MDP0000482907, MDP0000482907 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000482907
Unique Name	MDP0000482907
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	4584

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr15	chromosome	chr15:8207238..8211821 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC018282.133	contig	MDC018282.133:377..4960 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000482907_exon_1	MDP0000482907_exon_1	Malus x domestica	CDS
MDP0000482907_exon_2	MDP0000482907_exon_2	Malus x domestica	CDS
MDP0000482907_exon_3	MDP0000482907_exon_3	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000482907	MDP0000482907	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain, cyclin-like	PFAM	PF00646	F-box	coord: 5..43 score: 1.3
IPR001810	F-box domain, cyclin-like	SMART	SM00256	A Receptor for Ubiquitination Targets	coord: 7..47 score: 5.6
IPR001810	F-box domain, cyclin-like	SUPERFAMILY	81383	F-box domain	coord: 5..48 score: 1.6
IPR006527	F-box associated domain, type 1	PFAM	PF07734	FBA_1	coord: 230..369 score: 8.5
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	F_box_assoc_1: F-box protein interaction domain	coord: 119..332 score: 2.5
None	No IPR available	GENE3D	1.20.1280.50	no description	coord: 5..43 score: 5.5
None	No IPR available	SEG	seg	seg	coord: 46..62 score: NAcoord: 86..99 score
None	No IPR available	SEG	seg	seg	coord: 31..47 score
None	No IPR available	SEG	seg	seg	coord: 32..43 score
None	No IPR available	SEG	seg	seg	coord: 5..13 score: NAcoord: 21..36 score
None	No IPR available	SEG	seg	seg	coord: 48..61 score
None	No IPR available	SEG	seg	seg	coord: 19..35 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:8207238..8211821-
mRNA from alignment at MDC018282.133:377..4960-
coding sequence from alignment at MDC018282.133:377..4960-

mRNA sequence

>MDP0000482907 ID=MDP0000482907; Name=MDP0000482907; organism=Malus x domestica; type=mRNA; length=4584bp
ATGGCAAAGTCGAGTAATTTGACGGATGATATGGTGGTGCAAATCCTGTC
TCGATTACCACCAAAATCTTTGATGCGATTCAAATGCGTCCACAAGCTGT
GGTGTGATCTAATTGATAGTCCTAGCTTTGTGGCGAGTCACCTTTCTAAC
TCGAATTTGAAATCGAAATCAGATTCCTCCACCAGCATTGTTGTAAAACA
TACTGTTAAAAATGTGGAGGATGATAGGAAGCACGTTTTATTGTCATTGC
TTAATGTTTGCAAGGATGTTAGCGACGATGATGACCGTGTTGAGGATCTT
GGTGCTGTGTATCCTTTGCTGAGTATATCTTCCCCTAATTTTGAAATTGC
GGGTTATTGTGATGGGATTTTTTGTCTAAGTCTTCACTTGTGTCCCGAGG
ATATTGCTTTAGTCAATCCAGCTATCATGGAATTTCAGTTTCTTCCCAAG
TCTTGTCTGCTCCTCCCTCCCCCACAACCAGATGTTGCTGATGGAGTGGA
TACCATTACCAATGCCATCGGATTTGGGTATGATTCCAAAGCTGAAACRT
ACAAGGCGGTTAGAATTGTGAAATTTTTGCCAGGGCCTAGAAAAGCAGAG
GTATGCACTTTAGGTGCTGATTCTTGGAGAGAGGTCAAGTTTGAAATCGA
TTGTTCTGTCATCTGGACACCTTCTTTTTATTTCTACTTCAAGGGGGTTT
TTTATTGGTTTGCTACGGATCTCCATAATAACGATTTCATCCTTACATTT
GATATGGGTGAGGAGGTATTTCGTAATATACCAGTTCCGTATGATTCCCT
GGAGAGATTTGCATGGAATTGCAGCCTTGCAGTATGGAATGAATCCATTG
CTTTGTTTTGCTACTGCAAAGATGAAGGAACTGGACTTTCTATCTTTGAT
ATATGGGAGATGGATGATTCTACCGATGGGGTAAAAAGTCCGTGGAGTAA
GAAACGCTTAACAATCGAATCTGTACCAAGTATAGAGATTCCATTGGTAT
TTTGGAAGAATGACGAGCTTCTTCTGACGGCCACTGAYGGATGTGTTGTC
TCCTWTAACATACGCACTCAAAAGCTCAAAGACCTTCCTATTCATGGCAT
TGAAAATCCACTATATATTCAAGCTGTTCTTTATGCAGAAAGCYTTGTTT
CTGTCAGGGGMGGCAGCCAGCCTCTGGCTATAGACCCAAACAGATCCACT
GGAAGGTWTGTAATGTTTTTCCTTCGCGTGTTTTTGCTTTTATACATTAA
TTAGTGTTTAAATTTTGATGTTATATACCCGTCTTTGGGAGGTGTTGTTT
GTTCCCTCCAGTTCTTCATGATTATAACAAAATCAGATGTTGTTCCTGTT
GGAATTTTGCAAACTAGATAGAGGTTCTCTACTTTTAATTTTTCTTTTCT
TTTCAGTAACATGCTTCTGAAAGAAAACAAGATTGTTTAGGTTTTCGTTC
ATTCTGATTCACTTACCTTATCTTGTGTACATTCATGTGCGTGCTCTTAT
GTTTTTTTCCCAATTACTTAAATCYAGTGTATCGTTCGAGTTGTACTTTT
ACCCGAGGCATGTATGAGCTTATGCACTGGAAATGGCTAAGCTGCTGGAT
CTCAGGAAAGAGTACGTTGGGGATATCGCGTGAGGAAAATGTATGTACTT
GTTTCTCTTGTTCTACTTGAATTTCGTTGTTGTGGTGAAGGCGTATTTTG
AAATGTTAATTAGGCTAAGTCGCAAAGACATTGCTGACTTTGGTTGTTGA
TGTTTTCTTCTCTATCTTACGAACTCTCGATATCGTCTTAAAATTTAGAT
TTACCTTTTCAACTTCATTGTATGGAATTTGGTTTTCTGTTTTAATGGAG
CGAACTCTATTTTCATTACAGATTACATTGCAGCTCCTGTATTTTATAAA
ATCTAGAGGCCCAGCTCCGATCATCGTCATTTTCGGCAGGCCTTAACCGC
AACGGTCTTGTTACATGTTATGCCCAAACTTTTGAACTGACCGGCTTAAA
CCCATAATGCTTGGGTTGGCTAATCAGAATCTGTTCGTGTCCAATCTGAT
TTCAAACTCGATTGAGCGGGTTAGAATGAAGAAAATATTTGCCCAAATTT
AACCTGACCTCAATCCAATCGTTTATTGGGTTGGGTTGATGCATTTCCGG
TCCATGTCAACCCAAATTTAACTCCATTTTAAGCCCAAATTCAGGGCTGG
TTTGGTATTGCTGTGCTTTGAAAAAAAGCTGCTGTGAGAATAAGCGGCTG
TGCTGTGAGAATAAGCGGCTGTGAAATAAAGCCAGTAGAGTGTTTGGTAA
ATTTTTTTGTGAAAGTGCTTTTGGAAAAAAAAAAGCAGGATGATAGTGTG
TCTTTTCATTAAAGGAGCACTGTAGCTCCGTGTGCTTTGAAAAAACTGGC
TTTTTTTCAAAGCAGCAAATAGCAGCTTCAACTTTTCCTTTGATTTTCAG
CTTATTCTCACAGCAGCTTACAAAATAAGCCCTTTTTTTTCAGTTTACCA
AACACAAAAATGACCCTCAGCTTTTTTTCACAGTGGCTTTTTTTAAAATC
ACCTCAATCCCAAACGGGGCCTCACTCATGCACATATTATCTATCCCATT
CATATTATTTGAGTCATTGATAAGTTTTTGAGTGACTATATCTGAAGTTT
ATTAGCAGTTTTCATATGAATAATGAATGATACTATTACTTTTACATTTC
TTTTGGTTGAAGCTTTTGGCATACGTCTTGTAATTTAATTTCAACTTTGC
MTGGTTTAATTAGTAGGCCAAGTTGTCTTCTCTAATTTTTGTTTGGATAG
TGATGTATAAATGGTATTTTAACCAATATTGGAGTTGTTTGGTTCAAAAA
TTTAAAAAATCATAAAAAAATACAATTTTATAAGATGAACTCGATAAGTT
GGGTGTAYAGTGTACCCGAACCCAACCCGAGTAAGTCYRAACTCTATTAA
AACTTGAACCCAACTWAACCCCCATGAACCCGAACTCAACCCAAGCCCGA
ATCATGAAGGTTGGGTTAGGGTTTGGTTGACCATCCAACTGTCTAATTYG
TYCGAGTTGCAYCCCTAACTTAAGCTAGGACATTTACGACCTTCAAATTT
CTCTATAGAAAGAAGTTTTCAAGAAAGTGCTTTTATTTGAAGCACGTTAA
ATCRATGAGTGAGATATGCTTTRTTATTTGGTTAGGAGTTCARCAACTCG
YCGAAAGAGTCTCATGATACGAAGATAGGTTGTCAAGAACATAGAAGAKK
TYWGTTAGTTAGTTGGTCAGGTCTAATGTGGATCTCACATGACAGTAGTT
GGAGCTGGCAACTCTTTTAGAGTTCCCTCATTTGGAATATGYGGGTAAAA
KAATCAAGYTGGCTCTTGTGAACAACTTGATGCACTCATTTTGAGYTAAA
TCATTTCCACTTTTAGAGATCACCCCAAAAGTTCAAGTAGTTCTTGAAAA
AAAAGACACAATGAAAGAAAGCAYTGTGTTTCTTTTTTTTTAACTAGAAG
CACTCTTAGCTAAAACAATTTCACCAAAAACATTATCAAAAGCGTTTTTA
ATTATCTTAAAATGCTCCTAAACTAYTCTAAATAYGACCGAGAGAAAACG
ACTCATCCAAAAAAGAATGGAGTGGAAGATGATACTTAATGGATTGTTAA
CTTATTWAACATGTTCTAGAGTTTGGCAGGTGGATATATTGGTTACCAAT
CCTCCATTTCTCATCTTATGATTGAGCCTATTATATATAATGATACTGAT
TGATGYATCTAACATTTCCATAATCTCAAAAAAGGACRAGACTAACGATG
ATTAAAGCAAATTGCCAAGACTGGTAGTTTTTTTATGAGCATCATTTACC
ACGTGTCACATTTAGATATAGCTTGTYAATTAATTAGGTTAATATAGCAC
AAAGAGAGGGACTGATCAAGAATTAGGCAGATTGATTAAAGAAACACGTG
GATGGCCCTGATGAATACAACTATAGAGAAAAMTTCAGATTATCARATGC
GTGGGAGACTTCGTCTTCTTAAACTTGATTAGCAAATGAATGAGTAATGC
TAGAAAATCACACATTTATGCATTTTGTACACTTGTCTTTATAAAACCAA
CTTTCGTTAGCTTCTTAAGATTTATGGATGAAACTTCAAGCGTAAATATT
ATGCATCTGCTAGTATTTTTATCGTTTTCGTTTTCATTTTCAAGTGTAAA
TATTCAATAAAAATTACTTTTTAAATTCAATAAATAGTTAGGCCGCTTTT
AAGATGGCTTCTATATTCCTTAACTCGTACACAGAAGACGATTGTGAACA
CGGAAAATTCCTGAAACGAAAGAGACAAGAATAACGTGCACAAAATAATA
TTTGTGTTTTTTATTTTTGGGGTTACAATCTCTCTCTAATTTGATCATCT
GATTCGATCTCCGTAAGATGTTGATTTGTGGATGTGCGATTGATCCAAAG
GGCCGTTGGGCTTGATCTAAGGATGAACGTTCTTCAAGGGCCGTGGGCTT
GATCTTGAAGGTGGATTTGATCGGATCTTCAAGGAGCCGTTGGGGCTTGA
TCTTGAGGATGAGCGTTTCTTCAAGGGCCGTTGA

protein sequence of MDP0000482907

>MDP0000482907 ID=MDP0000482907; Name=MDP0000482907; organism=Malus x domestica; type=polypeptide; length=467bp
MAKSSNLTDDMVVQILSRLPPKSLMRFKCVHKLWCDLIDSPSFVASHLSN
SNLKSKSDSSTSIVVKHTVKNVEDDRKHVLLSLLNVCKDVSDDDDRVEDL
GAVYPLLSISSPNFEIAGYCDGIFCLSLHLCPEDIALVNPAIMEFQFLPK
SCLLLPPPQPDVADGVDTITNAIGFGYDSKAETYKAVRIVKFLPGPRKAE
VCTLGADSWREVKFEIDCSVIWTPSFYFYFKGVFYWFATDLHNNDFILTF
DMGEEVFRNIPVPYDSLERFAWNCSLAVWNESIALFCYCKDEGTGLSIFD
IWEMDDSTDGVKSPWSKKRLTIESVPSIEIPLVFWKNDELLLTATDGCVV
SXNIRTQKLKDLPIHGIENPLYIQAVLYAESXVSVRGGSQPLAIDPNRST
GSCTFTRGMYELMHWKWLSCWISGKSTLGISREENGRGLDLEGGFDRIFK
EPLGLDLEDERFFKGR*

mRNA from alignment at chr15:8207238..8211821-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000482907 ID=MDP0000482907; Name=MDP0000482907; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr15:8207238..8211821- (Malus x domestica

mRNA from alignment at MDC018282.133:377..4960-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000482907 ID=MDP0000482907; Name=MDP0000482907; organism=Malus x domestica; type=mRNA; length=4584bp; location=Sequence derived from: MDC018282.133:377..4960- (Malus x domestica
ATGGCAAAGTCGAGTAATTTGACGGATGATATGGTGGTGCAAATCCTGTC
TCGATTACCACCAAAATCTTTGATGCGATTCAAATGCGTCCACAAGCTGT
GGTGTGATCTAATTGATAGTCCTAGCTTTGTGGCGAGTCACCTTTCTAAC
TCGAATTTGAAATCGAAATCAGATTCCTCCACCAGCATTGTTGTAAAACA
TACTGTTAAAAATGTGGAGGATGATAGGAAGCACGTTTTATTGTCATTGC
TTAATGTTTGCAAGGATGTTAGCGACGATGATGACCGTGTTGAGGATCTT
GGTGCTGTGTATCCTTTGCTGAGTATATCTTCCCCTAATTTTGAAATTGC
GGGTTATTGTGATGGGATTTTTTGTCTAAGTCTTCACTTGTGTCCCGAGG
ATATTGCTTTAGTCAATCCAGCTATCATGGAATTTCAGTTTCTTCCCAAG
TCTTGTCTGCTCCTCCCTCCCCCACAACCAGATGTTGCTGATGGAGTGGA
TACCATTACCAATGCCATCGGATTTGGGTATGATTCCAAAGCTGAAACRT
ACAAGGCGGTTAGAATTGTGAAATTTTTGCCAGGGCCTAGAAAAGCAGAG
GTATGCACTTTAGGTGCTGATTCTTGGAGAGAGGTCAAGTTTGAAATCGA
TTGTTCTGTCATCTGGACACCTTCTTTTTATTTCTACTTCAAGGGGGTTT
TTTATTGGTTTGCTACGGATCTCCATAATAACGATTTCATCCTTACATTT
GATATGGGTGAGGAGGTATTTCGTAATATACCAGTTCCGTATGATTCCCT
GGAGAGATTTGCATGGAATTGCAGCCTTGCAGTATGGAATGAATCCATTG
CTTTGTTTTGCTACTGCAAAGATGAAGGAACTGGACTTTCTATCTTTGAT
ATATGGGAGATGGATGATTCTACCGATGGGGTAAAAAGTCCGTGGAGTAA
GAAACGCTTAACAATCGAATCTGTACCAAGTATAGAGATTCCATTGGTAT
TTTGGAAGAATGACGAGCTTCTTCTGACGGCCACTGAYGGATGTGTTGTC
TCCTWTAACATACGCACTCAAAAGCTCAAAGACCTTCCTATTCATGGCAT
TGAAAATCCACTATATATTCAAGCTGTTCTTTATGCAGAAAGCYTTGTTT
CTGTCAGGGGMGGCAGCCAGCCTCTGGCTATAGACCCAAACAGATCCACT
GGAAGGTWTGTAATGTTTTTCCTTCGCGTGTTTTTGCTTTTATACATTAA
TTAGTGTTTAAATTTTGATGTTATATACCCGTCTTTGGGAGGTGTTGTTT
GTTCCCTCCAGTTCTTCATGATTATAACAAAATCAGATGTTGTTCCTGTT
GGAATTTTGCAAACTAGATAGAGGTTCTCTACTTTTAATTTTTCTTTTCT
TTTCAGTAACATGCTTCTGAAAGAAAACAAGATTGTTTAGGTTTTCGTTC
ATTCTGATTCACTTACCTTATCTTGTGTACATTCATGTGCGTGCTCTTAT
GTTTTTTTCCCAATTACTTAAATCYAGTGTATCGTTCGAGTTGTACTTTT
ACCCGAGGCATGTATGAGCTTATGCACTGGAAATGGCTAAGCTGCTGGAT
CTCAGGAAAGAGTACGTTGGGGATATCGCGTGAGGAAAATGTATGTACTT
GTTTCTCTTGTTCTACTTGAATTTCGTTGTTGTGGTGAAGGCGTATTTTG
AAATGTTAATTAGGCTAAGTCGCAAAGACATTGCTGACTTTGGTTGTTGA
TGTTTTCTTCTCTATCTTACGAACTCTCGATATCGTCTTAAAATTTAGAT
TTACCTTTTCAACTTCATTGTATGGAATTTGGTTTTCTGTTTTAATGGAG
CGAACTCTATTTTCATTACAGATTACATTGCAGCTCCTGTATTTTATAAA
ATCTAGAGGCCCAGCTCCGATCATCGTCATTTTCGGCAGGCCTTAACCGC
AACGGTCTTGTTACATGTTATGCCCAAACTTTTGAACTGACCGGCTTAAA
CCCATAATGCTTGGGTTGGCTAATCAGAATCTGTTCGTGTCCAATCTGAT
TTCAAACTCGATTGAGCGGGTTAGAATGAAGAAAATATTTGCCCAAATTT
AACCTGACCTCAATCCAATCGTTTATTGGGTTGGGTTGATGCATTTCCGG
TCCATGTCAACCCAAATTTAACTCCATTTTAAGCCCAAATTCAGGGCTGG
TTTGGTATTGCTGTGCTTTGAAAAAAAGCTGCTGTGAGAATAAGCGGCTG
TGCTGTGAGAATAAGCGGCTGTGAAATAAAGCCAGTAGAGTGTTTGGTAA
ATTTTTTTGTGAAAGTGCTTTTGGAAAAAAAAAAGCAGGATGATAGTGTG
TCTTTTCATTAAAGGAGCACTGTAGCTCCGTGTGCTTTGAAAAAACTGGC
TTTTTTTCAAAGCAGCAAATAGCAGCTTCAACTTTTCCTTTGATTTTCAG
CTTATTCTCACAGCAGCTTACAAAATAAGCCCTTTTTTTTCAGTTTACCA
AACACAAAAATGACCCTCAGCTTTTTTTCACAGTGGCTTTTTTTAAAATC
ACCTCAATCCCAAACGGGGCCTCACTCATGCACATATTATCTATCCCATT
CATATTATTTGAGTCATTGATAAGTTTTTGAGTGACTATATCTGAAGTTT
ATTAGCAGTTTTCATATGAATAATGAATGATACTATTACTTTTACATTTC
TTTTGGTTGAAGCTTTTGGCATACGTCTTGTAATTTAATTTCAACTTTGC
MTGGTTTAATTAGTAGGCCAAGTTGTCTTCTCTAATTTTTGTTTGGATAG
TGATGTATAAATGGTATTTTAACCAATATTGGAGTTGTTTGGTTCAAAAA
TTTAAAAAATCATAAAAAAATACAATTTTATAAGATGAACTCGATAAGTT
GGGTGTAYAGTGTACCCGAACCCAACCCGAGTAAGTCYRAACTCTATTAA
AACTTGAACCCAACTWAACCCCCATGAACCCGAACTCAACCCAAGCCCGA
ATCATGAAGGTTGGGTTAGGGTTTGGTTGACCATCCAACTGTCTAATTYG
TYCGAGTTGCAYCCCTAACTTAAGCTAGGACATTTACGACCTTCAAATTT
CTCTATAGAAAGAAGTTTTCAAGAAAGTGCTTTTATTTGAAGCACGTTAA
ATCRATGAGTGAGATATGCTTTRTTATTTGGTTAGGAGTTCARCAACTCG
YCGAAAGAGTCTCATGATACGAAGATAGGTTGTCAAGAACATAGAAGAKK
TYWGTTAGTTAGTTGGTCAGGTCTAATGTGGATCTCACATGACAGTAGTT
GGAGCTGGCAACTCTTTTAGAGTTCCCTCATTTGGAATATGYGGGTAAAA
KAATCAAGYTGGCTCTTGTGAACAACTTGATGCACTCATTTTGAGYTAAA
TCATTTCCACTTTTAGAGATCACCCCAAAAGTTCAAGTAGTTCTTGAAAA
AAAAGACACAATGAAAGAAAGCAYTGTGTTTCTTTTTTTTTAACTAGAAG
CACTCTTAGCTAAAACAATTTCACCAAAAACATTATCAAAAGCGTTTTTA
ATTATCTTAAAATGCTCCTAAACTAYTCTAAATAYGACCGAGAGAAAACG
ACTCATCCAAAAAAGAATGGAGTGGAAGATGATACTTAATGGATTGTTAA
CTTATTWAACATGTTCTAGAGTTTGGCAGGTGGATATATTGGTTACCAAT
CCTCCATTTCTCATCTTATGATTGAGCCTATTATATATAATGATACTGAT
TGATGYATCTAACATTTCCATAATCTCAAAAAAGGACRAGACTAACGATG
ATTAAAGCAAATTGCCAAGACTGGTAGTTTTTTTATGAGCATCATTTACC
ACGTGTCACATTTAGATATAGCTTGTYAATTAATTAGGTTAATATAGCAC
AAAGAGAGGGACTGATCAAGAATTAGGCAGATTGATTAAAGAAACACGTG
GATGGCCCTGATGAATACAACTATAGAGAAAAMTTCAGATTATCARATGC
GTGGGAGACTTCGTCTTCTTAAACTTGATTAGCAAATGAATGAGTAATGC
TAGAAAATCACACATTTATGCATTTTGTACACTTGTCTTTATAAAACCAA
CTTTCGTTAGCTTCTTAAGATTTATGGATGAAACTTCAAGCGTAAATATT
ATGCATCTGCTAGTATTTTTATCGTTTTCGTTTTCATTTTCAAGTGTAAA
TATTCAATAAAAATTACTTTTTAAATTCAATAAATAGTTAGGCCGCTTTT
AAGATGGCTTCTATATTCCTTAACTCGTACACAGAAGACGATTGTGAACA
CGGAAAATTCCTGAAACGAAAGAGACAAGAATAACGTGCACAAAATAATA
TTTGTGTTTTTTATTTTTGGGGTTACAATCTCTCTCTAATTTGATCATCT
GATTCGATCTCCGTAAGATGTTGATTTGTGGATGTGCGATTGATCCAAAG
GGCCGTTGGGCTTGATCTAAGGATGAACGTTCTTCAAGGGCCGTGGGCTT
GATCTTGAAGGTGGATTTGATCGGATCTTCAAGGAGCCGTTGGGGCTTGA
TCTTGAGGATGAGCGTTTCTTCAAGGGCCGTTGA

Coding sequence (CDS) from alignment at MDC018282.133:377..4960-

>MDP0000482907 ID=MDP0000482907; Name=MDP0000482907; organism=Malus x domestica; type=CDS; length=1401bp; location=Sequence derived from: MDC018282.133:377..4960- (Malus x domestica
ATGGCAAAGTCGAGTAATTTGACGGATGATATGGTGGTGCAAATCCTGTC
TCGATTACCACCAAAATCTTTGATGCGATTCAAATGCGTCCACAAGCTGT
GGTGTGATCTAATTGATAGTCCTAGCTTTGTGGCGAGTCACCTTTCTAAC
TCGAATTTGAAATCGAAATCAGATTCCTCCACCAGCATTGTTGTAAAACA
TACTGTTAAAAATGTGGAGGATGATAGGAAGCACGTTTTATTGTCATTGC
TTAATGTTTGCAAGGATGTTAGCGACGATGATGACCGTGTTGAGGATCTT
GGTGCTGTGTATCCTTTGCTGAGTATATCTTCCCCTAATTTTGAAATTGC
GGGTTATTGTGATGGGATTTTTTGTCTAAGTCTTCACTTGTGTCCCGAGG
ATATTGCTTTAGTCAATCCAGCTATCATGGAATTTCAGTTTCTTCCCAAG
TCTTGTCTGCTCCTCCCTCCCCCACAACCAGATGTTGCTGATGGAGTGGA
TACCATTACCAATGCCATCGGATTTGGGTATGATTCCAAAGCTGAAACRT
ACAAGGCGGTTAGAATTGTGAAATTTTTGCCAGGGCCTAGAAAAGCAGAG
GTATGCACTTTAGGTGCTGATTCTTGGAGAGAGGTCAAGTTTGAAATCGA
TTGTTCTGTCATCTGGACACCTTCTTTTTATTTCTACTTCAAGGGGGTTT
TTTATTGGTTTGCTACGGATCTCCATAATAACGATTTCATCCTTACATTT
GATATGGGTGAGGAGGTATTTCGTAATATACCAGTTCCGTATGATTCCCT
GGAGAGATTTGCATGGAATTGCAGCCTTGCAGTATGGAATGAATCCATTG
CTTTGTTTTGCTACTGCAAAGATGAAGGAACTGGACTTTCTATCTTTGAT
ATATGGGAGATGGATGATTCTACCGATGGGGTAAAAAGTCCGTGGAGTAA
GAAACGCTTAACAATCGAATCTGTACCAAGTATAGAGATTCCATTGGTAT
TTTGGAAGAATGACGAGCTTCTTCTGACGGCCACTGAYGGATGTGTTGTC
TCCTWTAACATACGCACTCAAAAGCTCAAAGACCTTCCTATTCATGGCAT
TGAAAATCCACTATATATTCAAGCTGTTCTTTATGCAGAAAGCYTTGTTT
CTGTCAGGGGMGGCAGCCAGCCTCTGGCTATAGACCCAAACAGATCCACT
GGAAGTTGTACTTTTACCCGAGGCATGTATGAGCTTATGCACTGGAAATG
GCTAAGCTGCTGGATCTCAGGAAAGAGTACGTTGGGGATATCGCGTGAGG
AAAATGGCCGTGGGCTTGATCTTGAAGGTGGATTTGATCGGATCTTCAAG
GAGCCGTTGGGGCTTGATCTTGAGGATGAGCGTTTCTTCAAGGGCCGTTG
A

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR006527	F-box-assoc_dom_typ1
IPR017451	F-box-assoc_interact_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding