG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNGVLR+QPKGG GYHNG  + +              GIG PPG MDMKA+LLQ+FS +E+ QI+ AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+HKV
Sbjct:   40 KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: CRS2_ORYSJ (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0132800 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.993e-52
Identity = 114/224 (50.89%), Postives = 134/224 (59.82%), Query Frame = 1

Query:   70 LRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIGGSS------------------------------------VYDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            LR+  +     V A +PD       EYTPWLI GLGNPG+KYHGTRHN+GFEM+D IA+ EGI MNTIQSK+L+GIG                                       +YDEMSLPNGVLR+Q KGGHG HNG  N +              GIG+PPG MD +A+LLQ+FS+ ER QID AL+QGV+AVRTLVL GF  SI  FNL QKYK+H V
Sbjct:   37 LRRTRLRRRIAVVASVPDPA-ARPAEYTPWLIAGLGNPGSKYHGTRHNVGFEMVDRIARDEGITMNTIQSKSLLGIGSIGEVPVLLVKPQSYINYSGEAIGPLAAYYQVPLRHILVMYDEMSLPNGVLRLQRKGGHGRHNGLQNVMECLDSSRELPRLSIGIGSPPGKMDTRAFLLQKFSSEERLQIDTALEQGVDAVRTLVLKGFSGSIERFNLVQKYKFHSV 259

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: CRS2A_ARATH (Chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic OS=Arabidopsis thaliana GN=CRS2A PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.441e-52
Identity = 123/248 (49.60%), Postives = 144/248 (58.06%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGA-KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M+ A S+P     YP+      S  K +      ++A LP + N   K EYTPWLIVGLGNPG KY+GTRHNIGFEMID IA+A  I+MNTIQSKAL+GIG                   G SV                 YD+M L NGVLR+QPKGGH  HNG  N                GIGNPPG MDMKA+LLQ+FS +ER Q+D  L+QGVE V+TLV  GF  SI+ FNL QKYK+HKV
Sbjct:    1 MFCASSSPITSPLYPK--AYKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: CRS2_MAIZE (Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic OS=Zea mays GN=CRS2 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 9.894e-52
Identity = 114/233 (48.93%), Postives = 137/233 (58.80%), Query Frame = 1

Query:   43 PRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIGGSS------------------------------------VYDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            PR+  + P L +        V + +PD   G  VEYTPWLI GLGNPGNKY+GTRHN+GFEM+D IA  EGI MNTIQSK+L+GIG                                       +YD+ SLPNGVLR+Q KGGHG HNG  N +              GIG+PPG MD +A+LLQ+FS+ ER QID AL+QGV+AVRTLVL GF  S   FNL QKYK+H+V
Sbjct:   26 PRKSLTAP-LHRIRRPRPFTVVSSVPDPAAGP-VEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAAEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDTSLPNGVLRLQKKGGHGRHNGLQNVIEHLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDTALEQGVDAVRTLVLKGFSGSTERFNLVQKYKFHRV 256

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: PTHM_ARATH (Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidopsis thaliana GN=At5g19830 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.875e-34
Identity = 83/197 (42.13%), Postives = 110/197 (55.84%), Query Frame = 1

Query:  148 YTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSS-----------------VYDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHK 591
            + PWL +GLGNPG+KY GTRHNIGFEMID  A++ GI MN +  KA++G G                   G S                 V+D+M LP GVLR+Q KGGHG HNG  + ++             GIG PPG MD KA+LLQ+FS   R ++D AL +GV+A++ ++   F +S   FN+ QKYK+ K
Sbjct:   16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: PTHC_ARATH (Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana GN=At1g18440 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.197e-34
Identity = 83/218 (38.07%), Postives = 111/218 (50.92%), Query Frame = 1

Query:   67 SLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQ 573
            S   +S      +   LP +   +     PWLIVGLGNPG KY GTRHN+GFEM+D +A AEGI+MNT+  KAL G G                   G SV                 YD++ LP G LR+ PKGGHG HNG  + +              GIG PPG MD   ++L++F+  E+ ++D     G+EA+R L+L GF++S T  N R+
Sbjct:   65 SSNSFSSQPESELLQALPSSKPKSPPLQLPWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRK 282

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: PTHM_ORYSJ (Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sativa subsp. japonica GN=Os01g0693900 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 5.644e-31
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 1

Query:  154 PWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQ 573
            PWL VGLGNPG  Y GTRHN+GFEMID IA+AEGI+++++Q KA++G G                   G SV                 YD++ LP   LR+ PKGGHG HNG  + ++             GIG PPG MD   ++L+ F+  E+ ++D A  +G+EAVR + L GF++S T  N  Q
Sbjct:   55 PWLFVGLGNPGKVYQGTRHNVGFEMIDVIAEAEGISLSSMQFKAMVGKGRIGDAPIMLAKPQTFMNASGESVGQLVSYFKIPLNQVLVMYDDLDLPFAKLRLLPKGGHGGHNGVRSIINHLKQNRDFPRLRIGIGRPPGKMDPANFVLRPFNRKEQEELDFAFHRGLEAVRIMALEGFNKSATYVNTAQ 243

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: PTH_PELCD (Peptidyl-tRNA hydrolase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=pth PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.795e-19
Identity = 56/185 (30.27%), Postives = 87/185 (47.03%), Query Frame = 1

Query:  160 LIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIGGSS------------------------------------VYDEMSLPNGVLRIQPKGGHGYHNGSMNYVS------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLR 570
            L+VGLGNPG +Y  TRHNIGF +    A+  G+++     + ++G G +                                     ++DE+ LP G +RI+  GGHG HNG  + V             G+G P G +D+  Y+L +FS+ E+ Q+D  L+  V+A+  L+  G  Q++  FN R
Sbjct:    3 LVVGLGNPGPEYAATRHNIGFLVAQKFAQQMGVSLKRQAYQGIVGTGRADGQETMVLLPQTYMNRSGVSVVSACKSKGIAVEDVVVIHDEIDLPFGSIRIKVGGGHGGHNGLRSIVDLLGCRDFLRVRMGVGRPQGQVDVAKYVLGQFSSTEKSQLDNVLENSVKALEVLLQKGAQQAMNEFNNR 187

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: CRS2L_ORYSJ (CRS2-like protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0347800 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.453e-19
Identity = 57/148 (38.51%), Postives = 77/148 (52.03%), Query Frame = 1

Query:   64 PSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYV 399
            P + K   STS   +  L  +++   V   PWL VGLGNPG KY  TRHN+GF+MID  A+++GI++     KAL G G                   G SV                 +D+M LP GVLR+QPKGG+G HNGS++++
Sbjct:   34 PFISKRHASTS---QTSLSSSSSSCSV-INPWLFVGLGNPGEKYQCTRHNVGFDMIDMFAQSQGISLTRHPFKALFGEGMVEGVPVLLAKPQTYMNLSGESVGPLAAYYKLPLNRVLVAFDDMDLPCGVLRLQPKGGYGRHNGSVDFI 177

[Close]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Match: PTH_THEFY (Peptidyl-tRNA hydrolase OS=Thermobifida fusca (strain YX) GN=pth PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.212e-18
Identity = 59/188 (31.38%), Postives = 89/188 (47.34%), Query Frame = 1

Query:  130 NGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALI-------------------GIGGSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNG---------SMNYVS---GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQS 549
            +GA V    WL+VGLGNPG KY G RHN+GF ++D +A   G      ++ A +                    + G  V                 +DE+ +P   L+++  GG   HNG         S +YV    GIG PPG MD  +++LQ FST ER ++D  + +  +AV T+V +G +++
Sbjct:   26 SGAVVSGERWLVVGLGNPGPKYAGNRHNVGFMVVDELAAQRGERWRLHKAHAQVVETRVGDAPVVLAKPASYMNLSGGPVAKLSAFYKVPVDRIIVVHDELDIPFARLKLKRGGGSAGHNGLRSITASLGSPDYVRVRVGIGRPPGRMDAASFVLQDFSTAERKELDVHVARAADAVETVVTSGLEKA 213

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: B9H311_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_648034 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 1.002e-67
Identity = 143/247 (57.89%), Postives = 160/247 (64.78%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M YAVS P  CIS PR   S    R+  VS    V+A LPDN NG KVEYTPWLIVGLGNPG KYHGTRHN+GFEMID IA+AEG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNG+LR+QPKGGHG+HNG  + +              GIGNPPGTMDMKA+LLQ+FS  ER QIDA+L+QGVEA+RTL+L GF   IT FNL QKYKYHKV
Sbjct:    1 MLYAVSTPRTCISCPR---SSRFHRRNLVSVRLCVRASLPDNANGVKVEYTPWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: B9RSL9_RICCO (Peptidyl-tRNA hydrolase, putative OS=Ricinus communis GN=RCOM_1726890 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.108e-66
Identity = 144/256 (56.25%), Postives = 166/256 (64.84%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNG-AKVEYTPWLIVGLGNPGNKYHGTRHNI--------GFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M YAVS PN CIS PR     P   ++  ST   ++  LP+N NG AK+EYTPWLIVGLGNPGNKYHGTRHN+        GFEMID IAKAE +AMNTIQSKALIGIG                   G SV                 YDEMSLPNGV+R+QPKGGHG+HNG  + +              GIGNPPGTMDM+A+LLQ+FS+ ER QIDAAL QG++AVRTLVL+GF+Q+IT FNL QKYKYHKV
Sbjct:    1 MLYAVSTPNTCISCPRNSFFRP---RHLASTRLSIRVSLPENGNGVAKIEYTPWLIVGLGNPGNKYHGTRHNVTNASLDLVGFEMIDKIAKAEAVAMNTIQSKALIGIGCIKEVPILLVKPQAYMNFSGESVGPLAAHYQVPLRHILLIYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTEREQIDAALGQGIDAVRTLVLSGFNQNITRFNLGQKYKYHKV 253

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: C6TK07_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.600e-65
Identity = 136/247 (55.06%), Postives = 160/247 (64.78%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M +AVSAP++C+SYP     PPS  +    T   V+  +    NGAKVEYTPWLI+GLGNPGNKYHGTRHN+GFE+ID +++AEGI MNTIQSKALIGIG                   G SV                 +DE SLPNGVLR+QPKGGHG+HNG  N +              GIGNPPGTMD++AYLLQ+FS  ER QIDA+L+Q V AVRT+VLNGFDQ +  FNL QKYKYHKV
Sbjct:    1 MLHAVSAPSFCLSYPGNLHYPPSSVQ---KTCFSVRCSVSQTKNGAKVEYTPWLIIGLGNPGNKYHGTRHNVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKPQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQHVNRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: I1N5A9_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.15701 PE=4 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 7.940e-65
Identity = 135/247 (54.66%), Postives = 159/247 (64.37%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M +AVSAP++C+SYP     PPS  +    T   V+  +    NGAKVEYTPWLI+GLGNPGNKYHGTRH +GFE+ID +++AEGI MNTIQSKALIGIG                   G SV                 +DE SLPNGVLR+QPKGGHG+HNG  N +              GIGNPPGTMD++AYLLQ+FS  ER QIDA+L+Q V AVRT+VLNGFDQ +  FNL QKYKYHKV
Sbjct:    1 MLHAVSAPSFCLSYPGNLHYPPSSVQ---KTCFSVRCSVSQTKNGAKVEYTPWLIIGLGNPGNKYHGTRHKVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAKPQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGHLDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQHVNRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: D7TT16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g02750 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.391e-61
Identity = 138/247 (55.87%), Postives = 152/247 (61.54%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M YAVS P+  IS  R        R+        V A LPD  NG KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID I++ EGI +NTIQSKALIGIG                   G SV                 YDEM+LPNGVLR+ P+GGHGYHNG  N +              GIGNPPGTMDMKAYLLQ+FS  ER QIDAA +QG+ AVR LVLNGF+ S T FNL QKYKYHKV
Sbjct:    1 MLYAVSGPSTSISCRRSLDYHGFRRRRLAPARLCVSASLPD-ANGIKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDRISQEEGILLNTIQSKALIGIGSIGEVPILLAKPQAYMNFSGESVGPLAAYYQVPLRHILVVYDEMNLPNGVLRLAPRGGHGYHNGLKNVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQKFSFEERKQIDAAQEQGIGAVRNLVLNGFNHSTTRFNLGQKYKYHKV 246

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: G7KUB5_MEDTR (Chloroplastic group IIB intron splicing facilitator CRS2-B OS=Medicago truncatula GN=MTR_7g082240 PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 5.511e-58
Identity = 126/251 (50.20%), Postives = 160/251 (63.75%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLR-KYSVSTSX-RVKAXLPD-NTNGA-KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M +  S+P   ++YP +         K++V TS   V+  +P  N NG  K+EYTPWL+VGLGNPGNKYHGTRHN+GFE+ID ++++EGI MNTIQSKALIGIG                   G SV                 YDE SLPNGVL++QPKGGHG+HNG  N +              GIGNPPGTMD++A+LLQ+FS+VER Q+D +L+QGV+AV+TLVLNGF+  +  FNL QKYKY+KV
Sbjct:    1 MLHLASSPTLSLTYPNKNLQHIRYTTKFAVKTSSFSVRCSVPQANNNGDNKMEYTPWLVVGLGNPGNKYHGTRHNVGFEIIDSLSQSEGILMNTIQSKALIGIGSIGEVPVLLAKPQTYMNFSGESVGPLAAYYRVPLRHILVVYDETSLPNGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVKTLVLNGFNHHVNRFNLGQKYKYNKV 251

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: G7LGI3_MEDTR (Chloroplastic group IIB intron splicing facilitator CRS2-B OS=Medicago truncatula GN=MTR_8g095500 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.501e-55
Identity = 115/218 (52.75%), Postives = 144/218 (66.06%), Query Frame = 1

Query:   88 STSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            ST   V+  LP+  N  K+EYTPWL+VGLGNPGNKYH TRHN+GFE+ID +++++GI MNTIQSKALIGIG                   G SV                 YDE SLP+GVL++QPKGGHG+HNG  N +              GIGNPPGTMD++A+LLQ+FS+VER Q+D +L+QGV+AVRTLVLNGF+  +  FNL QKYKY++V
Sbjct:   28 STKFSVRCSLPNGDN--KLEYTPWLVVGLGNPGNKYHATRHNVGFEIIDSLSQSQGILMNTIQSKALIGIGSIGEVPVLLAKPQTYMNFSGESVGPLAAYYRVPLRHILVVYDETSLPSGVLKLQPKGGHGHHNGLKNVIGHLDGSRDFPRLAIGIGNPPGTMDLRAFLLQKFSSVERKQVDESLEQGVQAVRTLVLNGFNHHVNRFNLGQKYKYNRV 243

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: D7M817_ARALL (Peptidyl-tRNA hydrolase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488464 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 4.367e-55
Identity = 117/201 (58.21%), Postives = 133/201 (66.17%), Query Frame = 1

Query:  139 KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID +A+ EG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNGVLR+QPKGG GYHNG  + +              GIG PPG MDMKA+LLQ+FS +ER QID AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+H V
Sbjct:   39 KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLVKPQTYMNFSGESVGSLASHYRVPLRHILMLYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLERKQIDEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHNV 239

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: D7MK16_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_659872 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 5.703e-55
Identity = 127/247 (51.42%), Postives = 147/247 (59.51%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M+ + S P   + YP+    P S R  S+      +A LP + N  KVEYTPWLIVGLGNPG KY+GTRHNIGFEMID IA+A  I+MNTIQSKAL+GIG                   G SV                 YD+M LPNGVLR+QPKGGH  HNG  N                GIGNPPG MDMKA+LLQ+FS +ER QIDA L+QGVE V+TLV  GF  SI+ FNL QKYK+H V
Sbjct:    1 MFCSSSPPITSLLYPKAQKKPNSKRFSSL------RASLPVSDNKLKVEYTPWLIVGLGNPGFKYYGTRHNIGFEMIDHIARATEISMNTIQSKALVGIGSVGEVPILLVKPQAYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLPNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQIDAGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHTV 241

[Close]

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Match: C5XQU4_SORBI (Putative uncharacterized protein Sb03g007130 OS=Sorghum bicolor GN=Sb03g007130 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.519e-52
Identity = 119/233 (51.07%), Postives = 140/233 (60.09%), Query Frame = 1

Query:   43 PRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIGGSS------------------------------------VYDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            PRR  + P L +   S    V A +PD   G  VEYTPWLI GLGNPGNKY+GTRHN+GFEM+D IA  EGI MNTIQSK+L+GIG                                       +YD+MSLPNGVLR+Q KGGHG HNG  N +              GIG+PPG MD +A+LLQ+FS+ ER QIDA+L+QGV+AVRTLVL GF  S   FNL QKYK+HKV
Sbjct:   26 PRRNLTAP-LHRIRRSRLLTVVASVPDPAAGP-VEYTPWLIAGLGNPGNKYYGTRHNVGFEMVDRIAGEEGITMNTIQSKSLLGIGSIGEVPVLVVKPQSYMNYSGEAIGPLAAYYQVPLRHILLIYDDMSLPNGVLRLQKKGGHGRHNGLQNVIENLDGRREFPRLSIGIGSPPGKMDPRAFLLQKFSSEERVQIDASLEQGVDAVRTLVLKGFCGSTERFNLVQKYKFHKV 256

[Close]

BLAST of MDP0000435964 vs. TAIR10
Match: AT5G16140.2 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:5270308-5271517 REVERSE LENGTH=240)

HSP 1 Score: 217.624 bits (553), Expect = 3.960e-57
Identity = 116/201 (57.71%), Postives = 134/201 (66.67%), Query Frame = 1

Query:  139 KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID +A+ EG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNGVLR+QPKGG GYHNG  + +              GIG PPG MDMKA+LLQ+FS +E+ QI+ AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+HKV
Sbjct:   40 KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of MDP0000435964 vs. TAIR10
Match: AT5G16140.1 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:5270308-5271517 REVERSE LENGTH=240)

HSP 1 Score: 217.624 bits (553), Expect = 3.960e-57
Identity = 116/201 (57.71%), Postives = 134/201 (66.67%), Query Frame = 1

Query:  139 KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            KVEYTPWLIVGLGNPGNKYHGTRHN+GFEMID +A+ EG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNGVLR+QPKGG GYHNG  + +              GIG PPG MDMKA+LLQ+FS +E+ QI+ AL+QG EAV+TLVLNGF+Q I+ FNL QKYK+HKV
Sbjct:   40 KVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDVLARKEGVLMNTIQSKALIGIGAIEDVPILLAKPQTYMNFSGESVGSLASHYRVPLRHILMIYDEMALPNGVLRLQPKGGQGYHNGVKSVMGHLDGRRNFPRLSIGIGKPPGNMDMKAFLLQKFSPLEQKQIEEALEQGSEAVKTLVLNGFNQGISRFNLVQKYKFHKV 240

[Close]

BLAST of MDP0000435964 vs. TAIR10
Match: AT5G38290.1 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:15303603-15305381 FORWARD LENGTH=246)

HSP 1 Score: 204.142 bits (518), Expect = 4.531e-53
Identity = 123/248 (49.60%), Postives = 144/248 (58.06%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGA-KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M+ A S+P     YP+      S  K +      ++A LP + N   K EYTPWLIVGLGNPG KY+GTRHNIGFEMID IA+A  I+MNTIQSKAL+GIG                   G SV                 YD+M L NGVLR+QPKGGH  HNG  N                GIGNPPG MDMKA+LLQ+FS +ER Q+D  L+QGVE V+TLV  GF  SI+ FNL QKYK+HKV
Sbjct:    1 MFCASSSPITSPLYPK--AYKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 246

[Close]

BLAST of MDP0000435964 vs. TAIR10
Match: AT5G38290.2 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:15303491-15305381 FORWARD LENGTH=250)

HSP 1 Score: 204.142 bits (518), Expect = 4.531e-53
Identity = 123/248 (49.60%), Postives = 144/248 (58.06%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGA-KVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M+ A S+P     YP+      S  K +      ++A LP + N   K EYTPWLIVGLGNPG KY+GTRHNIGFEMID IA+A  I+MNTIQSKAL+GIG                   G SV                 YD+M L NGVLR+QPKGGH  HNG  N                GIGNPPG MDMKA+LLQ+FS +ER Q+D  L+QGVE V+TLV  GF  SI+ FNL QKYK+HKV
Sbjct:    5 MFCASSSPITSPLYPK--AYKFSQTKSNSKRFSSLRASLPVSDNKLLKFEYTPWLIVGLGNPGLKYYGTRHNIGFEMIDHIARATDISMNTIQSKALVGIGSVGEVPILLVKPQGYMNFSGESVGPLAAYYQIPLRHILMIYDDMGLSNGVLRLQPKGGHSQHNGLKNVTEHLNGCRGYPRLSIGIGNPPGNMDMKAFLLQKFSPLERKQMDEGLEQGVEGVKTLVEEGFSDSISRFNLGQKYKFHKV 250

[Close]

BLAST of MDP0000435964 vs. TAIR10
Match: AT5G19830.1 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr5:6703383-6705125 FORWARD LENGTH=219)

HSP 1 Score: 145.591 bits (366), Expect = 1.913e-35
Identity = 83/197 (42.13%), Postives = 110/197 (55.84%), Query Frame = 1

Query:  148 YTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSS-----------------VYDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHK 591
            + PWL +GLGNPG+KY GTRHNIGFEMID  A++ GI MN +  KA++G G                   G S                 V+D+M LP GVLR+Q KGGHG HNG  + ++             GIG PPG MD KA+LLQ+FS   R ++D AL +GV+A++ ++   F +S   FN+ QKYK+ K
Sbjct:   16 HRPWLFLGLGNPGDKYKGTRHNIGFEMIDVFAESVGIQMNLVNFKAIMGQGFVADLPVILAKPQTYMNLSGESSGPLAAYYKLPLNRVLVVHDDMQLPCGVLRLQEKGGHGCHNGLKSVMNHFRGNREFARLRIGIGKPPGQMDPKAFLLQKFSMPARERMDKALAEGVDALKLVLAKDFGESWRLFNVEQKYKHLK 212

[Close]

BLAST of MDP0000435964 vs. TAIR10
Match: AT1G18440.1 (| Symbols: | Peptidyl-tRNA hydrolase family protein | chr1:6345994-6347686 FORWARD LENGTH=288)

HSP 1 Score: 144.821 bits (364), Expect = 3.262e-35
Identity = 83/218 (38.07%), Postives = 111/218 (50.92%), Query Frame = 1

Query:   67 SLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQ 573
            S   +S      +   LP +   +     PWLIVGLGNPG KY GTRHN+GFEM+D +A AEGI+MNT+  KAL G G                   G SV                 YD++ LP G LR+ PKGGHG HNG  + +              GIG PPG MD   ++L++F+  E+ ++D     G+EA+R L+L GF++S T  N R+
Sbjct:   65 SSNSFSSQPESELLQALPSSKPKSPPLQLPWLIVGLGNPGKKYQGTRHNVGFEMVDALADAEGISMNTVNFKALFGKGVIGNIPIMLAKPQTFMNLSGESVGQIVSFYKIPLKQVLVVYDDLDLPFGKLRLLPKGGHGGHNGMRSIIDRLKGSRDFPRLRIGIGRPPGKMDTANFVLRQFNRQEQEELDHTFQTGLEAIRILLLEGFNKSATFVNTRK 282

[Close]

BLAST of MDP0000435964 vs. Populus trichicarpa v2.0
Match: POPTR_0004s09730.1 ()

HSP 1 Score: 260.766 bits (665), Expect = 4.630e-70
Identity = 143/247 (57.89%), Postives = 160/247 (64.78%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            M YAVS P  CIS PR   S    R+  VS    V+A LPDN NG KVEYTPWLIVGLGNPG KYHGTRHN+GFEMID IA+AEG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNG+LR+QPKGGHG+HNG  + +              GIGNPPGTMDMKA+LLQ+FS  ER QIDA+L+QGVEA+RTL+L GF   IT FNL QKYKYHKV
Sbjct:    1 MLYAVSTPRTCISCPR---SSRFHRRNLVSVRLCVRASLPDNANGVKVEYTPWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNGVKSVMDHLDGCREFPRLCIGIGNPPGTMDMKAFLLQKFSPTEREQIDASLEQGVEAMRTLILGGFTNKITRFNLGQKYKYHKV 244

[Close]

BLAST of MDP0000435964 vs. Populus trichicarpa v2.0
Match: POPTR_1290s00200.1 ()

HSP 1 Score: 170.629 bits (431), Expect = 6.301e-43
Identity = 94/164 (57.32%), Postives = 103/164 (62.80%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNG 384
            M YAVS P  CIS PR   S    R+  VS    V+A LPDN NG KVEYTPWLIVGLGNPG KYHGTRHN+GFEMID IA+AEG+ MNTIQSKALIGIG                   G SV                 YDEM+LPNG+LR+QPKGGHG+HNG
Sbjct:    1 MLYAVSTPRTCISCPR---SSRFHRRNLVSVRLCVRASLPDNANGVKVEYTPWLIVGLGNPGTKYHGTRHNVGFEMIDRIAQAEGVLMNTIQSKALIGIGCIGEVPILLAKPQAYMNFSGESVGPLAAHYKIPLRHILLIYDEMNLPNGILRVQPKGGHGHHNG 161

[Close]

BLAST of MDP0000435964 vs. Populus trichicarpa v2.0
Match: POPTR_0001s04230.1 ()

HSP 1 Score: 142.51 bits (358), Expect = 1.838e-34
Identity = 82/194 (42.27%), Postives = 103/194 (53.09%), Query Frame = 1

Query:  151 TPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKY 585
            +PWL VGLGNPG K+ GTRHN+GFEMID  A + GI+MN    KAL G G                   G S                  +D+M LP GVLR+Q KGGHG H G  + ++             GIG PPG MD KA+LLQ+F+   R +IDAAL +GV A+R ++  G  ++   FN  QKYKY
Sbjct:   21 SPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAGSLGISMNIPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDAALPEGVVALRCILFEGLTRTARWFNQEQKYKY 214

[Close]

BLAST of MDP0000435964 vs. Populus trichicarpa v2.0
Match: POPTR_0012s05820.1 ()

HSP 1 Score: 133.265 bits (334), Expect = 1.115e-31
Identity = 78/214 (36.45%), Postives = 108/214 (50.47%), Query Frame = 1

Query:   82 SVSTSXRVKAXLPDNTNGAKV----EYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFN 564
            S S+S  +     D+++        +  PWLIVGLGNPG KYH TRHN+GF+M+D +A AEGI+++ +  KAL G G                   G SV                 YD++ LP   LR+ PKGGHG HNG  + ++             GIG PPG MD   ++L+ F+  E  ++D    QG+EAVR L+L G ++S T  N
Sbjct:   49 SSSSSASISTTTEDSSDAVAAAKPKQQHPWLIVGLGNPGKKYHSTRHNVGFQMVDALADAEGISISGVSFKALFGKGFIGNVPVMFAKPQTFMNASGESVGAIVSYYKIPLKQVLLIYDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNRDFPRLRIGIGRPPGKMDTANFVLRPFTKQEHEELDFMFQQGIEAVRILLLEGLNKSATFVN 262

[Close]

BLAST of MDP0000435964 vs. Populus trichicarpa v2.0
Match: POPTR_0001s04230.2 ()

HSP 1 Score: 121.324 bits (303), Expect = 4.384e-28
Identity = 71/182 (39.01%), Postives = 95/182 (52.20%), Query Frame = 1

Query:  151 TPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKA---EGIAMNT----IQSKALIGIGGSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKY 585
            +PWL VGLGNPG K+ GTRHN    M   + KA   EG   +      + +  + + G S                  +D+M LP GVLR+Q KGGHG H G  + ++             GIG PPG MD KA+LLQ+F+   R +IDAAL +GV A+R ++  G  ++   FN  QKYKY
Sbjct:   21 SPWLFVGLGNPGEKFKGTRHNAWISMNIPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARERIDAALPEGVVALRCILFEGLTRTARWFNQEQKYKY 202

[Close]

BLAST of MDP0000435964 vs. Populus trichicarpa v2.0
Match: POPTR_0001s04230.3 ()

HSP 1 Score: 110.153 bits (274), Expect = 1.011e-24
Identity = 65/159 (40.88%), Postives = 80/159 (50.31%), Query Frame = 1

Query:  151 TPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQ 480
            +PWL VGLGNPG K+ GTRHN+GFEMID  A + GI+MN    KAL G G                   G S                  +D+M LP GVLR+Q KGGHG H G  + ++             GIG PPG MD KA+LLQ+F+   R +
Sbjct:   21 SPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAGSLGISMNIPLCKALFGEGFVGDAPVLLAKPQTYMNLSGESAGPLAAYYKLPLNRVIVFHDDMELPCGVLRLQEKGGHGCHRGLKSVINHFRGNREFARLRIGIGRPPGQMDPKAFLLQKFNATARER 179

[Close]

BLAST of MDP0000435964 vs. GDR
Match: ppa010513m ()

HSP 1 Score: 328.561 bits (841), Expect = 1.281e-90
Identity = 173/247 (70.04%), Postives = 181/247 (73.28%), Query Frame = 1

Query:    1 MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            MWYAVSAP+ CISYPRRPCSP  LRK SV TS  V+A LP+N NGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMID IAK +G+ MNTIQSKAL+GIG                   G SV                 YDEMSLPNGVLRIQPKGGHGYHNG  + +              GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV
Sbjct:    1 MWYAVSAPHCCISYPRRPCSPRFLRKCSVPTSFCVQASLPENNNGAKVEYTPWLIVGLGNPGNKYHGTRHNIGFEMIDSIAKTQGVVMNTIQSKALVGIGSIGEVPILLAKPQAYMNYSGESVGPLAAYYQVPLRHILLVYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 247

[Close]

BLAST of MDP0000435964 vs. GDR
Match: ppa011211m ()

HSP 1 Score: 142.124 bits (357), Expect = 1.700e-34
Identity = 81/197 (41.12%), Postives = 107/197 (54.31%), Query Frame = 1

Query:  154 PWLIVGLGNPGNKYHGTRHN-IGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 594
            PWL VGLGNPGNKY GTRHN +GFEMID  A ++GI M+T+  KA+ G G                   G S                  +D+M+LP GVLR+ P GGHG HNG  + +              GIG PPG MD KA+LLQ+F+   + +IDAAL +GV+ ++ L+  G  +S   FN  QKYK+ ++
Sbjct:   17 PWLFVGLGNPGNKYKGTRHNQVGFEMIDVFANSQGIEMSTVHCKAIFGQGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYKLPLNRVLVFHDDMNLPCGVLRLHPNGGHGCHNGVKSVMYHFRGNREFPRLRIGIGRPPGQMDPKAFLLQKFNATAQGRIDAALQEGVDILKVLLSEGLAESARRFNSEQKYKHMRL 213

[Close]

BLAST of MDP0000435964 vs. GDR
Match: ppa010131m ()

HSP 1 Score: 136.732 bits (343), Expect = 7.144e-33
Identity = 82/213 (38.50%), Postives = 111/213 (52.11%), Query Frame = 1

Query:   88 STSXRVKAXLPDNTNGAKVEYT-----PWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG-------------------GSSV-----------------YDEMSLPNGVLRIQPKGGHGYHNGSMNYVS-------------GIGNPPGTMDMKAYLLQRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFN 564
            S+S    +  P ++N A VE       PWLIVGLGNPG KYH TRHN+GFEM+D IA+AEGI+++++  KAL+G G                   G SV                 +D++ LP   LR+ PKGGHG HNG  + +              GIG PPG MD   ++L+ F+  E  +++     GVEAVR L+L GF++S T  N
Sbjct:   41 SSSPSASSAPPMSSNTAAVESKKPPKQPWLIVGLGNPGKKYHSTRHNVGFEMVDAIAEAEGISLSSVSFKALVGKGLIGDVPVIFAKPQTFMNKSGESVGSIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMRSVIDHFKGSRDFPRLRIGIGRPPGKMDPVNFVLRPFTKQELEELNFTFQDGVEAVRILLLEGFNKSATFVN 253

The following BLAST results are available for this feature:

BLAST of MDP0000435964 vs. NCBI nr
BLAST of MDP0000435964 vs. Vitis vinifera
BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
BLAST of MDP0000435964 vs. ExPASy TrEMBL
BLAST of MDP0000435964 vs. TAIR10
BLAST of MDP0000435964 vs. Populus trichicarpa v2.0
BLAST of MDP0000435964 vs. GDR

BLAST of MDP0000435964 vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs NCBI nr)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|224079329\|ref\|XP_002305823.1\|	9.091e-68	57.89	predicted protein [Populus trichocarpa] >gi\|222848...	[more]
gi\|388501072\|gb\|AFK38602.1\|	5.892e-67	53.04	unknown [Lotus japonicus]	[more]
gi\|255551384\|ref\|XP_002516738.1\|	1.005e-66	56.25	peptidyl-tRNA hydrolase, putative [Ricinus communi...	[more]
gi\|358248120\|ref\|NP_001239818.1\|	1.451e-65	55.06	uncharacterized protein LOC100804132 [Glycine max]...	[more]
gi\|225452074\|ref\|XP_002284030.1\|	2.169e-61	55.87	PREDICTED: chloroplastic group IIB intron splicing...	[more]
gi\|357508117\|ref\|XP_003624347.1\|	5.000e-58	50.20	Chloroplastic group IIB intron splicing facilitato...	[more]
gi\|357520293\|ref\|XP_003630435.1\|	1.362e-55	52.75	Chloroplastic group IIB intron splicing facilitato...	[more]
gi\|297811751\|ref\|XP_002873759.1\|	3.962e-55	58.21	peptidyl-tRNA hydrolase family protein [Arabidopsi...	[more]
gi\|297805938\|ref\|XP_002870853.1\|	5.174e-55	51.42	predicted protein [Arabidopsis lyrata subsp. lyrat...	[more]
gi\|15237280\|ref\|NP_197118.1\|	8.825e-55	57.71	chloroplastic group IIB intron splicing facilitato...	[more]

Pages

BLAST of MDP0000435964 vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Vitis vinifera)
Total hits: 3


Match Name	E-value	Identity	Description
GSVIVT01031009001	6.698e-64	55.87	assembled CDS	[more]
GSVIVT01025453001	4.524e-36	42.35	assembled CDS	[more]
GSVIVT01008257001	6.114e-33	39.18	assembled CDS	[more]

BLAST of MDP0000435964 vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt Swiss-Prot)
Total hits: 25


Match Name	E-value	Identity	Description
CRS2B_ARATH	3.882e-56	57.71	Chloroplastic group IIB intron splicing facilitato...	[more]
CRS2_ORYSJ	1.993e-52	50.89	Chloroplastic group IIB intron splicing facilitato...	[more]
CRS2A_ARATH	4.441e-52	49.60	Chloroplastic group IIB intron splicing facilitato...	[more]
CRS2_MAIZE	9.894e-52	48.93	Chloroplastic group IIB intron splicing facilitato...	[more]
PTHM_ARATH	1.875e-34	42.13	Peptidyl-tRNA hydrolase, mitochondrial OS=Arabidop...	[more]
PTHC_ARATH	3.197e-34	38.07	Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidop...	[more]
PTHM_ORYSJ	5.644e-31	40.21	Peptidyl-tRNA hydrolase, mitochondrial OS=Oryza sa...	[more]
PTH_PELCD	3.795e-19	30.27	Peptidyl-tRNA hydrolase OS=Pelobacter carbinolicus...	[more]
CRS2L_ORYSJ	8.453e-19	38.51	CRS2-like protein, chloroplastic OS=Oryza sativa s...	[more]
PTH_THEFY	3.212e-18	31.38	Peptidyl-tRNA hydrolase OS=Thermobifida fusca (str...	[more]

Pages

BLAST of MDP0000435964 vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
B9H311_POPTR	1.002e-67	57.89	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9RSL9_RICCO	1.108e-66	56.25	Peptidyl-tRNA hydrolase, putative OS=Ricinus commu...	[more]
C6TK07_SOYBN	1.600e-65	55.06	Putative uncharacterized protein OS=Glycine max PE...	[more]
I1N5A9_SOYBN	7.940e-65	54.66	Uncharacterized protein OS=Glycine max GN=Gma.1570...	[more]
D7TT16_VITVI	2.391e-61	55.87	Putative uncharacterized protein OS=Vitis vinifera...	[more]
G7KUB5_MEDTR	5.511e-58	50.20	Chloroplastic group IIB intron splicing facilitato...	[more]
G7LGI3_MEDTR	1.501e-55	52.75	Chloroplastic group IIB intron splicing facilitato...	[more]
D7M817_ARALL	4.367e-55	58.21	Peptidyl-tRNA hydrolase family protein OS=Arabidop...	[more]
D7MK16_ARALL	5.703e-55	51.42	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
C5XQU4_SORBI	4.519e-52	51.07	Putative uncharacterized protein Sb03g007130 OS=So...	[more]

Pages

BLAST of MDP0000435964 vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs TAIR 10)
Total hits: 6


Match Name	E-value	Identity	Description
AT5G16140.2	3.960e-57	57.71	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT5G16140.1	3.960e-57	57.71	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT5G38290.1	4.531e-53	49.60	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT5G38290.2	4.531e-53	49.60	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT5G19830.1	1.913e-35	42.13	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]
AT1G18440.1	3.262e-35	38.07	\| Symbols: \| Peptidyl-tRNA hydrolase family prote...	[more]

BLAST of MDP0000435964 vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Populus trichocarpa v2.0)
Total hits: 6


Match Name	E-value	Identity
POPTR_0004s09730.1	4.630e-70	57.89	[more]
POPTR_1290s00200.1	6.301e-43	57.32	[more]
POPTR_0001s04230.1	1.838e-34	42.27	[more]
POPTR_0012s05820.1	1.115e-31	36.45	[more]
POPTR_0001s04230.2	4.384e-28	39.01	[more]
POPTR_0001s04230.3	1.011e-24	40.88	[more]

BLAST of MDP0000435964 vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Prunus persica v1.0)
Total hits: 3


Match Name	E-value	Identity
ppa010513m	1.281e-90	70.04	[more]
ppa011211m	1.700e-34	41.12	[more]
ppa010131m	7.144e-33	38.50	[more]

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001328	Peptidyl-tRNA hydrolase	GENE3D	3.40.50.1470	no description	coord: 47..98 score: 2.6e-15coord: 104..193 score: 5
IPR001328	Peptidyl-tRNA hydrolase	PANTHER	PTHR17224	FAMILY NOT NAMED	coord: 49..195 score: 7.7
IPR001328	Peptidyl-tRNA hydrolase	PFAM	PF01195	Pept_tRNA_hydro	coord: 54..92 score: 1.6e-11coord: 104..188 score: 8.5
IPR001328	Peptidyl-tRNA hydrolase	SUPERFAMILY	53178	Peptidyl-tRNA hydrolase-like	coord: 50..191 score: 2.1
IPR018171	Peptidyl-tRNA hydrolase, conserved site	PROSITE	PS01195	PEPT_TRNA_HYDROL_1	coord: 65..78 score
None	No IPR available	SEG	seg	seg	coord: 18..43 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:20206120..20209989-
mRNA from alignment at MDC016058.80:21764..25633-
coding sequence from alignment at MDC016058.80:21764..25633-

mRNA sequence

>MDP0000435964 ID=MDP0000435964; Name=MDP0000435964; organism=Malus x domestica; type=mRNA; length=3870bp
ATGTGGTATGCTGTCTCTGCCCCAAACTATTGCATATCATATCCGAGAAG
ACCTTGCAGCCCTCCTTCTCTRAGGAAGTATTCGGTTTCCACAAGTTTWC
GTGTGAARGCTTSCTTACCGGATAATACCAATGGYGCTAAAGTGGAGTAC
ACTCCTTGGCTGATTGTTGGATTGGGTAACCCTGGCAACAAGTACCATGG
GACTAGGCACAATGTAATATTCCACCTTTATAAACTAGTTTAAGTGTTTC
GGTTGAATTCTTTTTCATTACCCTTTGTTTCCTGTGGGTTTTGTACACCA
GATTGGTTTCGAGATGATTGATGGTATTGCTAAAGCAGAAGGCATTGCGA
TGAATACAATACAGTCGAAGGCCTTGATTGGAATAGGTGGGTCTTCAGTA
GTATTTTAAGTGTTTCAATTCTTGTTTTTCAATTCCACATTTTCATGTGT
TTTGGTGTTCATTTAGATTCTTYTCTGTGATCAGTACAGGCTCCATTGGA
GAAGTACCAATTTTGTTGGTGAAGCCTCAAGCCTACATGAATTATAGCGG
AGAATCGGTGTGTTCTCATCGTTTCTGTTTGCTYTTTTTGGTGTCAATTT
TGGCTCACATAACTGTTATACACTCCACTACCCMTAAGTGTTCTATGATA
ACTTTGTATTACTTATAACCTAAACTCTGTGAYGTCCCRACGAAAGTGAC
AGGATACTCTATACTGGACAGACCATTAGATTGAGAATCCATAATGTAAA
TTTCTGTTGCACCTAATGGAAGGGTTCAAGTAAACTTCAAAAGGAGCTTT
CRTTTAGTATAATTATTCGTATTTTCCTCAACGCTGCAATCAGTTTTTGA
TGGAAGAAGAGCTGTGTTTCATGAAATACCGTCTTCCAGGAATATGTAAA
AGTAATAATGATTAATTAGCTCCGGAGTGTGCTTTCTGCAATTGATTACA
ATCATTTACCATTCACTCACGTAGAGTTTAACCTGGCTGTGAACTAAGCA
ATGGTGATTTCTATATCATTACATGTTTGAAAATTTCAAACCATATCTTT
CATTGTGGTGTGTAATCAGATGATTGACATTTTCGAGCTCGTGAAAAATT
ATAAGACTGATCAATTTTGTTGGCAAAATGGAATAACGTGATGAAGCGAT
GTGCCATTTTCATAAATATTTTTCTTCATGTTCATGTTTATGGGTTTAGC
CGACCCCACTTAGTGGGAAAAGGCTTTGTTGTTGTTGTTGTTGTTGTTGT
TCATGTTTATGGGTGCACTTATGCCAAAATATCCATGAGCATCATAGTAT
GTATCTCCTTTTCTTTAGTTGAATGAGTAAATGCCAGTGTGATTAGAGCT
ACCTTACGATTGCATTTTTCCATCACTTATTCTCCTTTYRTTATTCTTAA
GGTTGGACCACTTGCGGCATATTATCAAGTACCCCTACGCCATATTTTAC
TGGTATGCATTTTTTGTATCTTAATGTCAGCTTTACAAGATTAATAAATT
CCTTTCTTTAATTTAGTTCATCAAGTTCAATGTCRCATTACATWAATGGG
AGCCATGGACTTGTAGGTTTAYGATGAGATGAGCTTACCAAATGGTGTTC
TGAGGATTCAGCCAAAAGGTGGWCATGGCTATCACAATGGGTATGTGTGA
ATATTAATTTTGAACAGAATTCATATGAAAATTTATCTATCACTTTCCTC
TGTTCTTGAATAAATATGTTTTCAAAATCAAGAAAAAGTAGTTTGATTCT
TTTATCTCTTAACGATGCATAATGTTAGTTTGTCCAACTAGTTTCTGACT
TAGAATTGAAGATTCTATAACTATAATTAACMTACTAAATGAGGTGGATT
CTATRGTAAATTATATTTTCYGTGKTATGTTCTRATTGATGTCTTTCACG
AGAGCTGCTAAATTAACYGTGTTGAMATTCCTAATGAACAAGTATTAARG
ACAKTTTCTCAATTTTTGCAWTCTGTAYMCTGTGAAGGTACGTTTGCAYR
GATGCTTTCTGTAGTCCATTGTTAGTAAGTTTTCATGTACCATTGTGAYT
AAGTTCCATGCTTATTAARAAGGATATGGAGCAGGAATCTTACTAGATTC
AATTAGAGRTGTATTAGTGGTGATGTCATAAGAAGAAGTWAAAGTAAGKG
GTTTKAGGTTCTTAGTGTTGGCTGAATAGCAAGTGGATGAAGAAACACCC
TGTTCGTGTCCTTTTATCTATAGATTCCGAACTAGAAATTAAATAAACAT
TATACTGATTCTAGAAAGGGATACTTCAGTCTCAWATTTTAGCTACCCAT
ACTTAATTTGACGGGTTTGACAGTTTGGCTACAGAAAACCGAKATTTTTY
CTGTAGATTGTTTAGTTGTTTACMTTTAAGCCTTTATTTCMTTGCAAAAT
CAAAGGGTAACYATGCATCACTTTGTTTTTTTTTGGTTACAACYATGCAT
CACTTTTCCTTGATATGCTTAGRAAAAAAGAAAAAGCCAATCTGGCTCRG
ATGATTTAGTWTAGAAGGAAGCAAAGACTATACATAGTCTTTCCGGGGTT
GTTTGTTTGAAATCYTCTCWAAACAAATCTTTCCCTTTTCCATACAGTTA
GAGCTTTAAAAGTCCAAATGAATTTMAATTGCTCTTCTCAGAATCTTGTA
GAAAAATGGTAGAGTCGGGGCACACTCAAAGTTGTTGATATGTGTGCTAC
TGGGTTTTATGTGAATTTGTGGTTAGGTGAAGTTATAGACTGGAGGTTGT
TTGATAATATTGGAAGTGGCAACAGTAACATTTTATCTGTCTCAGAAAAA
TTGTGCTTGGCGTGGATCATTTGAAAGTCAAACTCTTCTCTAGCTTGTTA
GGGTTGCATATTTTCCTGTCCTTATTAAACCACTACTTTTTTATCTGCCA
TTTATGTTCCCTGATTCTTGTTTACCCAATGCTTGGCCATGAAGAAAGGA
AAAGATTTAACCCAACTCGTACTGCCCCTAACCAAAATTACATTTTGTTC
TTATTAGCTTTCTATTGGTAAGCAAACGCAAAAAAAATTAAAACTTCTGT
TTCTTTTGTTTCTTCCTCTTTTTCTCTCTTATTTTCTCTTCTCTCTAGTT
GAAAGCATACGGAAGGCAGGAAGGAAAGAAWATAATTATGAACAGCTTGA
ACTTRATTGTCYTGTGACACATTCTTTYAGAAATGCTGATCCACGTAACT
CCRTATCAGGCAATACAAAACTGAKTAATAACGYGTCTGCTGAATCCCGC
TYCTCTCATGTTCCAAWCTTTTTATAATTGYTTTCTCCTTGTTGCAGTGT
AAAAAGTGTAATGGGCCATCTGGACGGTTGYCGTGAATTTCCTCGGCTGT
GTATAGGTTTGTTTCTTCAGTASTATTTTCAACYRWTRGTTARGTGTCTT
AGTCCAAAAGGGTCTATACTTGCCTTAATTGGAAACTAAAAGAGGAGTAT
GAATTATGTTTCAGGTATTGGAAATCCACCTGGAACTATGGACATGAAAG
CCTATCTTCTACAGAGATTCAGTACAGTCGAGAGACATCAGGTWTATCGT
YGTTTCTAAATAGTTCTGACTCATGGTATTAAGGAAATTCATTGATCACT
TAAATGGTCAGAAAATATTTGCTTGCCCACACGCTCGCCATGCACATTCA
AATGTTCACGCATCTGCAATTTACRTTGTCTGTTCACTTGAATTGGTGTG
AATTTCAACCTGTAATATCAAATTTGACCRATATCTGCTATATATGTGAA
CAGATTGATGCAGCACTGGATCAAGGGGTTGAAGCTGTAAGGACCCTGGT
GCTGAATGGATTTGACCAGAGCATCACTAGTTTTAATTTGAGGCAGAAAT
ACAAATATCACAAAGTGTAA

protein sequence of MDP0000435964

>MDP0000435964 ID=MDP0000435964; Name=MDP0000435964; organism=Malus x domestica; type=polypeptide; length=199bp
MWYAVSAPNYCISYPRRPCSPPSLRKYSVSTSXRVKAXLPDNTNGAKVEY
TPWLIVGLGNPGNKYHGTRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIG
GSSVYDEMSLPNGVLRIQPKGGHGYHNGSMNYVSGIGNPPGTMDMKAYLL
QRFSTVERHQIDAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV*

mRNA from alignment at chr17:20206120..20209989-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000435964 ID=MDP0000435964; Name=MDP0000435964; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr17:20206120..20209989- (Malus x domestica

mRNA from alignment at MDC016058.80:21764..25633-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000435964 ID=MDP0000435964; Name=MDP0000435964; organism=Malus x domestica; type=mRNA; length=3870bp; location=Sequence derived from: MDC016058.80:21764..25633- (Malus x domestica
ATGTGGTATGCTGTCTCTGCCCCAAACTATTGCATATCATATCCGAGAAG
ACCTTGCAGCCCTCCTTCTCTRAGGAAGTATTCGGTTTCCACAAGTTTWC
GTGTGAARGCTTSCTTACCGGATAATACCAATGGYGCTAAAGTGGAGTAC
ACTCCTTGGCTGATTGTTGGATTGGGTAACCCTGGCAACAAGTACCATGG
GACTAGGCACAATGTAATATTCCACCTTTATAAACTAGTTTAAGTGTTTC
GGTTGAATTCTTTTTCATTACCCTTTGTTTCCTGTGGGTTTTGTACACCA
GATTGGTTTCGAGATGATTGATGGTATTGCTAAAGCAGAAGGCATTGCGA
TGAATACAATACAGTCGAAGGCCTTGATTGGAATAGGTGGGTCTTCAGTA
GTATTTTAAGTGTTTCAATTCTTGTTTTTCAATTCCACATTTTCATGTGT
TTTGGTGTTCATTTAGATTCTTYTCTGTGATCAGTACAGGCTCCATTGGA
GAAGTACCAATTTTGTTGGTGAAGCCTCAAGCCTACATGAATTATAGCGG
AGAATCGGTGTGTTCTCATCGTTTCTGTTTGCTYTTTTTGGTGTCAATTT
TGGCTCACATAACTGTTATACACTCCACTACCCMTAAGTGTTCTATGATA
ACTTTGTATTACTTATAACCTAAACTCTGTGAYGTCCCRACGAAAGTGAC
AGGATACTCTATACTGGACAGACCATTAGATTGAGAATCCATAATGTAAA
TTTCTGTTGCACCTAATGGAAGGGTTCAAGTAAACTTCAAAAGGAGCTTT
CRTTTAGTATAATTATTCGTATTTTCCTCAACGCTGCAATCAGTTTTTGA
TGGAAGAAGAGCTGTGTTTCATGAAATACCGTCTTCCAGGAATATGTAAA
AGTAATAATGATTAATTAGCTCCGGAGTGTGCTTTCTGCAATTGATTACA
ATCATTTACCATTCACTCACGTAGAGTTTAACCTGGCTGTGAACTAAGCA
ATGGTGATTTCTATATCATTACATGTTTGAAAATTTCAAACCATATCTTT
CATTGTGGTGTGTAATCAGATGATTGACATTTTCGAGCTCGTGAAAAATT
ATAAGACTGATCAATTTTGTTGGCAAAATGGAATAACGTGATGAAGCGAT
GTGCCATTTTCATAAATATTTTTCTTCATGTTCATGTTTATGGGTTTAGC
CGACCCCACTTAGTGGGAAAAGGCTTTGTTGTTGTTGTTGTTGTTGTTGT
TCATGTTTATGGGTGCACTTATGCCAAAATATCCATGAGCATCATAGTAT
GTATCTCCTTTTCTTTAGTTGAATGAGTAAATGCCAGTGTGATTAGAGCT
ACCTTACGATTGCATTTTTCCATCACTTATTCTCCTTTYRTTATTCTTAA
GGTTGGACCACTTGCGGCATATTATCAAGTACCCCTACGCCATATTTTAC
TGGTATGCATTTTTTGTATCTTAATGTCAGCTTTACAAGATTAATAAATT
CCTTTCTTTAATTTAGTTCATCAAGTTCAATGTCRCATTACATWAATGGG
AGCCATGGACTTGTAGGTTTAYGATGAGATGAGCTTACCAAATGGTGTTC
TGAGGATTCAGCCAAAAGGTGGWCATGGCTATCACAATGGGTATGTGTGA
ATATTAATTTTGAACAGAATTCATATGAAAATTTATCTATCACTTTCCTC
TGTTCTTGAATAAATATGTTTTCAAAATCAAGAAAAAGTAGTTTGATTCT
TTTATCTCTTAACGATGCATAATGTTAGTTTGTCCAACTAGTTTCTGACT
TAGAATTGAAGATTCTATAACTATAATTAACMTACTAAATGAGGTGGATT
CTATRGTAAATTATATTTTCYGTGKTATGTTCTRATTGATGTCTTTCACG
AGAGCTGCTAAATTAACYGTGTTGAMATTCCTAATGAACAAGTATTAARG
ACAKTTTCTCAATTTTTGCAWTCTGTAYMCTGTGAAGGTACGTTTGCAYR
GATGCTTTCTGTAGTCCATTGTTAGTAAGTTTTCATGTACCATTGTGAYT
AAGTTCCATGCTTATTAARAAGGATATGGAGCAGGAATCTTACTAGATTC
AATTAGAGRTGTATTAGTGGTGATGTCATAAGAAGAAGTWAAAGTAAGKG
GTTTKAGGTTCTTAGTGTTGGCTGAATAGCAAGTGGATGAAGAAACACCC
TGTTCGTGTCCTTTTATCTATAGATTCCGAACTAGAAATTAAATAAACAT
TATACTGATTCTAGAAAGGGATACTTCAGTCTCAWATTTTAGCTACCCAT
ACTTAATTTGACGGGTTTGACAGTTTGGCTACAGAAAACCGAKATTTTTY
CTGTAGATTGTTTAGTTGTTTACMTTTAAGCCTTTATTTCMTTGCAAAAT
CAAAGGGTAACYATGCATCACTTTGTTTTTTTTTGGTTACAACYATGCAT
CACTTTTCCTTGATATGCTTAGRAAAAAAGAAAAAGCCAATCTGGCTCRG
ATGATTTAGTWTAGAAGGAAGCAAAGACTATACATAGTCTTTCCGGGGTT
GTTTGTTTGAAATCYTCTCWAAACAAATCTTTCCCTTTTCCATACAGTTA
GAGCTTTAAAAGTCCAAATGAATTTMAATTGCTCTTCTCAGAATCTTGTA
GAAAAATGGTAGAGTCGGGGCACACTCAAAGTTGTTGATATGTGTGCTAC
TGGGTTTTATGTGAATTTGTGGTTAGGTGAAGTTATAGACTGGAGGTTGT
TTGATAATATTGGAAGTGGCAACAGTAACATTTTATCTGTCTCAGAAAAA
TTGTGCTTGGCGTGGATCATTTGAAAGTCAAACTCTTCTCTAGCTTGTTA
GGGTTGCATATTTTCCTGTCCTTATTAAACCACTACTTTTTTATCTGCCA
TTTATGTTCCCTGATTCTTGTTTACCCAATGCTTGGCCATGAAGAAAGGA
AAAGATTTAACCCAACTCGTACTGCCCCTAACCAAAATTACATTTTGTTC
TTATTAGCTTTCTATTGGTAAGCAAACGCAAAAAAAATTAAAACTTCTGT
TTCTTTTGTTTCTTCCTCTTTTTCTCTCTTATTTTCTCTTCTCTCTAGTT
GAAAGCATACGGAAGGCAGGAAGGAAAGAAWATAATTATGAACAGCTTGA
ACTTRATTGTCYTGTGACACATTCTTTYAGAAATGCTGATCCACGTAACT
CCRTATCAGGCAATACAAAACTGAKTAATAACGYGTCTGCTGAATCCCGC
TYCTCTCATGTTCCAAWCTTTTTATAATTGYTTTCTCCTTGTTGCAGTGT
AAAAAGTGTAATGGGCCATCTGGACGGTTGYCGTGAATTTCCTCGGCTGT
GTATAGGTTTGTTTCTTCAGTASTATTTTCAACYRWTRGTTARGTGTCTT
AGTCCAAAAGGGTCTATACTTGCCTTAATTGGAAACTAAAAGAGGAGTAT
GAATTATGTTTCAGGTATTGGAAATCCACCTGGAACTATGGACATGAAAG
CCTATCTTCTACAGAGATTCAGTACAGTCGAGAGACATCAGGTWTATCGT
YGTTTCTAAATAGTTCTGACTCATGGTATTAAGGAAATTCATTGATCACT
TAAATGGTCAGAAAATATTTGCTTGCCCACACGCTCGCCATGCACATTCA
AATGTTCACGCATCTGCAATTTACRTTGTCTGTTCACTTGAATTGGTGTG
AATTTCAACCTGTAATATCAAATTTGACCRATATCTGCTATATATGTGAA
CAGATTGATGCAGCACTGGATCAAGGGGTTGAAGCTGTAAGGACCCTGGT
GCTGAATGGATTTGACCAGAGCATCACTAGTTTTAATTTGAGGCAGAAAT
ACAAATATCACAAAGTGTAA

Coding sequence (CDS) from alignment at MDC016058.80:21764..25633-

>MDP0000435964 ID=MDP0000435964; Name=MDP0000435964; organism=Malus x domestica; type=CDS; length=597bp; location=Sequence derived from: MDC016058.80:21764..25633- (Malus x domestica
ATGTGGTATGCTGTCTCTGCCCCAAACTATTGCATATCATATCCGAGAAG
ACCTTGCAGCCCTCCTTCTCTRAGGAAGTATTCGGTTTCCACAAGTTTWC
GTGTGAARGCTTSCTTACCGGATAATACCAATGGYGCTAAAGTGGAGTAC
ACTCCTTGGCTGATTGTTGGATTGGGTAACCCTGGCAACAAGTACCATGG
GACTAGGCACAATATTGGTTTCGAGATGATTGATGGTATTGCTAAAGCAG
AAGGCATTGCGATGAATACAATACAGTCGAAGGCCTTGATTGGAATAGGT
GGGTCTTCAGTTTAYGATGAGATGAGCTTACCAAATGGTGTTCTGAGGAT
TCAGCCAAAAGGTGGWCATGGCTATCACAATGGGAGTATGAATTATGTTT
CAGGTATTGGAAATCCACCTGGAACTATGGACATGAAAGCCTATCTTCTA
CAGAGATTCAGTACAGTCGAGAGACATCAGATTGATGCAGCACTGGATCA
AGGGGTTGAAGCTGTAAGGACCCTGGTGCTGAATGGATTTGACCAGAGCA
TCACTAGTTTTAATTTGAGGCAGAAATACAAATATCACAAAGTGTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001328	Pept_tRNA_hydro
IPR018171	Pept_tRNA_hydro_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0004045	aminoacyl-tRNA hydrolase activity