MDP0000588137, MDP0000588137 (mRNA) Malus spp. (apple)

Transcript Overview
NameMDP0000588137
Unique NameMDP0000588137
TypemRNA
OrganismMalus x domestica (Apple)
Sequence length1746
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MDP0000588137_exon_1MDP0000588137_exon_1Malus x domesticaCDS
MDP0000588137_exon_2MDP0000588137_exon_2Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MDP0000588137MDP0000588137Malus x domesticapolypeptide


Homology
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|224101457|ref|XP_002312289.1| (predicted protein [Populus trichocarpa] >gi|222852109|gb|EEE89656.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 173.711 bits (439), Expect = 9.209e-42
Identity = 87/110 (79.09%), Postives = 90/110 (81.82%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            AQQ VQKNT+YVGGLAEEVNE+ILHA FIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAAQPI  D+    E
Sbjct:    3 AQQQVQKNTLYVGGLAEEVNEAILHATFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAASAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFE 112
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|388514621|gb|AFK45372.1| (unknown [Medicago truncatula])

HSP 1 Score: 173.326 bits (438), Expect = 1.203e-41
Identity = 87/108 (80.56%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAAQPI  D+    E
Sbjct:    3 QGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFE 110
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|357487649|ref|XP_003614112.1| (Peptidyl-prolyl cis-trans isomerase E [Medicago truncatula] >gi|217073180|gb|ACJ84949.1| unknown [Medicago truncatula] >gi|355515447|gb|AES97070.1| Peptidyl-prolyl cis-trans isomerase E [Medicago truncatula] >gi|388494832|gb|AFK35482.1| unknown [Medicago truncatula])

HSP 1 Score: 173.326 bits (438), Expect = 1.203e-41
Identity = 87/108 (80.56%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAAQPI  D+    E
Sbjct:    5 QGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFE 112
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|356499919|ref|XP_003518783.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max])

HSP 1 Score: 171.785 bits (434), Expect = 3.499e-41
Identity = 85/108 (78.70%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE            ELYGRVLTVNYALPE+IKGGEQGWAAQP+  D+    E
Sbjct:    5 QGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFE 112
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|297844272|ref|XP_002890017.1| (hypothetical protein ARALYDRAFT_471529 [Arabidopsis lyrata subsp. lyrata] >gi|297335859|gb|EFH66276.1| hypothetical protein ARALYDRAFT_471529 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 169.859 bits (429), Expect = 1.330e-40
Identity = 84/109 (77.06%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:    7 QQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            QQA+QKNT+YVGGLA+EVNESILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAA P+  D+    E
Sbjct:    7 QQAMQKNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFE 115
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|30683419|ref|NP_563931.2| (ATPase E1 [Arabidopsis thaliana] >gi|110736770|dbj|BAF00346.1| AtE1 [Arabidopsis thaliana] >gi|332190937|gb|AEE29058.1| ATPase E1 [Arabidopsis thaliana])

HSP 1 Score: 169.859 bits (429), Expect = 1.330e-40
Identity = 84/109 (77.06%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:    7 QQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            QQA+QKNT+YVGGLA+EVNESILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAA P+  D+    E
Sbjct:    7 QQAMQKNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFE 115
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|225433902|ref|XP_002265598.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase E [Vitis vinifera] >gi|297743796|emb|CBI36679.3| unnamed protein product [Vitis vinifera])

HSP 1 Score: 169.474 bits (428), Expect = 1.737e-40
Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNESILH+AFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+E            ELYGRVLTVNYALPE+IKGGEQGWAAQPI  D+    E
Sbjct:    3 QPVQKNTLYVGGLAEEVNESILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAAAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 110
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|356498016|ref|XP_003517851.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max])

HSP 1 Score: 167.933 bits (424), Expect = 5.053e-40
Identity = 83/108 (76.85%), Postives = 88/108 (81.48%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNE ILHAAFIPFGDIKDVKTPLDQA+QKHRSFGFVTFLERE            ELYGRVLTVNYALPE+IKGGEQGWAAQP+  D+    E
Sbjct:    5 QGVQKNTLYVGGLAEEVNELILHAAFIPFGDIKDVKTPLDQASQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFE 112
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|255541992|ref|XP_002512060.1| (glycine-rich RNA-binding protein, putative [Ricinus communis] >gi|223549240|gb|EEF50729.1| glycine-rich RNA-binding protein, putative [Ricinus communis])

HSP 1 Score: 167.548 bits (423), Expect = 6.600e-40
Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLA+EVNE+ILHAAFIPFGDIKDVKTPLDQATQKHR+FGFVTFLE+E            ELYGRVLTVNYALPEKIKGGEQGWAAQPI  D+    E
Sbjct:    7 QQVQKNTLYVGGLADEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRAFGFVTFLEKEDAAAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWKDADTWFE 114
[Close]
BLAST of MDP0000588137 vs. NCBI nr
Match: gi|224108872|ref|XP_002314998.1| (predicted protein [Populus trichocarpa] >gi|222864038|gb|EEF01169.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 166.392 bits (420), Expect = 1.470e-39
Identity = 83/100 (83.00%), Postives = 84/100 (84.00%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQP 303
            AQQ VQKNT+YVGGLAEE NESILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVT LERE            ELYGRVLTVNYALPEKIKGGEQGWAAQP
Sbjct:    3 AQQQVQKNTLYVGGLAEEANESILHAAFIPFGDIKDVKTPLDQAKQKHRSFGFVTLLEREVAVAAMGNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQP 102
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01010778001 (assembled CDS)

HSP 1 Score: 169.474 bits (428), Expect = 6.411e-43
Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNESILH+AFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+E            ELYGRVLTVNYALPE+IKGGEQGWAAQPI  D+    E
Sbjct:    3 QPVQKNTLYVGGLAEEVNESILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAAAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 110
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01010785001 (assembled CDS)

HSP 1 Score: 63.5438 bits (153), Expect = 4.954e-11
Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 1 
Query:  220 ELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            ELYGRVLTVNYALPE+IKGGEQGWAA+PI  D+    E
Sbjct:    8 ELYGRVLTVNYALPERIKGGEQGWAARPIWADADTWFE 45
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01007865001 (assembled CDS)

HSP 1 Score: 55.8398 bits (133), Expect = 1.033e-8
Identity = 28/95 (29.47%), Postives = 49/95 (51.58%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQG 288
            A + +  + +++GGL+   +++ L  AF  +G++ + +  +D+ T + R FGFVTF   E            +L+GR + VNYA      GG  G
Sbjct:   33 AIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRARSGGFGG 127
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01018991001 (assembled CDS)

HSP 1 Score: 53.9138 bits (128), Expect = 3.925e-8
Identity = 29/92 (31.52%), Postives = 45/92 (48.91%), Query Frame = 1 
Query:    1 MAQQAVQKN---TMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEK 267
            + Q + ++N   T YVG L  +V E +L   F+  G + +V  P D+ T  H+ +GFV F   E            +LYG+ + VN A  +K
Sbjct:   14 LGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK 105
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01030040001 (assembled CDS)

HSP 1 Score: 52.373 bits (124), Expect = 1.142e-7
Identity = 31/83 (37.35%), Postives = 43/83 (51.81%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            ++VGGLA  V ES     F  FG I DV    D  TQ+ R FGF+T+ E E            EL G+++ V  A+P+++  G
Sbjct:  108 IFVGGLASTVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITY-ESEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPG 189
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01030490001 (assembled CDS)

HSP 1 Score: 51.9878 bits (123), Expect = 1.492e-7
Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            ++V GL+  V+E  L  AF  FGD+ +V+   D+ + + R FGFV F +                 GR L V+YAL EK++GG
Sbjct:   40 LFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKDAMDGKAFLGRPLRVSYAL-EKVRGG 121
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01033897001 (assembled CDS)

HSP 1 Score: 51.6026 bits (122), Expect = 1.948e-7
Identity = 29/91 (31.87%), Postives = 42/91 (46.15%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQP 303
            ++VGGL+    E  L   F  +G + + K  +D+ + + + FGFVTF   E            EL GR + V+YA P    GG    A  P
Sbjct:   36 LFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKARTEMDGKELNGRTIFVDYAKPRADFGGGMPIARGP 126
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01033666001 (assembled CDS)

HSP 1 Score: 50.447 bits (119), Expect = 4.340e-7
Identity = 27/82 (32.93%), Postives = 43/82 (52.44%), Query Frame = 1 
Query:   19 QKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPE 264
            ++N ++VGGL    +E  L  AF  +G I +    +++ T + R FGF+TF +              EL GRV++VN A P+
Sbjct:    5 EENRIFVGGLGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAIREMHGRELDGRVISVNKAQPK 86
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01037771001 (assembled CDS)

HSP 1 Score: 50.0618 bits (118), Expect = 5.668e-7
Identity = 30/83 (36.14%), Postives = 42/83 (50.60%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            ++VGGLA  V ES     F  FG I DV    D  TQ+ R FGF+T+ + E            EL G+++ V  A+P++   G
Sbjct:  108 IFVGGLASTVTESDFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITY-DSEEAVERVLHKTFHELNGKMVEVKRAVPKEHSPG 189
[Close]
BLAST of MDP0000588137 vs. Vitis vinifera
Match: GSVIVT01028394001 (assembled CDS)

HSP 1 Score: 49.2914 bits (116), Expect = 9.669e-7
Identity = 33/108 (30.56%), Postives = 50/108 (46.30%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIK--GGEQGWAAQPIGIDSSVTVESADLA 348
            ++VGGL   + E      F  +G + DV    DQ TQ+ R FGF++F + E            +L G+++ V  ALP+     GG +    Q  G   + T+   DLA
Sbjct:  112 IFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISF-DTEDAVDRVLHKTFHDLNGKLVEVKRALPKDANPGGGGRSGGYQGYGASGANTMPILDLA 218
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.708e-19
Identity = 46/89 (51.69%), Postives = 56/89 (62.92%), Query Frame = 1 
Query:   13 AVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            A  K  +YVGGLAEEV++ +LHAAFIPFGDI D++ PLD  T+KHR F FV F   E            EL+GR + VN A P +IK G
Sbjct:    2 ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEG 90
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 7.708e-19
Identity = 46/89 (51.69%), Postives = 56/89 (62.92%), Query Frame = 1 
Query:   13 AVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            A  K  +YVGGLAEEV++ +LHAAFIPFGDI D++ PLD  T+KHR F FV F   E            EL+GR + VN A P +IK G
Sbjct:    2 ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEG 90
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.708e-19
Identity = 46/89 (51.69%), Postives = 56/89 (62.92%), Query Frame = 1 
Query:   13 AVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            A  K  +YVGGLAEEV++ +LHAAFIPFGDI D++ PLD  T+KHR F FV F   E            EL+GR + VN A P +IK G
Sbjct:    2 ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEG 90
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.708e-19
Identity = 46/89 (51.69%), Postives = 56/89 (62.92%), Query Frame = 1 
Query:   13 AVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            A  K  +YVGGLAEEV++ +LHAAFIPFGDI D++ PLD  T+KHR F FV F   E            EL+GR + VN A P +IK G
Sbjct:    2 ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMRIKEG 90
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.170e-15
Identity = 38/84 (45.24%), Postives = 52/84 (61.90%), Query Frame = 1 
Query:   22 KNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIK 273
            K T+YVGGLA+EV E +L+ AFIPFGDI D++ P D  +Q+HR F F+ + + E            EL GR + VN A P ++K
Sbjct:    5 KRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAIDNMNDSELCGRTIRVNLAKPVRVK 88
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: PPIE_RHIO9 (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=cyp10 PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 5.008e-10
Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 1 
Query:   22 KNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYA 255
            K T+Y+ GL ++VNE++LHAAFIPFG+I  V+   D    +   HR FGFV +   E            ELYG+V+ V  A
Sbjct:   11 KTTLYISGLDQQVNEAVLHAAFIPFGEIIAVQMATDTEIDSNNIHRGFGFVEYELAEDCQAAMDNMHLSELYGKVIKVQLA 91
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: SF3B4_CAEEL (Splicing factor 3B subunit 4 OS=Caenorhabditis elegans GN=sap-49 PE=1 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 1.233e-8
Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 1 
Query:   19 QKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYA 255
            Q  T+YVGGL E+V+ESIL    +  G +  V  P D+ T  H+ FGFV F+  E            +LYG+ + VN A
Sbjct:   11 QDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKA 89
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: SF3B4_RAT (Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.687e-8
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 1 
Query:   19 QKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYA 255
            Q  T+YVGGL E+V+E +L   F+  G + +   P D+ T +H+ +GFV FL  E            +LYG+ + VN A
Sbjct:   11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKA 89
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: SF3B4_MOUSE (Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.687e-8
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 1 
Query:   19 QKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYA 255
            Q  T+YVGGL E+V+E +L   F+  G + +   P D+ T +H+ +GFV FL  E            +LYG+ + VN A
Sbjct:   11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKA 89
[Close]
BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Match: SF3B4_HUMAN (Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.687e-8
Identity = 29/79 (36.71%), Postives = 43/79 (54.43%), Query Frame = 1 
Query:   19 QKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYA 255
            Q  T+YVGGL E+V+E +L   F+  G + +   P D+ T +H+ +GFV FL  E            +LYG+ + VN A
Sbjct:   11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMNMIKLYGKPIRVNKA 89
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: B9HIG1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832663 PE=4 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.048e-41
Identity = 87/110 (79.09%), Postives = 90/110 (81.82%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            AQQ VQKNT+YVGGLAEEVNE+ILHA FIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAAQPI  D+    E
Sbjct:    3 AQQQVQKNTLYVGGLAEEVNEAILHATFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAASAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFE 112
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: B7FJM0_MEDTR (Peptidyl-prolyl cis-trans isomerase E OS=Medicago truncatula GN=MTR_5g044970 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.368e-41
Identity = 87/108 (80.56%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAAQPI  D+    E
Sbjct:    5 QGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFE 112
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: I1JEH5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.981e-41
Identity = 85/108 (78.70%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE            ELYGRVLTVNYALPE+IKGGEQGWAAQP+  D+    E
Sbjct:    5 QGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFE 112
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: Q0WRA3_ARATH (ATPase E1 OS=Arabidopsis thaliana GN=ATE1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.513e-40
Identity = 84/109 (77.06%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:    7 QQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            QQA+QKNT+YVGGLA+EVNESILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAA P+  D+    E
Sbjct:    7 QQAMQKNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFE 115
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: D7KQI8_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471529 PE=4 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.513e-40
Identity = 84/109 (77.06%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:    7 QQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            QQA+QKNT+YVGGLA+EVNESILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAA P+  D+    E
Sbjct:    7 QQAMQKNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFE 115
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: D7U1R3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0102g00560 PE=4 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.976e-40
Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNESILH+AFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+E            ELYGRVLTVNYALPE+IKGGEQGWAAQPI  D+    E
Sbjct:    3 QPVQKNTLYVGGLAEEVNESILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAAAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 110
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: I1J633_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.749e-40
Identity = 83/108 (76.85%), Postives = 88/108 (81.48%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEVNE ILHAAFIPFGDIKDVKTPLDQA+QKHRSFGFVTFLERE            ELYGRVLTVNYALPE+IKGGEQGWAAQP+  D+    E
Sbjct:   30 QGVQKNTLYVGGLAEEVNELILHAAFIPFGDIKDVKTPLDQASQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFE 137
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: B9REC1_RICCO (Glycine-rich RNA-binding protein, putative OS=Ricinus communis GN=RCOM_1620220 PE=4 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.509e-40
Identity = 83/108 (76.85%), Postives = 89/108 (82.41%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLA+EVNE+ILHAAFIPFGDIKDVKTPLDQATQKHR+FGFVTFLE+E            ELYGRVLTVNYALPEKIKGGEQGWAAQPI  D+    E
Sbjct:    7 QQVQKNTLYVGGLADEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRAFGFVTFLEKEDAAAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWKDADTWFE 114
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: B9HXI2_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_659197 PE=4 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.673e-39
Identity = 83/100 (83.00%), Postives = 84/100 (84.00%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQP 303
            AQQ VQKNT+YVGGLAEE NESILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVT LERE            ELYGRVLTVNYALPEKIKGGEQGWAAQP
Sbjct:    3 AQQQVQKNTLYVGGLAEEANESILHAAFIPFGDIKDVKTPLDQAKQKHRSFGFVTLLEREVAVAAMGNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQP 102
[Close]
BLAST of MDP0000588137 vs. ExPASy TrEMBL
Match: F2E9Z6_HORVD (Predicted protein (Fragment) OS=Hordeum vulgare var. distichum PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.084e-38
Identity = 79/108 (73.15%), Postives = 87/108 (80.56%), Query Frame = 1 
Query:   10 QAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            Q VQKNT+YVGGLAEEV+E ILHAAF+PFG++KDVKTPLDQATQKHRSFGFVTFLERE            EL+GRVLTVNYA PEKIKGGEQGWAAQP+  D+    E
Sbjct:   33 QPVQKNTLYVGGLAEEVDEKILHAAFVPFGEVKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGAELFGRVLTVNYAFPEKIKGGEQGWAAQPVWADADTWFE 140
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT1G13690.1 (| Symbols: ATE1 | ATPase E1 | chr1:4693380-4694179 FORWARD LENGTH=177)

HSP 1 Score: 169.859 bits (429), Expect = 6.964e-43
Identity = 84/109 (77.06%), Postives = 89/109 (81.65%), Query Frame = 1 
Query:    7 QQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            QQA+QKNT+YVGGLA+EVNESILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAA P+  D+    E
Sbjct:    7 QQAMQKNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFE 115
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT5G61030.1 (| Symbols: GR-RBP3 | glycine-rich RNA-binding protein 3 | chr5:24560870-24562152 FORWARD LENGTH=309)

HSP 1 Score: 62.7734 bits (151), Expect = 1.199e-10
Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQG 288
            A + +  + +++GG+A  ++E  L  AF  +G++ D +  LD+ T + R FGFVTF   E            +L+GRV+ VNYA      GG  G
Sbjct:   33 AIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRTSGGGFGG 127
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT4G39260.3 (| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circadian rhythm, and RNA binding 1 | chr4:18274166-18274958 REVERSE LENGTH=92)

HSP 1 Score: 56.225 bits (134), Expect = 1.122e-8
Identity = 34/86 (39.53%), Postives = 43/86 (50.00%), Query Frame = 1 
Query:   34 YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGW 291
            +VGGLA   N+  L   F  FGD+ D K   D+ + + R FGFVTF + +            EL GRV+TVN A      GG  GW
Sbjct:    9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSGGG--GW 92
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT5G04280.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain | chr5:1192461-1195413 FORWARD LENGTH=310)

HSP 1 Score: 55.4546 bits (132), Expect = 1.914e-8
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 1 
Query:   13 AVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPE 264
            A + + ++VGGL+ EV +  L  AF  FGDI D +  L++ T + R FGF+TF +R             +   RV++VN A P+
Sbjct:    3 AKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMDESIREMHGRDFGDRVISVNRAEPK 86
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT4G39260.2 (| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circadian rhythm, and RNA binding 1 | chr4:18274166-18274958 REVERSE LENGTH=126)

HSP 1 Score: 55.4546 bits (132), Expect = 1.914e-8
Identity = 33/85 (38.82%), Postives = 42/85 (49.41%), Query Frame = 1 
Query:   34 YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQG 288
            +VGGLA   N+  L   F  FGD+ D K   D+ + + R FGFVTF + +            EL GRV+TVN A      GG  G
Sbjct:    9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSGGGGGG 93
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT4G39260.1 (| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, circadian rhythm, and RNA binding 1 | chr4:18274166-18274958 REVERSE LENGTH=169)

HSP 1 Score: 55.4546 bits (132), Expect = 1.914e-8
Identity = 33/85 (38.82%), Postives = 42/85 (49.41%), Query Frame = 1 
Query:   34 YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQG 288
            +VGGLA   N+  L   F  FGD+ D K   D+ + + R FGFVTF + +            EL GRV+TVN A      GG  G
Sbjct:    9 FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGSGGGGGG 93
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT3G08000.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2555034-2555829 REVERSE LENGTH=143)

HSP 1 Score: 54.6842 bits (130), Expect = 3.265e-8
Identity = 29/92 (31.52%), Postives = 49/92 (53.26%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            +  A   + +++GGL+  V+E  L  AF  FG++ +V+   D+ + + R FGFV F E               L GR L +++AL E+++GG
Sbjct:   34 SSSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRISFAL-ERVRGG 124
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT2G18510.1 (| Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:8031554-8033517 REVERSE LENGTH=363)

HSP 1 Score: 53.1434 bits (126), Expect = 9.500e-8
Identity = 26/92 (28.26%), Postives = 49/92 (53.26%), Query Frame = 1 
Query:    1 MAQQAVQKN---TMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEK 267
            + Q + ++N   T+YVGGL  +++E +L   F+  G + +V  P D+ T  H+++GF+ +   E            +L+G+ + VN A  +K
Sbjct:   14 LGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDK 105
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT2G21660.2 (| Symbols: ATGRP7, CCR2 | cold, circadian rhythm, and rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=159)

HSP 1 Score: 52.373 bits (124), Expect = 1.620e-7
Identity = 30/82 (36.59%), Postives = 41/82 (50.00%), Query Frame = 1 
Query:   34 YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            +VGGLA   ++  L  AF  +GD+ D K   D+ T + R FGFVTF + +            +L GR +TVN A      GG
Sbjct:   11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSRGSGGG 92
[Close]
BLAST of MDP0000588137 vs. TAIR10
Match: AT2G21660.1 (| Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold, circadian rhythm, and rna binding 2 | chr2:9265477-9266316 REVERSE LENGTH=176)

HSP 1 Score: 52.373 bits (124), Expect = 1.620e-7
Identity = 30/82 (36.59%), Postives = 41/82 (50.00%), Query Frame = 1 
Query:   34 YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            +VGGLA   ++  L  AF  +GD+ D K   D+ T + R FGFVTF + +            +L GR +TVN A      GG
Sbjct:   11 FVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQSRGSGGG 92
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0008s09710.1 ()

HSP 1 Score: 173.711 bits (439), Expect = 5.459e-44
Identity = 87/110 (79.09%), Postives = 90/110 (81.82%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            AQQ VQKNT+YVGGLAEEVNE+ILHA FIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAAQPI  D+    E
Sbjct:    3 AQQQVQKNTLYVGGLAEEVNEAILHATFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAASAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFE 112
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0010s16450.1 ()

HSP 1 Score: 166.392 bits (420), Expect = 8.715e-42
Identity = 83/100 (83.00%), Postives = 84/100 (84.00%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQP 303
            AQQ VQKNT+YVGGLAEE NESILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVT LERE            ELYGRVLTVNYALPEKIKGGEQGWAAQP
Sbjct:    3 AQQQVQKNTLYVGGLAEEANESILHAAFIPFGDIKDVKTPLDQAKQKHRSFGFVTLLEREVAVAAMGNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQP 102
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0007s12570.1 ()

HSP 1 Score: 54.299 bits (129), Expect = 4.827e-8
Identity = 29/92 (31.52%), Postives = 46/92 (50.00%), Query Frame = 1 
Query:    1 MAQQAVQKN---TMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEK 267
            + Q + ++N   T YVG L  +V+E +L   F+  G + +V  P D+ T  H+ +GFV F   E            +LYG+ + VN A  +K
Sbjct:   14 LGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK 105
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0012s05870.1 ()

HSP 1 Score: 52.7582 bits (125), Expect = 1.404e-7
Identity = 24/84 (28.57%), Postives = 47/84 (55.95%), Query Frame = 1 
Query:    4 AQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYA 255
            A + +  + ++VGG++ + +++ L  AF  +G++ + +  +D+ T + R FGFVT+   E            +L+GR + VNYA
Sbjct:   33 AMRCMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYA 116
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0002s26030.1 ()

HSP 1 Score: 52.7582 bits (125), Expect = 1.404e-7
Identity = 30/86 (34.88%), Postives = 42/86 (48.84%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQG 288
            ++VGGL   V E      F  +G + DV    DQ TQ+ R FGF+TF + E            EL G+++ V  ALP+    G +G
Sbjct:   94 IFVGGLPSTVTEDGFRQYFQSYGHVNDVVVMYDQQTQRPRGFGFITF-DSEDAVDNVLQKTFHELNGKLVEVKRALPKDANPGSEG 178
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0014s18470.1 ()

HSP 1 Score: 51.9878 bits (123), Expect = 2.395e-7
Identity = 36/107 (33.64%), Postives = 50/107 (46.73%), Query Frame = 1 
Query:   25 NTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSS-VTVESAD 342
            N ++VGGL   + E      F  +G + DV    DQ TQ+ R FGF+TF + E            EL G+++ V  ALP+    G +G      G  SS   V +AD
Sbjct:   96 NKIFVGGLPPTLMEDAFRQYFQSYGHVCDVVLMYDQQTQRPRGFGFITF-DTEDAVDNVLQKTFHELNGKLVEVKRALPKDANPGGEGRDGGYRGYGSSGANVSAAD 201
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0006s01680.1 ()

HSP 1 Score: 51.2174 bits (121), Expect = 4.086e-7
Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            ++VGGLA  V ES     F  FG I DV    D  TQ+ R FGF+T+ + E            EL G+++ V  A+P+++  G
Sbjct:  108 IFVGGLASTVTESDFRKYFDQFGVITDVVVMYDHNTQRPRGFGFITY-DSEEAVDRVLHKTFHELNGKMVEVKRAVPKELSPG 189
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0002s22120.1 ()

HSP 1 Score: 50.8322 bits (120), Expect = 5.336e-7
Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            ++VGGLA  V ES     F  FG I DV    D  TQ+ R FGF+T+ + E            EL G+++ V  A+P+++  G
Sbjct:  109 IFVGGLASTVTESDFRKYFDQFGLITDVVVMYDHNTQRPRGFGFITY-DSEEAVDKVLMKTFHELNGKMVEVKRAVPKELSPG 190
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0009s11920.1 ()

HSP 1 Score: 50.8322 bits (120), Expect = 5.336e-7
Identity = 31/85 (36.47%), Postives = 41/85 (48.24%), Query Frame = 1 
Query:   34 YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQG 288
            +VGGLA    + +L  AF  +G+I D K   D+ T + R FGFVTF   +            +L GR +TVN A      GG  G
Sbjct:   10 FVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEAQSRGSGGGGGG 94
[Close]
BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Match: POPTR_0014s15970.1 ()

HSP 1 Score: 50.447 bits (119), Expect = 6.970e-7
Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            ++VGGLA  V E+     F  FG I DV    D  TQ+ R FGF+TF + E            EL G+++ V  A+P+++  G
Sbjct:  109 IFVGGLASTVTENDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITF-DSEEAVDKVLMRTFHELNGKMVEVKRAVPKELSPG 190
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa012381m ()

HSP 1 Score: 180.259 bits (456), Expect = 4.158e-46
Identity = 91/111 (81.98%), Postives = 93/111 (83.78%), Query Frame = 1 
Query:    1 MAQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIGIDSSVTVE 333
            MAQQAVQKNT+YVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLERE            ELYGRVLTVNYALPEKIKGGEQGWAAQPI  D+    E
Sbjct:    1 MAQQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASSAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFE 111
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa009799m ()

HSP 1 Score: 55.4546 bits (132), Expect = 1.545e-8
Identity = 29/84 (34.52%), Postives = 47/84 (55.95%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGE 282
            ++VGGL+ +V E  L +AF  FG + + +  +++ T + R FGF+TF +R             EL  R+++VN A P+   GGE
Sbjct:    9 IFVGGLSWDVTERQLESAFQRFGKVHEAQIMMERDTNRPRGFGFITFGDRRAMEDAIREMHGRELGDRIISVNKAQPKMGGGGE 92
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa010113m ()

HSP 1 Score: 54.6842 bits (130), Expect = 2.635e-8
Identity = 25/81 (30.86%), Postives = 44/81 (54.32%), Query Frame = 1 
Query:   13 AVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYA 255
            ++  + +++GG++ + +E  L  AF  +G++ D +   D+ T + R FGF+TF   E            EL+GR + VNYA
Sbjct:   39 SMASSKLFIGGISYQTDEQSLREAFAKYGEVIDARIISDRETGRSRGFGFITFTSSEEASSAIQALDGQELHGRRVRVNYA 119
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa007508m ()

HSP 1 Score: 54.299 bits (129), Expect = 3.441e-8
Identity = 29/92 (31.52%), Postives = 46/92 (50.00%), Query Frame = 1 
Query:    1 MAQQAVQKN---TMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEK 267
            + Q + ++N   T YVG L  +V+E +L   F+  G + +V  P D+ T  H+ +GFV F   E            +LYG+ + VN A  +K
Sbjct:   14 LGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK 105
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa005132m ()

HSP 1 Score: 52.373 bits (124), Expect = 1.308e-7
Identity = 33/93 (35.48%), Postives = 47/93 (50.54%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQPIG 309
            ++VGGLA  V ES     F  FG I DV    D  TQ+ R FGF+T+ + E            EL G+++ V  A+P+++  G    +  PIG
Sbjct:  108 IFVGGLASTVTESDFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITY-DSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGP---SRSPIG 196
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa005119m ()

HSP 1 Score: 51.6026 bits (122), Expect = 2.231e-7
Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            ++VGGLA  V ES     F  FG I DV    D  TQ+ R FGF+T+ + E            EL G+++ V  A+P+++  G
Sbjct:  108 IFVGGLASTVTESDFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITY-DSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPG 189
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa005122m ()

HSP 1 Score: 51.2174 bits (121), Expect = 2.913e-7
Identity = 29/83 (34.94%), Postives = 43/83 (51.81%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            ++VGGLA  V ES     F  FG + DV    D  TQ+ R FGF+T+ + E            EL G+++ V  A+P+++  G
Sbjct:  107 IFVGGLASTVTESDFKKYFDQFGTVTDVVVMYDHNTQRPRGFGFITY-DSEEAVDRVLHKTFHELNGKMVEVKRAVPKELSPG 188
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa004834m ()

HSP 1 Score: 51.2174 bits (121), Expect = 2.913e-7
Identity = 29/83 (34.94%), Postives = 43/83 (51.81%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGG 279
            ++VGGLA  V ES     F  FG + DV    D  TQ+ R FGF+T+ + E            EL G+++ V  A+P+++  G
Sbjct:  107 IFVGGLASTVTESDFKKYFDQFGTVTDVVVMYDHNTQRPRGFGFITY-DSEEAVDRVLHKTFHELNGKMVEVKRAVPKELSPG 188
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa026345m ()

HSP 1 Score: 50.8322 bits (120), Expect = 3.805e-7
Identity = 28/91 (30.77%), Postives = 44/91 (48.35%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYALPEKIKGGEQGWAAQP 303
            ++VGGL+   N+  L  AF  +G + + +   D+ + + + FGFVTF   +             L GRV+ V+YA P+   GG    A  P
Sbjct:   35 LFVGGLSFYTNDKGLSEAFSQYGQVIEAQIVTDRVSDRSKGFGFVTFASEDEAHKALEEMNGKALNGRVIFVDYAKPKANYGGGMPIARGP 125
[Close]
BLAST of MDP0000588137 vs. GDR
Match: ppa013208m ()

HSP 1 Score: 49.6766 bits (117), Expect = 8.477e-7
Identity = 29/90 (32.22%), Postives = 43/90 (47.78%), Query Frame = 1 
Query:   31 MYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREXXXXXXXXXXXXELYGRVLTVNYAL----PEKIKGGEQG 288
            +++GGL+   ++  L  AF  FGD+ + +  +D+ T K R FGFV F   E            EL+GR + V+ A     P    GG  G
Sbjct:   37 LFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERTGPRPYNGGGGG 126
The following BLAST results are available for this feature:
BLAST of MDP0000588137 vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs NCBI nr)
Total hits: 25
Match NameE-valueIdentityDescription
gi|224101457|ref|XP_002312289.1|9.209e-4279.09predicted protein [Populus trichocarpa] >gi|222852... [more]
gi|388514621|gb|AFK45372.1|1.203e-4180.56unknown [Medicago truncatula][more]
gi|357487649|ref|XP_003614112.1|1.203e-4180.56Peptidyl-prolyl cis-trans isomerase E [Medicago tr... [more]
gi|356499919|ref|XP_003518783.1|3.499e-4178.70PREDICTED: peptidyl-prolyl cis-trans isomerase E-l... [more]
gi|297844272|ref|XP_002890017.1|1.330e-4077.06hypothetical protein ARALYDRAFT_471529 [Arabidopsi... [more]
gi|30683419|ref|NP_563931.2|1.330e-4077.06ATPase E1 [Arabidopsis thaliana] >gi|110736770|dbj... [more]
gi|225433902|ref|XP_002265598.1|1.737e-4077.78PREDICTED: peptidyl-prolyl cis-trans isomerase E [... [more]
gi|356498016|ref|XP_003517851.1|5.053e-4076.85PREDICTED: peptidyl-prolyl cis-trans isomerase E-l... [more]
gi|255541992|ref|XP_002512060.1|6.600e-4076.85glycine-rich RNA-binding protein, putative [Ricinu... [more]
gi|224108872|ref|XP_002314998.1|1.470e-3983.00predicted protein [Populus trichocarpa] >gi|222864... [more]

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BLAST of MDP0000588137 vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Vitis vinifera)
Total hits: 10
Match NameE-valueIdentityDescription
GSVIVT010107780016.411e-4377.78assembled CDS[more]
GSVIVT010107850014.954e-1176.32assembled CDS[more]
GSVIVT010078650011.033e-829.47assembled CDS[more]
GSVIVT010189910013.925e-831.52assembled CDS[more]
GSVIVT010300400011.142e-737.35assembled CDS[more]
GSVIVT010304900011.492e-736.14assembled CDS[more]
GSVIVT010338970011.948e-731.87assembled CDS[more]
GSVIVT010336660014.340e-732.93assembled CDS[more]
GSVIVT010377710015.668e-736.14assembled CDS[more]
GSVIVT010283940019.669e-730.56assembled CDS[more]
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BLAST of MDP0000588137 vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt Swiss-Prot)
Total hits: 14
Match NameE-valueIdentityDescription
PPIE_PONAB7.708e-1951.69Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
PPIE_MOUSE7.708e-1951.69Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPIE_HUMAN7.708e-1951.69Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
PPIE_BOVIN7.708e-1951.69Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPIE_DROME5.170e-1545.24Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPIE_RHIO95.008e-1041.98Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
SF3B4_CAEEL1.233e-839.24Splicing factor 3B subunit 4 OS=Caenorhabditis ele... [more]
SF3B4_RAT4.687e-836.71Splicing factor 3B subunit 4 OS=Rattus norvegicus ... [more]
SF3B4_MOUSE4.687e-836.71Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf... [more]
SF3B4_HUMAN4.687e-836.71Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF... [more]

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BLAST of MDP0000588137 vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9HIG1_POPTR1.048e-4179.09Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B7FJM0_MEDTR1.368e-4180.56Peptidyl-prolyl cis-trans isomerase E OS=Medicago ... [more]
I1JEH5_SOYBN3.981e-4178.70Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
Q0WRA3_ARATH1.513e-4077.06ATPase E1 OS=Arabidopsis thaliana GN=ATE1 PE=2 SV=... [more]
D7KQI8_ARALL1.513e-4077.06Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7U1R3_VITVI1.976e-4077.78Putative uncharacterized protein OS=Vitis vinifera... [more]
I1J633_SOYBN5.749e-4076.85Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9REC1_RICCO7.509e-4076.85Glycine-rich RNA-binding protein, putative OS=Rici... [more]
B9HXI2_POPTR1.673e-3983.00Predicted protein (Fragment) OS=Populus trichocarp... [more]
F2E9Z6_HORVD1.084e-3873.15Predicted protein (Fragment) OS=Hordeum vulgare va... [more]

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BLAST of MDP0000588137 vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs TAIR 10)
Total hits: 12
Match NameE-valueIdentityDescription
AT1G13690.16.964e-4377.06| Symbols: ATE1 | ATPase E1 | chr1:4693380-4694179... [more]
AT5G61030.11.199e-1033.68| Symbols: GR-RBP3 | glycine-rich RNA-binding prot... [more]
AT4G39260.31.122e-839.53| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, cir... [more]
AT5G04280.11.914e-835.71| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT4G39260.21.914e-838.82| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, cir... [more]
AT4G39260.11.914e-838.82| Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | cold, cir... [more]
AT3G08000.13.265e-831.52| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT2G18510.19.500e-828.26| Symbols: emb2444 | RNA-binding (RRM/RBD/RNP moti... [more]
AT2G21660.21.620e-736.59| Symbols: ATGRP7, CCR2 | cold, circadian rhythm, ... [more]
AT2G21660.11.620e-736.59| Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | cold, cir... [more]

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BLAST of MDP0000588137 vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Populus trichocarpa v2.0)
Total hits: 11
Match NameE-valueIdentityDescription
POPTR_0008s09710.15.459e-4479.09[more]
POPTR_0010s16450.18.715e-4283.00[more]
POPTR_0007s12570.14.827e-831.52[more]
POPTR_0012s05870.11.404e-728.57[more]
POPTR_0002s26030.11.404e-734.88[more]
POPTR_0014s18470.12.395e-733.64[more]
POPTR_0006s01680.14.086e-736.14[more]
POPTR_0002s22120.15.336e-736.14[more]
POPTR_0009s11920.15.336e-736.47[more]
POPTR_0014s15970.16.970e-736.14[more]

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BLAST of MDP0000588137 vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Prunus persica v1.0)
Total hits: 10
Match NameE-valueIdentityDescription
ppa012381m4.158e-4681.98[more]
ppa009799m1.545e-834.52[more]
ppa010113m2.635e-830.86[more]
ppa007508m3.441e-831.52[more]
ppa005132m1.308e-735.48[more]
ppa005119m2.231e-736.14[more]
ppa005122m2.913e-734.94[more]
ppa004834m2.913e-734.94[more]
ppa026345m3.805e-730.77[more]
ppa013208m8.477e-732.22[more]
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InterPro
Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 12..80
score: 1.1
IPR000504RNA recognition motif domainSMARTSM00360RNA recognition motifcoord: 10..83
score: 1
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 9..87
score: 17
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 7..89
score: 1.2
NoneNo IPR availablePANTHERPTHR24011FAMILY NOT NAMEDcoord: 10..90
score: 8.8
NoneNo IPR availablePANTHERPTHR24011:SF270 ATE1 (ATPASE E1); NUCLEIC ACID BINDINGcoord: 10..90
score: 8.8
NoneNo IPR availableSEGsegsegcoord: 62..73
score: NAcoord: 134..152
score
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 2..108
score: 2.7
NoneNo IPR availableSEGsegsegcoord: 33..47
score
NoneNo IPR availableSEGsegsegcoord: 37..48
score
NoneNo IPR availableSEGsegsegcoord: 12..21
score: NAcoord: 60..73
score
NoneNo IPR availableSEGsegsegcoord: 4..14
score
NoneNo IPR availableSEGsegsegcoord: 74..85
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>MDP0000588137 ID=MDP0000588137; Name=MDP0000588137; organism=Malus x domestica; type=mRNA; length=1746bp
ATGGCGCAGCAAGCAGTGCAGAAGAACACGATGTACGTCGGAGGACTGGC
GGAGGAGGTGAACGAGTCGATACTCCACGCGGCGTTCATACCCTTTGGGG
ACATCAAGGACGTAAAGACGCCGCTGGATCAAGCCACCCAGAAGCACCGC
TCTTTTGGGTTCGTCACGTTTTTGGAGAGGGAGGACGCCGCCGCTGCCAT
GGACAATATGGACGGCGCCGAGCTCTACGGCCGAGTCCTCACCGTCAATT
ACGCCCTACCTGAGAAAATCAAGGGCGGTGAACAGGGTTGGGCCGCCCAG
CCCAGTAAGTCCTCTTCCCCTTTACTCCTTATCTCTTACATTGTTGGTAC
TTGTGTGGGGATTTGACTGTTCGCTTGATTTGTTTAGTTGGGTTTGCTTG
ATTAATTAATTATCTGGGTTGCCTGGGATGTTTTGATCTTTGGGTTTTGG
TGTGTTTTGGGTTTAGGGTTTGTAATTGATTTTTTATTTTCTTTTGTATT
AATTTGCCATGTAGTGTTCCTCTTCGATTAGAAGTCAAAAGGTTTAGGTT
GGAATTTCGTGACGAATTCAATACCAAACTTCCTTTCTCTTTAATGTAAA
AAATATTGATATACTAAAAAAAAAAAAAAATTAGTCCTGTTATTAAGCGG
TTTGGAGTTTGTTTTGGAAGTTATTTTTAGAGAAAACTAATAAAAAAGTG
GTTTTTTGTTAAAATGAACAGTACCAAAGTTTTTCATTAAAATTCTCTAT
TTTTAAATGGTTGGAAGCCCGTTTGGTGAAAATATTTTTTGAATCAATTT
TCAGTAAAAATACAATTGAATTACGAAAAAAGCATATGCCTTTAAATGTT
GCATAGTACCTGTTTGGACCCAAATTTACATCATCGGCCCGTGTAATCGA
GACCGTAGAGTAAACATAGTTCTCAGCCGTCGGATGGAAAAGTGAAAATA
TTTTTGTTAAAAGATAATATTATGGTTTTTATCATGATTATCTTTTAATT
TGAATTATCTTGACATATTCTTAAACGGGATGGATATGATGCAAATTATA
TCCTCAAGTAAGAGTGTTTGGGCTCAAATTAACATGTTGGGCCGAGTATA
GAACCACTCTCGGCCCGGGAGGCCTGGCGACAGGGGAGCCTTGGATCATT
TAGTACGTGGGCTCCTAAACCTAGGTCGGCTAGGTCATATTACATTTACT
AGTCGAGTCCTAACGCGATAAGKAGTCTCGGCAAGGGTAATAACCCGGAA
GTGAATCCGGCTCAATAGAGGACTAGGCTCACAATCCTAGTAAACATAGG
ACTGGTCGAGTGGGTGTTTGATCCGGAGAAGAAGACCTAGTTCGAGTAGG
GTTTTGACTCGACTTCAAAGGTATCTAGTGCTATAAATAGAGGAGGCTGT
GCATCATTCAAGGGAACCTCCAACACACACAAAACTGCCCTGCGCAAACT
CTCACAACTTGAGATCTTTTTCTTTTCCTTTTTCGCTGACACATATTCCG
TTGGCATCAACAGCACTGTGAAGGCAACCGGTGATATCTTAAGTCGGCAT
AGATAGCTCTGTCACCGTAGAATCAGCCGATCTCGCAGCATCTTCCGTTG
GCATCAACAGCACTACGGCGAGGACGACTGGTTACCTATCCAAGTCTCGG
TCGAGAAGGATTTCCGAATCCTYATTGGTCGAGGTCATCTCATCAGCCTT
CTCGGCGAAGTGRGGTGTTACCAGGTTAYTGTATTCGGCACRTTGA
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protein sequence of MDP0000588137

>MDP0000588137 ID=MDP0000588137; Name=MDP0000588137; organism=Malus x domestica; type=polypeptide; length=169bp
MAQQAVQKNTMYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHR
SFGFVTFLEREDAAAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQ
PIGIDSSVTVESADLAASSVGINSTTARTTGYLSKSRSRRISESXLVEVI
SSAFSAKXGVTRLXYSAX*
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mRNA from alignment at chr16:2386968..2388713-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000588137 ID=MDP0000588137; Name=MDP0000588137; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr16:2386968..2388713- (Malus x domestica
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mRNA from alignment at MDC009541.237:532..2277-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000588137 ID=MDP0000588137; Name=MDP0000588137; organism=Malus x domestica; type=mRNA; length=1746bp; location=Sequence derived from: MDC009541.237:532..2277- (Malus x domestica
ATGGCGCAGCAAGCAGTGCAGAAGAACACGATGTACGTCGGAGGACTGGC
GGAGGAGGTGAACGAGTCGATACTCCACGCGGCGTTCATACCCTTTGGGG
ACATCAAGGACGTAAAGACGCCGCTGGATCAAGCCACCCAGAAGCACCGC
TCTTTTGGGTTCGTCACGTTTTTGGAGAGGGAGGACGCCGCCGCTGCCAT
GGACAATATGGACGGCGCCGAGCTCTACGGCCGAGTCCTCACCGTCAATT
ACGCCCTACCTGAGAAAATCAAGGGCGGTGAACAGGGTTGGGCCGCCCAG
CCCAGTAAGTCCTCTTCCCCTTTACTCCTTATCTCTTACATTGTTGGTAC
TTGTGTGGGGATTTGACTGTTCGCTTGATTTGTTTAGTTGGGTTTGCTTG
ATTAATTAATTATCTGGGTTGCCTGGGATGTTTTGATCTTTGGGTTTTGG
TGTGTTTTGGGTTTAGGGTTTGTAATTGATTTTTTATTTTCTTTTGTATT
AATTTGCCATGTAGTGTTCCTCTTCGATTAGAAGTCAAAAGGTTTAGGTT
GGAATTTCGTGACGAATTCAATACCAAACTTCCTTTCTCTTTAATGTAAA
AAATATTGATATACTAAAAAAAAAAAAAAATTAGTCCTGTTATTAAGCGG
TTTGGAGTTTGTTTTGGAAGTTATTTTTAGAGAAAACTAATAAAAAAGTG
GTTTTTTGTTAAAATGAACAGTACCAAAGTTTTTCATTAAAATTCTCTAT
TTTTAAATGGTTGGAAGCCCGTTTGGTGAAAATATTTTTTGAATCAATTT
TCAGTAAAAATACAATTGAATTACGAAAAAAGCATATGCCTTTAAATGTT
GCATAGTACCTGTTTGGACCCAAATTTACATCATCGGCCCGTGTAATCGA
GACCGTAGAGTAAACATAGTTCTCAGCCGTCGGATGGAAAAGTGAAAATA
TTTTTGTTAAAAGATAATATTATGGTTTTTATCATGATTATCTTTTAATT
TGAATTATCTTGACATATTCTTAAACGGGATGGATATGATGCAAATTATA
TCCTCAAGTAAGAGTGTTTGGGCTCAAATTAACATGTTGGGCCGAGTATA
GAACCACTCTCGGCCCGGGAGGCCTGGCGACAGGGGAGCCTTGGATCATT
TAGTACGTGGGCTCCTAAACCTAGGTCGGCTAGGTCATATTACATTTACT
AGTCGAGTCCTAACGCGATAAGKAGTCTCGGCAAGGGTAATAACCCGGAA
GTGAATCCGGCTCAATAGAGGACTAGGCTCACAATCCTAGTAAACATAGG
ACTGGTCGAGTGGGTGTTTGATCCGGAGAAGAAGACCTAGTTCGAGTAGG
GTTTTGACTCGACTTCAAAGGTATCTAGTGCTATAAATAGAGGAGGCTGT
GCATCATTCAAGGGAACCTCCAACACACACAAAACTGCCCTGCGCAAACT
CTCACAACTTGAGATCTTTTTCTTTTCCTTTTTCGCTGACACATATTCCG
TTGGCATCAACAGCACTGTGAAGGCAACCGGTGATATCTTAAGTCGGCAT
AGATAGCTCTGTCACCGTAGAATCAGCCGATCTCGCAGCATCTTCCGTTG
GCATCAACAGCACTACGGCGAGGACGACTGGTTACCTATCCAAGTCTCGG
TCGAGAAGGATTTCCGAATCCTYATTGGTCGAGGTCATCTCATCAGCCTT
CTCGGCGAAGTGRGGTGTTACCAGGTTAYTGTATTCGGCACRTTGA
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Coding sequence (CDS) from alignment at MDC009541.237:532..2277-

>MDP0000588137 ID=MDP0000588137; Name=MDP0000588137; organism=Malus x domestica; type=CDS; length=507bp; location=Sequence derived from: MDC009541.237:532..2277- (Malus x domestica
ATGGCGCAGCAAGCAGTGCAGAAGAACACGATGTACGTCGGAGGACTGGC
GGAGGAGGTGAACGAGTCGATACTCCACGCGGCGTTCATACCCTTTGGGG
ACATCAAGGACGTAAAGACGCCGCTGGATCAAGCCACCCAGAAGCACCGC
TCTTTTGGGTTCGTCACGTTTTTGGAGAGGGAGGACGCCGCCGCTGCCAT
GGACAATATGGACGGCGCCGAGCTCTACGGCCGAGTCCTCACCGTCAATT
ACGCCCTACCTGAGAAAATCAAGGGCGGTGAACAGGGTTGGGCCGCCCAG
CCCATCGGCATAGATAGCTCTGTCACCGTAGAATCAGCCGATCTCGCAGC
ATCTTCCGTTGGCATCAACAGCACTACGGCGAGGACGACTGGTTACCTAT
CCAAGTCTCGGTCGAGAAGGATTTCCGAATCCTYATTGGTCGAGGTCATC
TCATCAGCCTTCTCGGCGAAGTGRGGTGTTACCAGGTTAYTGTATTCGGC
ACRTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding