MDP0000639167, MDP0000639167 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000639167
Unique Name	MDP0000639167
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	3499

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr2	chromosome	chr2:22529356..22532854 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC000600.439	contig	MDC000600.439:7352..10850 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23
KEGG/KAAS of Malus x domestica Whole Genome v1.0	2012-04-02

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000639167_exon_1	MDP0000639167_exon_1	Malus x domestica	CDS
MDP0000639167_exon_2	MDP0000639167_exon_2	Malus x domestica	CDS
MDP0000639167_exon_3	MDP0000639167_exon_3	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000639167	MDP0000639167	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 204..496 score: 1.3e
IPR006501	Pectinesterase inhibitor	GENE3D	1.20.140.40	no description	coord: 25..172 score: 1.4
IPR006501	Pectinesterase inhibitor	PFAM	PF04043	PMEI	coord: 26..169 score: 7.3
IPR006501	Pectinesterase inhibitor	SMART	SM00856	Plant invertase/pectin methylesterase inhibi	coord: 23..169 score: 6.7
IPR006501	Pectinesterase inhibitor	TIGRFAMs	TIGR01614	PME_inhib: pectinesterase inhibitor domain	coord: 14..172 score: 4.8
IPR006501	Pectinesterase inhibitor	SUPERFAMILY	101148	Plant invertase/pectin methylesterase inhibitor	coord: 25..176 score: 6.6
IPR006633	Carbohydrate-binding/sugar hydrolysis domain	SMART	SM00722	Domain present in carbohydrate binding prot	coord: 238..414 score: 0
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 197..511 score: 1.1e
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10	no description	coord: 199..504 score: 1.4e
IPR018040	Pectinesterase, active site	PROSITE	PS00503	PECTINESTERASE_2	coord: 347..356 score
IPR018040	Pectinesterase, active site	PROSITE	PS00800	PECTINESTERASE_1	coord: 230..249 score
None	No IPR available	PANTHER	PTHR22931	FAMILY NOT NAMED	coord: 87..460 score: 1.1
None	No IPR available	PANTHER	PTHR22931:SF5	METHYLESTERASE INHIBITOR-RELATED	coord: 87..460 score: 1.1
None	No IPR available	SEG	seg	seg	coord: 264..278 score: NAcoord: 524..539 score
None	No IPR available	SEG	seg	seg	coord: 46..58 score
None	No IPR available	SEG	seg	seg	coord: 10..21 score
None	No IPR available	SEG	seg	seg	coord: 32..43 score
None	No IPR available	SEG	seg	seg	coord: 5..24 score
None	No IPR available	SEG	seg	seg	coord: 17..50 score
None	No IPR available	SEG	seg	seg	coord: 42..55 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:22529356..22532854+
mRNA from alignment at MDC000600.439:7352..10850+
coding sequence from alignment at MDC000600.439:7352..10850+

mRNA sequence

>MDP0000639167 ID=MDP0000639167; Name=MDP0000639167; organism=Malus x domestica; type=mRNA; length=3499bp
ATGGCAATTCGATTTTACTCGACACTTTATTTGGTGATTTGTCTCTCTCC
ATTAATCATTTTTGGTTACTCTCCCAATGATGTGAAAACATGGTGTAGCC
AAACCCCTCACCCACACCCATGCGAGAGTTTTCTAAGCCATAACCCAAAT
AATATCCCCATCAAAGGTAAGTCCCAATTCTTCAAGATATCAACCCAACT
AGCCCTAGACCGTGCCATACTTGCTCACACCAACTTGTATTCACTTGGCT
CAAAGTGCCAAAATGCACATGAAAAAGCTGCATGGGCTGACTGCCTTGAG
CTTTATGACTACACAATCCAAAAGCTCAACAAATCCATAGATCCCGTCAC
CAATGGCGCTACTCAAAACGACGCTCAATCTTGGCTCAGCACAGCTCTCA
CGAACCTTGAGACATGTCTAGCAGGGTTTGTAGACCTCGCTGTCTCGAAT
AATCAGCTCATGCCATCTAATAATGTTTCTAATTTGATTAGCAACACTTT
GTCCATTAACAAAGTACCGTACACCTCTCAGCCAGAATATAAACAAGGCT
TTCCAACTTGGGTGAAGCCCGGGGATCGGAAGCTCTTGCAGTCGTCTTCT
CCTAAGGCAGATATTGTGGTGGCAAAAGACGGTTCAGGGAATTACAAGAC
CATAAATGAGGCAATATCTGCAGCTTCAAAGAGAAAAGGGAGCGGGAGGT
ATGTGATATATGTGAAGGCAGGGAGCTACAAGGAAAATGTTCAGATAAAG
TTGAATAATATCATGTTGTTGGGAGATGGCATAGGAAAGACAATCATTAC
AGGAAGCAAAAGTGTTGGCGGGGGTACTACAACCTTCAATTCAGCTACAG
TTGGTAAGTAAAATTAGCTTCAATTCTTTATTATGTTCTACGAAACATTT
TTTTGGCTTGATGATAAATTCAATGGGGTCACCGGTCACAAATAATAAGA
AAATTTGTATCTCATAATAAAAAAAGTGAACAAGTCACTTGTAATATATG
TAATTTACTAGTTTGTTTGAAAATAGATGTGAGAGAGTCAAAAAGAGAAG
TACGTAGTAAATTATTATAAGAATGATTAGATGGTAGTAGTAGTACTGGC
TAGGCAAAGCGTAAAGTTTGATAGTCATTAAGTTCATTGACTGGGAGGGT
AAGCTAATTTGTCGAGTTTTATTTCACTGGTGATAGACAATGATCATGTC
ATCTAGATACTTACAAGATTAACATTTTTCCTCCACTTGTCTTAACTATG
GACTACGATGACGATCAACTAGTTTGAACATGTTAGATTGTGGTACGAAA
CTGTTCTTTTCCGTTGTCTTCTTATATTGGCCAAAGAATATTTGCAAAGT
CAGCAATTACACACACGCAACTAAGCTATTTACAATACATAACAGTTTTG
ATTTTTTATTTTCTTCATTGTAGCTGTGGTCGGAGATGGGTTTATTGCCC
AAGGCATAACATTCGAAAACACTGCCGGTCTAACAAGTGGGCAAGCCGTG
GCACTCCGGTCCGGTTCAGATCTATCTGTGTTTTACAAGTGTAGCTTTGA
GGGGAACCAAGACACCCTCTATGTGCACTCTGAAAGGCAATTCTATAGAG
AATGTGACATCTATGGAACTGTTGACTTTATTTTTGGCAACGCTGCCGTG
GTTATTCAAAATAGTAACATTTATGTTCACAACCACAAAACCAACACAGT
TACAGCCCAGGGCCGAACCGACCCAAATCAGAACACAGGAATTTCCATTC
ATAATTGTAAGGTTACAGCTGCTTCGGACTTAAAACCGGTTCAAAGTTCA
GTTAAAACATACCTAGGGAGGCCGTGGAAGCAATATTCTCGAACGGTGTT
TATGAAGACATACCTTGATAGCTTAATTAACCCAGCAGGTTGGATGGAAT
GGAGTGGCGATTTTGCCTTGAAGACTTTGTATTATGGTGAATACATGAAC
ACTGGCCCTGGTGCATCCACTAAAAATAGGGTTAGTTGGGCAGGTTACCA
TGTGATTACTAGTGCCTCGGAGGCTTCCGAATTCAGTGTTGGGAACTTCA
TTGCTGGTGGTTCTTGGTTGCCAGCCACCAATGTGCCTTTCACCTCTGGT
CTATGATTATTAATAGATTTGTTTGTAACATAATAAATAAATTGGCTGTT
GCCCAAAAAAGTAGTGTTTCTTTATATGGAATTGTCAATGGCTCATGAAT
TGTCATTCTTTGTGAAATTGTTTATATGACTAATAATGGATAAGGTTCTT
ATATTTGTGTTTGTCTGATTTAGATACTATTGTTGATCATTTTGCTGTTT
CTGGTTTGGGAGGTTATTTAATGATTGTAATTTATGAATCTATATAAATA
TGTCTATCATATTATAAAAAATAAAAAATAAAAAAATTGACCACATATTT
TTTGTACTTAGTTATCAACATTGTCGATCCAGTATGATTGTATACTTATT
CATTTGTTTGATTAATTGCCAAAGCAAAAAATCCGACTTGTTTCATCGAG
ATATTGTACATCTTGGTCAATGATAAACTGTTCAAAGGTGGGGAATTATC
TTTTTTCTAAAATAAAAGTAGTAACTGAATCCTTTCTTAATCTTTCTTAA
TCTTCGACAAGAAAAAAAATTTCTTCAATCTTATCATACGAAACTGAAAA
ATCTAATTGAGAAATATTTACTAAAGAATTACTTTTTTGTTTATTATTGA
TCTGATTAACGTTGGAAAAAAAAATGCCTGTGAATACAGTAAAGTCCAAA
ATTTTCTCTGTTATTCAGCTATGTTTCGCACAAATGGTTAGGTTACCATG
TCATTTCTAGTGACTTGGAGGCTTCAAATTCCAGTGCTGGGAACACCATT
GCTGGTGATTCTTGGTTGCCAGCCAGTCAGCCACCAATGCCTTTCTCCTG
TGCTTTATAATTATCATCAGATTTCTTTTGTAACATAAATAAATATGTTG
TTGCCCAAAAAAATTGTGGAATTGATTAAGGACGTTTGTATGATTGGAAA
AATAGTGTTTCTTTATAGAATTCACTAGTAGAAAAAACCATTTGCGAGAT
AGAACTTTATGTGACGAAGGAGTTGACATTGCACAAGGGTGTTTCGCGCA
ATGAATTTAAGTCTCCATCGCGCAAGTTCATTGCACAAAAAGTAAAGTAC
CTAACATTTTTTTTTGGTAAAGGGAAAACTTCATAGAAAAGAAAGGCACA
AGGCCAAACAACAAGCAGAGAAAAGACTCCGCAACACCAGAGAAACAGAG
ACAACGATAAATAGGATCGAGAGAGAAGCCACCACACCAAGTACCAGTTT
TGCCCTATCTATCAGTGCACAGAAACCCCTATCTTACAAAAGAGGACATG
GGAGACCGTCTTTATTCAAAATGCCAACTAACGAAGATGGAGGTCGTACA
ACCCAGCCGAAGCCGCACATCTACGGTGAAATATTCCTCGCGAAAAAATC
CACCTCCATATTTGCTGATCGTGGAGTCCACGACCAGGAGCATGATTGA

protein sequence of MDP0000639167

>MDP0000639167 ID=MDP0000639167; Name=MDP0000639167; organism=Malus x domestica; type=polypeptide; length=613bp
MAIRFYSTLYLVICLSPLIIFGYSPNDVKTWCSQTPHPHPCESFLSHNPN
NIPIKGKSQFFKISTQLALDRAILAHTNLYSLGSKCQNAHEKAAWADCLE
LYDYTIQKLNKSIDPVTNGATQNDAQSWLSTALTNLETCLAGFVDLAVSN
NQLMPSNNVSNLISNTLSINKVPYTSQPEYKQGFPTWVKPGDRKLLQSSS
PKADIVVAKDGSGNYKTINEAISAASKRKGSGRYVIYVKAGSYKENVQIK
LNNIMLLGDGIGKTIITGSKSVGGGTTTFNSATVAVVGDGFIAQGITFEN
TAGLTSGQAVALRSGSDLSVFYKCSFEGNQDTLYVHSERQFYRECDIYGT
VDFIFGNAAVVIQNSNIYVHNHKTNTVTAQGRTDPNQNTGISIHNCKVTA
ASDLKPVQSSVKTYLGRPWKQYSRTVFMKTYLDSLINPAGWMEWSGDFAL
KTLYYGEYMNTGPGASTKNRVSWAGYHVITSASEASEFSVGNFIAGGSWL
PATNGKLHRKERHKAKQQAEKRLRNTRETETTINRIEREATTPSTSFALS
ISAQKPLSYKRGHGRPSLFKMPTNEDGGRTTQPKPHIYGEIFLAKKSTSI
FADRGVHDQEHD*

mRNA from alignment at chr2:22529356..22532854+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000639167 ID=MDP0000639167; Name=MDP0000639167; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr2:22529356..22532854+ (Malus x domestica

mRNA from alignment at MDC000600.439:7352..10850+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000639167 ID=MDP0000639167; Name=MDP0000639167; organism=Malus x domestica; type=mRNA; length=3499bp; location=Sequence derived from: MDC000600.439:7352..10850+ (Malus x domestica
ATGGCAATTCGATTTTACTCGACACTTTATTTGGTGATTTGTCTCTCTCC
ATTAATCATTTTTGGTTACTCTCCCAATGATGTGAAAACATGGTGTAGCC
AAACCCCTCACCCACACCCATGCGAGAGTTTTCTAAGCCATAACCCAAAT
AATATCCCCATCAAAGGTAAGTCCCAATTCTTCAAGATATCAACCCAACT
AGCCCTAGACCGTGCCATACTTGCTCACACCAACTTGTATTCACTTGGCT
CAAAGTGCCAAAATGCACATGAAAAAGCTGCATGGGCTGACTGCCTTGAG
CTTTATGACTACACAATCCAAAAGCTCAACAAATCCATAGATCCCGTCAC
CAATGGCGCTACTCAAAACGACGCTCAATCTTGGCTCAGCACAGCTCTCA
CGAACCTTGAGACATGTCTAGCAGGGTTTGTAGACCTCGCTGTCTCGAAT
AATCAGCTCATGCCATCTAATAATGTTTCTAATTTGATTAGCAACACTTT
GTCCATTAACAAAGTACCGTACACCTCTCAGCCAGAATATAAACAAGGCT
TTCCAACTTGGGTGAAGCCCGGGGATCGGAAGCTCTTGCAGTCGTCTTCT
CCTAAGGCAGATATTGTGGTGGCAAAAGACGGTTCAGGGAATTACAAGAC
CATAAATGAGGCAATATCTGCAGCTTCAAAGAGAAAAGGGAGCGGGAGGT
ATGTGATATATGTGAAGGCAGGGAGCTACAAGGAAAATGTTCAGATAAAG
TTGAATAATATCATGTTGTTGGGAGATGGCATAGGAAAGACAATCATTAC
AGGAAGCAAAAGTGTTGGCGGGGGTACTACAACCTTCAATTCAGCTACAG
TTGGTAAGTAAAATTAGCTTCAATTCTTTATTATGTTCTACGAAACATTT
TTTTGGCTTGATGATAAATTCAATGGGGTCACCGGTCACAAATAATAAGA
AAATTTGTATCTCATAATAAAAAAAGTGAACAAGTCACTTGTAATATATG
TAATTTACTAGTTTGTTTGAAAATAGATGTGAGAGAGTCAAAAAGAGAAG
TACGTAGTAAATTATTATAAGAATGATTAGATGGTAGTAGTAGTACTGGC
TAGGCAAAGCGTAAAGTTTGATAGTCATTAAGTTCATTGACTGGGAGGGT
AAGCTAATTTGTCGAGTTTTATTTCACTGGTGATAGACAATGATCATGTC
ATCTAGATACTTACAAGATTAACATTTTTCCTCCACTTGTCTTAACTATG
GACTACGATGACGATCAACTAGTTTGAACATGTTAGATTGTGGTACGAAA
CTGTTCTTTTCCGTTGTCTTCTTATATTGGCCAAAGAATATTTGCAAAGT
CAGCAATTACACACACGCAACTAAGCTATTTACAATACATAACAGTTTTG
ATTTTTTATTTTCTTCATTGTAGCTGTGGTCGGAGATGGGTTTATTGCCC
AAGGCATAACATTCGAAAACACTGCCGGTCTAACAAGTGGGCAAGCCGTG
GCACTCCGGTCCGGTTCAGATCTATCTGTGTTTTACAAGTGTAGCTTTGA
GGGGAACCAAGACACCCTCTATGTGCACTCTGAAAGGCAATTCTATAGAG
AATGTGACATCTATGGAACTGTTGACTTTATTTTTGGCAACGCTGCCGTG
GTTATTCAAAATAGTAACATTTATGTTCACAACCACAAAACCAACACAGT
TACAGCCCAGGGCCGAACCGACCCAAATCAGAACACAGGAATTTCCATTC
ATAATTGTAAGGTTACAGCTGCTTCGGACTTAAAACCGGTTCAAAGTTCA
GTTAAAACATACCTAGGGAGGCCGTGGAAGCAATATTCTCGAACGGTGTT
TATGAAGACATACCTTGATAGCTTAATTAACCCAGCAGGTTGGATGGAAT
GGAGTGGCGATTTTGCCTTGAAGACTTTGTATTATGGTGAATACATGAAC
ACTGGCCCTGGTGCATCCACTAAAAATAGGGTTAGTTGGGCAGGTTACCA
TGTGATTACTAGTGCCTCGGAGGCTTCCGAATTCAGTGTTGGGAACTTCA
TTGCTGGTGGTTCTTGGTTGCCAGCCACCAATGTGCCTTTCACCTCTGGT
CTATGATTATTAATAGATTTGTTTGTAACATAATAAATAAATTGGCTGTT
GCCCAAAAAAGTAGTGTTTCTTTATATGGAATTGTCAATGGCTCATGAAT
TGTCATTCTTTGTGAAATTGTTTATATGACTAATAATGGATAAGGTTCTT
ATATTTGTGTTTGTCTGATTTAGATACTATTGTTGATCATTTTGCTGTTT
CTGGTTTGGGAGGTTATTTAATGATTGTAATTTATGAATCTATATAAATA
TGTCTATCATATTATAAAAAATAAAAAATAAAAAAATTGACCACATATTT
TTTGTACTTAGTTATCAACATTGTCGATCCAGTATGATTGTATACTTATT
CATTTGTTTGATTAATTGCCAAAGCAAAAAATCCGACTTGTTTCATCGAG
ATATTGTACATCTTGGTCAATGATAAACTGTTCAAAGGTGGGGAATTATC
TTTTTTCTAAAATAAAAGTAGTAACTGAATCCTTTCTTAATCTTTCTTAA
TCTTCGACAAGAAAAAAAATTTCTTCAATCTTATCATACGAAACTGAAAA
ATCTAATTGAGAAATATTTACTAAAGAATTACTTTTTTGTTTATTATTGA
TCTGATTAACGTTGGAAAAAAAAATGCCTGTGAATACAGTAAAGTCCAAA
ATTTTCTCTGTTATTCAGCTATGTTTCGCACAAATGGTTAGGTTACCATG
TCATTTCTAGTGACTTGGAGGCTTCAAATTCCAGTGCTGGGAACACCATT
GCTGGTGATTCTTGGTTGCCAGCCAGTCAGCCACCAATGCCTTTCTCCTG
TGCTTTATAATTATCATCAGATTTCTTTTGTAACATAAATAAATATGTTG
TTGCCCAAAAAAATTGTGGAATTGATTAAGGACGTTTGTATGATTGGAAA
AATAGTGTTTCTTTATAGAATTCACTAGTAGAAAAAACCATTTGCGAGAT
AGAACTTTATGTGACGAAGGAGTTGACATTGCACAAGGGTGTTTCGCGCA
ATGAATTTAAGTCTCCATCGCGCAAGTTCATTGCACAAAAAGTAAAGTAC
CTAACATTTTTTTTTGGTAAAGGGAAAACTTCATAGAAAAGAAAGGCACA
AGGCCAAACAACAAGCAGAGAAAAGACTCCGCAACACCAGAGAAACAGAG
ACAACGATAAATAGGATCGAGAGAGAAGCCACCACACCAAGTACCAGTTT
TGCCCTATCTATCAGTGCACAGAAACCCCTATCTTACAAAAGAGGACATG
GGAGACCGTCTTTATTCAAAATGCCAACTAACGAAGATGGAGGTCGTACA
ACCCAGCCGAAGCCGCACATCTACGGTGAAATATTCCTCGCGAAAAAATC
CACCTCCATATTTGCTGATCGTGGAGTCCACGACCAGGAGCATGATTGA

Coding sequence (CDS) from alignment at MDC000600.439:7352..10850+

>MDP0000639167 ID=MDP0000639167; Name=MDP0000639167; organism=Malus x domestica; type=CDS; length=1839bp; location=Sequence derived from: MDC000600.439:7352..10850+ (Malus x domestica
ATGGCAATTCGATTTTACTCGACACTTTATTTGGTGATTTGTCTCTCTCC
ATTAATCATTTTTGGTTACTCTCCCAATGATGTGAAAACATGGTGTAGCC
AAACCCCTCACCCACACCCATGCGAGAGTTTTCTAAGCCATAACCCAAAT
AATATCCCCATCAAAGGTAAGTCCCAATTCTTCAAGATATCAACCCAACT
AGCCCTAGACCGTGCCATACTTGCTCACACCAACTTGTATTCACTTGGCT
CAAAGTGCCAAAATGCACATGAAAAAGCTGCATGGGCTGACTGCCTTGAG
CTTTATGACTACACAATCCAAAAGCTCAACAAATCCATAGATCCCGTCAC
CAATGGCGCTACTCAAAACGACGCTCAATCTTGGCTCAGCACAGCTCTCA
CGAACCTTGAGACATGTCTAGCAGGGTTTGTAGACCTCGCTGTCTCGAAT
AATCAGCTCATGCCATCTAATAATGTTTCTAATTTGATTAGCAACACTTT
GTCCATTAACAAAGTACCGTACACCTCTCAGCCAGAATATAAACAAGGCT
TTCCAACTTGGGTGAAGCCCGGGGATCGGAAGCTCTTGCAGTCGTCTTCT
CCTAAGGCAGATATTGTGGTGGCAAAAGACGGTTCAGGGAATTACAAGAC
CATAAATGAGGCAATATCTGCAGCTTCAAAGAGAAAAGGGAGCGGGAGGT
ATGTGATATATGTGAAGGCAGGGAGCTACAAGGAAAATGTTCAGATAAAG
TTGAATAATATCATGTTGTTGGGAGATGGCATAGGAAAGACAATCATTAC
AGGAAGCAAAAGTGTTGGCGGGGGTACTACAACCTTCAATTCAGCTACAG
TTGCTGTGGTCGGAGATGGGTTTATTGCCCAAGGCATAACATTCGAAAAC
ACTGCCGGTCTAACAAGTGGGCAAGCCGTGGCACTCCGGTCCGGTTCAGA
TCTATCTGTGTTTTACAAGTGTAGCTTTGAGGGGAACCAAGACACCCTCT
ATGTGCACTCTGAAAGGCAATTCTATAGAGAATGTGACATCTATGGAACT
GTTGACTTTATTTTTGGCAACGCTGCCGTGGTTATTCAAAATAGTAACAT
TTATGTTCACAACCACAAAACCAACACAGTTACAGCCCAGGGCCGAACCG
ACCCAAATCAGAACACAGGAATTTCCATTCATAATTGTAAGGTTACAGCT
GCTTCGGACTTAAAACCGGTTCAAAGTTCAGTTAAAACATACCTAGGGAG
GCCGTGGAAGCAATATTCTCGAACGGTGTTTATGAAGACATACCTTGATA
GCTTAATTAACCCAGCAGGTTGGATGGAATGGAGTGGCGATTTTGCCTTG
AAGACTTTGTATTATGGTGAATACATGAACACTGGCCCTGGTGCATCCAC
TAAAAATAGGGTTAGTTGGGCAGGTTACCATGTGATTACTAGTGCCTCGG
AGGCTTCCGAATTCAGTGTTGGGAACTTCATTGCTGGTGGTTCTTGGTTG
CCAGCCACCAATGGAAAACTTCATAGAAAAGAAAGGCACAAGGCCAAACA
ACAAGCAGAGAAAAGACTCCGCAACACCAGAGAAACAGAGACAACGATAA
ATAGGATCGAGAGAGAAGCCACCACACCAAGTACCAGTTTTGCCCTATCT
ATCAGTGCACAGAAACCCCTATCTTACAAAAGAGGACATGGGAGACCGTC
TTTATTCAAAATGCCAACTAACGAAGATGGAGGTCGTACAACCCAGCCGA
AGCCGCACATCTACGGTGAAATATTCCTCGCGAAAAAATCCACCTCCATA
TTTGCTGATCGTGGAGTCCACGACCAGGAGCATGATTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000070	Pectinesterase_cat
IPR006501	Pectinesterase_inhib_dom
IPR006633	Carb-bd_sugar_hydrolysis-dom
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR018040	Pectinesterase_Tyr_AS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity
GO:0004857	enzyme inhibitor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification