MDP0000558202, MDP0000558202 (mRNA) Malus spp. (apple)

Transcript Overview
NameMDP0000558202
Unique NameMDP0000558202
TypemRNA
OrganismMalus x domestica (Apple)
Sequence length1277
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation2012-07-26
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MDP0000558202_exon_1MDP0000558202_exon_1Malus x domesticaCDS
MDP0000558202_exon_2MDP0000558202_exon_2Malus x domesticaCDS
MDP0000558202_exon_3MDP0000558202_exon_3Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MDP0000558202MDP0000558202Malus x domesticapolypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>MDP0000558202 ID=MDP0000558202; Name=MDP0000558202; organism=Malus x domestica; type=mRNA; length=1277bp
ATGGATCCGAAAGCATTCTTGCTGCAAAAATTTAATGCCACAGCTCAAGG
ACGAGTAAGTATATTTTGGTTGTGTATTTGTCTCAAACAACATTTCTTAA
CACATCCATATTCTTAGTTTGTTTCTCCTATTGCATTACAACAATTACCA
GATACTTAGAATTTATAAAAAGTATATTTTGAAGGATTAYACTACCGTTT
GTTTGCTTGTTATTTACTGATTCAACTGTGGATAAGACGTTAATTAAGGA
GGTAGTCCTAGCTGTTTAGAAAACTATATGAAATCTGATCTTTGTAAGAT
CCATTCATTCCAAATGGATTGCATTCATTTTAAATTTGGCCAAGTATTAT
CGAATCCTGCATTTTACGTAATTGGACTTGTTTTCTGCTTAACAATTTGA
TGTCTAATCTTTATCTGGTTTATGTTATCATTCCTTATATCCTAATGTAA
GTCTGGTAATTACTTGGAGGGATAATGATGATGTGCCTGTTTGATCTAGA
TTGATGCTGCTTTGCAAGAGGGAGTTAATATATTGAAGGTCGTGCTTTCT
AAAGGCTTTGCAGAAAGTGCAAGACGCTTCAACTCAGAGCAGAAATACAA
GCATCTAAGAGTAGAAACCTTGCCAACATGAATTTACACAGTGGCATCTG
TAAATGAGTAAATGGGTTTTTGTTTTTTGGGATAACACTTGGGTTGTGAT
TGTCAGAATATATGGAAACTCGACCGGTTGTTGAATCTAAAATCAAGAGG
ACGTACGGGTGTTGCATTGTTGACAATTCATGTCATCGAGTAGGGTTCTA
ACAATCACGGCTAAAGGATTATCCTTTGTTTTGAGATCATCTTTTGTGCT
ATAAATGTGACCCGTCACCCATCAGCTTTAAATTTCTTCAATGAAGGTAG
AGCGATAAACTTGACCCATCATTTCTCAAAGTTTTGCCGGGGAGTAGGAA
GTCGGAAGTCTCAATGTCTCATGACTAGGGGTTGGGATTAGACTTATTAA
CRGATCRGGTTTATCGGGTTTGGGTTGGGTTCAATCTGACCCGTTAAGTT
AACGGGTTATCCGATCGATCCRTTAGCKTAACGGGTCACTTATTTCACCC
GTTAACAATTTTTTTTTTTTTTTKKCATAGAGTTTATTTTTTGTTGTTAA
GATTTKACTGAAATTACTAAAACATCTTCAWCTAAAGGATGCTAACGAGT
TTAACGGGTTGACCCAAAATGACCCGTTATTTAATAGGTTGTTAACGGGT
TCATCCGTTAGCGATCCGACTCGTTAA
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protein sequence of MDP0000558202

>MDP0000558202 ID=MDP0000558202; Name=MDP0000558202; organism=Malus x domestica; type=polypeptide; length=85bp
MDPKAFLLQKFNATAQGRIDAALQEGVNILKVVLSKGFAESARRFNSEQK
YKHLRDANEFNGLTQNDPLFNRLLTGSSVSDPTR*
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mRNA from alignment at chr3:964061..965337+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000558202 ID=MDP0000558202; Name=MDP0000558202; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr3:964061..965337+ (Malus x domestica
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mRNA from alignment at MDC015058.254:9613..10889+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000558202 ID=MDP0000558202; Name=MDP0000558202; organism=Malus x domestica; type=mRNA; length=1277bp; location=Sequence derived from: MDC015058.254:9613..10889+ (Malus x domestica
ATGGATCCGAAAGCATTCTTGCTGCAAAAATTTAATGCCACAGCTCAAGG
ACGAGTAAGTATATTTTGGTTGTGTATTTGTCTCAAACAACATTTCTTAA
CACATCCATATTCTTAGTTTGTTTCTCCTATTGCATTACAACAATTACCA
GATACTTAGAATTTATAAAAAGTATATTTTGAAGGATTAYACTACCGTTT
GTTTGCTTGTTATTTACTGATTCAACTGTGGATAAGACGTTAATTAAGGA
GGTAGTCCTAGCTGTTTAGAAAACTATATGAAATCTGATCTTTGTAAGAT
CCATTCATTCCAAATGGATTGCATTCATTTTAAATTTGGCCAAGTATTAT
CGAATCCTGCATTTTACGTAATTGGACTTGTTTTCTGCTTAACAATTTGA
TGTCTAATCTTTATCTGGTTTATGTTATCATTCCTTATATCCTAATGTAA
GTCTGGTAATTACTTGGAGGGATAATGATGATGTGCCTGTTTGATCTAGA
TTGATGCTGCTTTGCAAGAGGGAGTTAATATATTGAAGGTCGTGCTTTCT
AAAGGCTTTGCAGAAAGTGCAAGACGCTTCAACTCAGAGCAGAAATACAA
GCATCTAAGAGTAGAAACCTTGCCAACATGAATTTACACAGTGGCATCTG
TAAATGAGTAAATGGGTTTTTGTTTTTTGGGATAACACTTGGGTTGTGAT
TGTCAGAATATATGGAAACTCGACCGGTTGTTGAATCTAAAATCAAGAGG
ACGTACGGGTGTTGCATTGTTGACAATTCATGTCATCGAGTAGGGTTCTA
ACAATCACGGCTAAAGGATTATCCTTTGTTTTGAGATCATCTTTTGTGCT
ATAAATGTGACCCGTCACCCATCAGCTTTAAATTTCTTCAATGAAGGTAG
AGCGATAAACTTGACCCATCATTTCTCAAAGTTTTGCCGGGGAGTAGGAA
GTCGGAAGTCTCAATGTCTCATGACTAGGGGTTGGGATTAGACTTATTAA
CRGATCRGGTTTATCGGGTTTGGGTTGGGTTCAATCTGACCCGTTAAGTT
AACGGGTTATCCGATCGATCCRTTAGCKTAACGGGTCACTTATTTCACCC
GTTAACAATTTTTTTTTTTTTTTKKCATAGAGTTTATTTTTTGTTGTTAA
GATTTKACTGAAATTACTAAAACATCTTCAWCTAAAGGATGCTAACGAGT
TTAACGGGTTGACCCAAAATGACCCGTTATTTAATAGGTTGTTAACGGGT
TCATCCGTTAGCGATCCGACTCGTTAA
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Coding sequence (CDS) from alignment at MDC015058.254:9613..10889+

>MDP0000558202 ID=MDP0000558202; Name=MDP0000558202; organism=Malus x domestica; type=CDS; length=255bp; location=Sequence derived from: MDC015058.254:9613..10889+ (Malus x domestica
ATGGATCCGAAAGCATTCTTGCTGCAAAAATTTAATGCCACAGCTCAAGG
ACGAATTGATGCTGCTTTGCAAGAGGGAGTTAATATATTGAAGGTCGTGC
TTTCTAAAGGCTTTGCAGAAAGTGCAAGACGCTTCAACTCAGAGCAGAAA
TACAAGCATCTAAGAGATGCTAACGAGTTTAACGGGTTGACCCAAAATGA
CCCGTTATTTAATAGGTTGTTAACGGGTTCATCCGTTAGCGATCCGACTC
GTTAA
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