MDP0000871411, MDP0000871411 (mRNA) Malus spp. (apple)

Transcript Overview
NameMDP0000871411
Unique NameMDP0000871411
TypemRNA
OrganismMalus x domestica (Apple)
Sequence length4359
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA2012-07-23
KEGG/KAAS of Malus x domestica Whole Genome v1.02012-04-02
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MDP0000871411_exon_12MDP0000871411_exon_12Malus x domesticaCDS
MDP0000871411_exon_11MDP0000871411_exon_11Malus x domesticaCDS
MDP0000871411_exon_10MDP0000871411_exon_10Malus x domesticaCDS
MDP0000871411_exon_9MDP0000871411_exon_9Malus x domesticaCDS
MDP0000871411_exon_8MDP0000871411_exon_8Malus x domesticaCDS
MDP0000871411_exon_7MDP0000871411_exon_7Malus x domesticaCDS
MDP0000871411_exon_6MDP0000871411_exon_6Malus x domesticaCDS
MDP0000871411_exon_5MDP0000871411_exon_5Malus x domesticaCDS
MDP0000871411_exon_4MDP0000871411_exon_4Malus x domesticaCDS
MDP0000871411_exon_3MDP0000871411_exon_3Malus x domesticaCDS
MDP0000871411_exon_2MDP0000871411_exon_2Malus x domesticaCDS
MDP0000871411_exon_1MDP0000871411_exon_1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MDP0000871411MDP0000871411Malus x domesticapolypeptide


InterPro
Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 48..114
score: 7e-12coord: 133..203
score: 5.5e-20coord: 254..320
score: 7
IPR000504RNA recognition motif domainSMARTSM00360RNA recognition motifcoord: 47..116
score: 1.2e-15coord: 132..205
score: 1.8e-24coord: 253..322
score: 2
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 46..120
score: 14.709coord: 131..209
score: 17.882coord: 252..326
score: 14
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 33..118
score: 1.9e-19coord: 130..209
score: 4.9e-28coord: 234..323
score: 1.3
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 1..402
score: 5.9e
NoneNo IPR availablePANTHERPTHR24012:SF210SUBFAMILY NOT NAMEDcoord: 1..402
score: 5.9e
NoneNo IPR availableSEGsegsegcoord: 213..224
score: NAcoord: 325..340
score: NAcoord: 382..390
score
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 45..216
score: 3.4e-41coord: 232..331
score: 1
NoneNo IPR availableSEGsegsegcoord: 30..51
score
NoneNo IPR availableSEGsegsegcoord: 4..19
score
NoneNo IPR availableSEGsegsegcoord: 9..24
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>MDP0000871411 ID=MDP0000871411; Name=MDP0000871411; organism=Malus x domestica; type=mRNA; length=4359bp
ATGGAACAGCAGAGGTTCAAGCAGCAAGCCATGATACAGCAGTCGCTTTA
CCAACACCCTGCCCTCGTAGCTGCCCCTCAGGTTCTTATTGTCCCTTTGT
CTCTCTCTCTCTGTGGTTTAATTCTGGTTTACATGTTTGTTCATTTTGCT
GGGTCAAAAGTTTGAGTTTTTTATTGTTGTTTGGATATGGGTTTTTGTGT
ATAGGTTGAAATTTGTGGGAGATGTTTGGCCAAGTGCTGGTTTATTTCCA
TTGGAAATATTTATTTATGGGATTTTTGTGTTTGGCTGATCTGTGTGTGG
CTTTGTTTTACAAGGATCCCAAAAGTTGGATTTTTCCAGAAATTTTTGTA
ATTTTTTTGGGGAATTCTGTTTGAATTATCTAAATTTATCTATTTATTCT
TGAAATTTTGTATCAACTGTATTCAAGTGATGGTGTATACATTTTAGGTA
ATTATTATCCATATAGGAACCTTAATAATGTACATATAATTTGCCAAACT
CTACTGTTTGGATACTTGTAGCTTGTTCTGCTTGTTATTATATCCTTGTT
TCTATTAATCTACTGTCCAACGAGGGCACGTAATGTTCCGCATAATGAAC
AGATGGAACGATATCAGTCTCGGTCAATGGCCGTGCAGTTCTAAGTATTA
GTGTTTGTTACTACTACCTCTAATGATTCTATGCGAGGCTTCCTATATAA
AACGGAAAATTGAAAAGGGAGAAACTCTATCGGTTCATGATAAGTTTATT
GAGATAGCTTGAAACTGATGGGGTACCTATTATATAACAGATTGGCCTCT
TTCTGTCAATTTTGTAATCATGTGCAAGATTGTCTCCATGCCTGTGGTCC
TTTATTTTGTTTCAACCATTTGTTTGCTTATGCATCTCTTTAAGTTTTTG
TGGGGAGTGTAAATTTATTACTTAGGTTTTTTTTTTCCTTTTCCTTTTGC
TTGTTTTTTTACATTCGTATTTTTGCAGATAGAGCCTATCTTGAGTGGAA
ATCTGCCTCCTGGGTTTGATTCAAGTACTTGCCGCAGTGTGTGAGTGTTG
TATAGATATTTTTTTCTTTTTCTATTTTTGTTTATTTTTCTTTACAACTA
GGTTTCTTTGTACTCACTGAAAATCGTTTGTTTTCTTGCCCGAAATGTTT
AGTTCTTATGTAAATGAATGCAATCTATTGTGCTAATAATAGTCTGCGCA
TGCATAGAACTCGGGCATGGTTGCCTTTCTGCTATACGTATATTTTATTA
TTTATGTTAAATATATTTATGATGGGTAATGAGTCATTGTATATTTGAAG
CATCTGCTAGGTAGATTACTTTTCTCAGTCATTTTTTATCAGATTGCACG
TTATAATGTTGTAATTCGTGAAAAAATGCAGTTATGTTGGAAATATTCAC
CCACAAGTTACTGAACCCCTTATGCAAGAAGTCTTTGCCAGTACTGGTCC
ACTTGAAGGATGCAAGCTCATAAGGAAGGATAAGGTGGGGTTTATTTTTG
CCTACTTTGTGTGTTTTTCTTTGGATGGGTAGGTTAGGACAGATGATAGA
TTCTTCTTAGTTCCACGAGAATCTTTCTGTTTTTAATATTTGATGATCAG
CTGTGGATTCATATGATTAAATTCTGTTGCTCAAAAATGTTGGTACATTA
GTGATCTAGTAAGACTTTTTACTTACGTGTTGTTTCCAATGTATTCTCAA
TGCAGTCATCCTATGGATTTGTTGACTACTTTGATCGTAGGTCAGCTGCT
CTTGCTATTGTGACTCTTAATGGCAGGCATCTGTAAGTAAAAATCCTTAT
AGAATTATGATAGGCTTTCGTTTTTTGGTGGTGTCCTTTGCTGAATGTGC
TGTTTATTCAGGTTTGGGCAGCCGATTAAAGTTAATTGGGCATATGCAAG
TAGTCAGAGAGAGGATACATCAGGTTTGTATATGCATCGGTTATTATGAA
GTGATGTGTATGCATTGATTATCATGGACTGATATGTTCAAAATTTTAAT
TTCTTATGCTTGTTATGTTGGTGTGCAGGTCACTTTAATATTTTTGTTGG
TGATCTTAGCCCTGAGGTTACTGATGCTACACTGTTTGCATGTTTTTCTG
GTTATTCTAGTTGTTCGTAAGCTCCACTTCCTTGTCTTTTAGTTTTTTAT
TCAACATTGATGTTTTCTGTTATTCTGCTGATGTCTTTTGATATATTGGG
TTACTTCTATTGGATAATTGAAGTACCTCTTATTTCAAACATACTCGGCT
GTTTAAATTAATTTGATCTGATTTCTATCAAAGAGATGCTAGAGTTATGT
GGGATCAGAAAACTGGGCGTTCAAGGGGCTTTGGGTTTGTTTCTTTCCGA
AATCAGCAGGTACCGAAATTGTTAAACATTTCCTTTTGCATCTTCCTTCT
CACTCCTTGTTTTCTGGTTGGGCTCATTGTATGATTGTGCCACTGGTTTT
ATTTGTTCAGGAGGCCCAAAGTGCAATTAATGACTTAAATGGTAAGACAG
TGTACATTCTTTTGATGGAAGTTTATTTGCTTGCATATGTTGTTTAAATT
TTGGTTAGTGTACCCATTAAGAAGTGCTATGATGACATAACTCTTAACTT
GGTATCTCAGGAAAGTGGCTTGGAAGTAGACAGATTCGGTGCAATTGGGC
CACAAAAGGTGCTACTTCCAATGATGACAAGCAGAGTTCTGATTCTAAAA
ATGTTGTAGAGCTGACGAATGGAACATCAGGTGAGCTGCTTCATTAGTGA
TGAAACAAGTTTTCATAGTTGCTTATGTAGCTGTGGAAGTAAAATTGTTT
GTGTTCTCCCTTGGATGTTACTATCCATAATTAATATGAGTGGTGTAGCT
CTTGTTATTTTTTGTTCTTGATAAGTGGGATGTGTAAGAAACTATCCTTT
TAGTTTTATGATGGCATATTTGCTGGGTGATAATTTGTCTGTAGATATTG
CAGCTTGAATCTGTTGTCTACTCTTTGTTTTTCCAAAATGCTTTTTTTCT
TATTGTACAAAACTATTTTGAATTGGAATCAGAAATCTGTGAGTAGTGAT
GATGTTAGATATGATGTTCACTTTCTAATTTTCTGCCACATTTGTGTTCC
CATAATGATGAGCTTACTGTTTGTGTCCCTTGCAGACGATGGTCAGGAGA
AGCCTAATGAAGATGCTCCAGAGAACAATCCTCAGTATACTACGGTTTAT
GTGGGCAATCTGGCTCCTGAGGCAAGGATTTCTTTTCTAACTCATGGACT
ATTAAACTGGTTGTGGATTGGCTATATCTTTTCTTTTCATACTGTAATCA
CCATATGTTCTTATGCAAATGAAGTCAATTTTAGACCAAAGTACAGTAGA
GGCTGAAATTTCTGACAACATAGGCAAATAAAGTGCTGAAGAACCAACTT
CTTCAGCAAACTAATGTCAGCTTATCACCTCAGTGTTAGTTTTGATTGTG
TTTTTCTATGTATACGTGGTGGACAGCTGGCCCTCTTTCAAAACTGCAAA
GATACCATTGTTATAAGATCATAGGTTAATTGCGTGTTAGTGACAGGATC
CACAGGCAAACGGCTCTGGTTAGCATGGAACTCCCAGTGGGCATAACAAA
TAATGTCTACATTTGTCCAAGTTGCACAATAAACAAAGAAAAATGTTCTA
AATATGAGTTACCATTAATCTGCAGGTTACTTCAGTTGACCTTCATCGTC
ATTTCCATGGCCTTGGTGCTGGAGTTATTGAAGATGTTCGGGTGCAGCGA
GATAAAGGTTTTGGGTTTGTGAGATACAGTACCCATTCTGAAGCAGCTGT
GGCCATCCAGTTGGGGAATGCTAGGTTTCTCTGTGGCAAACCAATTAAGG
TACACTCTTGACGGAGTTTACAATTCAGTTGAATTACCAACAATTGACAA
ATTTTTGGCAAATATATTAGATTTCAGATGATTGCTTCTTTTCTTAGTTT
ACGAGTGAGGCGTCGTGTGGAGCAGGCACATATGCTTGTTTTAAATGTTT
GTGATATGTATAGGTCCTAATGGTGTCGTCAAATGATCAATTGGTTTGAT
CTTCTAATGGTTTTCTGTTTGTGTTAACAGTGTTCATGGGGCAGCAAGCC
TACTCCACCAGGGACAAGCTCAACCCCCCTGCCGCCACCAGCTGCAGTTC
ACATGCCAGGCTTCTCAGCCGCTGACCTTGTGGCCTATGAAAGACAAATG
GCATTGAGCAAAATGGGTGGTGCGCAAGCCCTCATGCTTCCGCAGGGTCA
GCATGCTCTGAAGGCAGCCATGGGGATGGGTGGTGGAGCCAGTCAGGCCA
TATACGACGGTGGCTACCATAATGTAGCAACAACTCAGCAACTCATGTAC
TACCAGTAA
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protein sequence of MDP0000871411

>MDP0000871411 ID=MDP0000871411; Name=MDP0000871411; organism=Malus x domestica; type=polypeptide; length=413bp
MEQQRFKQQAMIQQSLYQHPALVAAPQIEPILSGNLPPGFDSSTCRSVYV
GNIHPQVTEPLMQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAI
VTLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDATLFAC
FSGYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWLGSR
QIRCNWATKGATSNDDKQSSDSKNVVELTNGTSDDGQEKPNEDAPENNPQ
YTTVYVGNLAPEVTSVDLHRHFHGLGAGVIEDVRVQRDKGFGFVRYSTHS
EAAVAIQLGNARFLCGKPIKCSWGSKPTPPGTSSTPLPPPAAVHMPGFSA
ADLVAYERQMALSKMGGAQALMLPQGQHALKAAMGMGGGASQAIYDGGYH
NVATTQQLMYYQ*
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mRNA from alignment at chr15:15886734..15891092+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000871411 ID=MDP0000871411; Name=MDP0000871411; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr15:15886734..15891092+ (Malus x domestica
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mRNA from alignment at MDC021133.289:9164..13522+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000871411 ID=MDP0000871411; Name=MDP0000871411; organism=Malus x domestica; type=mRNA; length=4359bp; location=Sequence derived from: MDC021133.289:9164..13522+ (Malus x domestica
ATGGAACAGCAGAGGTTCAAGCAGCAAGCCATGATACAGCAGTCGCTTTA
CCAACACCCTGCCCTCGTAGCTGCCCCTCAGGTTCTTATTGTCCCTTTGT
CTCTCTCTCTCTGTGGTTTAATTCTGGTTTACATGTTTGTTCATTTTGCT
GGGTCAAAAGTTTGAGTTTTTTATTGTTGTTTGGATATGGGTTTTTGTGT
ATAGGTTGAAATTTGTGGGAGATGTTTGGCCAAGTGCTGGTTTATTTCCA
TTGGAAATATTTATTTATGGGATTTTTGTGTTTGGCTGATCTGTGTGTGG
CTTTGTTTTACAAGGATCCCAAAAGTTGGATTTTTCCAGAAATTTTTGTA
ATTTTTTTGGGGAATTCTGTTTGAATTATCTAAATTTATCTATTTATTCT
TGAAATTTTGTATCAACTGTATTCAAGTGATGGTGTATACATTTTAGGTA
ATTATTATCCATATAGGAACCTTAATAATGTACATATAATTTGCCAAACT
CTACTGTTTGGATACTTGTAGCTTGTTCTGCTTGTTATTATATCCTTGTT
TCTATTAATCTACTGTCCAACGAGGGCACGTAATGTTCCGCATAATGAAC
AGATGGAACGATATCAGTCTCGGTCAATGGCCGTGCAGTTCTAAGTATTA
GTGTTTGTTACTACTACCTCTAATGATTCTATGCGAGGCTTCCTATATAA
AACGGAAAATTGAAAAGGGAGAAACTCTATCGGTTCATGATAAGTTTATT
GAGATAGCTTGAAACTGATGGGGTACCTATTATATAACAGATTGGCCTCT
TTCTGTCAATTTTGTAATCATGTGCAAGATTGTCTCCATGCCTGTGGTCC
TTTATTTTGTTTCAACCATTTGTTTGCTTATGCATCTCTTTAAGTTTTTG
TGGGGAGTGTAAATTTATTACTTAGGTTTTTTTTTTCCTTTTCCTTTTGC
TTGTTTTTTTACATTCGTATTTTTGCAGATAGAGCCTATCTTGAGTGGAA
ATCTGCCTCCTGGGTTTGATTCAAGTACTTGCCGCAGTGTGTGAGTGTTG
TATAGATATTTTTTTCTTTTTCTATTTTTGTTTATTTTTCTTTACAACTA
GGTTTCTTTGTACTCACTGAAAATCGTTTGTTTTCTTGCCCGAAATGTTT
AGTTCTTATGTAAATGAATGCAATCTATTGTGCTAATAATAGTCTGCGCA
TGCATAGAACTCGGGCATGGTTGCCTTTCTGCTATACGTATATTTTATTA
TTTATGTTAAATATATTTATGATGGGTAATGAGTCATTGTATATTTGAAG
CATCTGCTAGGTAGATTACTTTTCTCAGTCATTTTTTATCAGATTGCACG
TTATAATGTTGTAATTCGTGAAAAAATGCAGTTATGTTGGAAATATTCAC
CCACAAGTTACTGAACCCCTTATGCAAGAAGTCTTTGCCAGTACTGGTCC
ACTTGAAGGATGCAAGCTCATAAGGAAGGATAAGGTGGGGTTTATTTTTG
CCTACTTTGTGTGTTTTTCTTTGGATGGGTAGGTTAGGACAGATGATAGA
TTCTTCTTAGTTCCACGAGAATCTTTCTGTTTTTAATATTTGATGATCAG
CTGTGGATTCATATGATTAAATTCTGTTGCTCAAAAATGTTGGTACATTA
GTGATCTAGTAAGACTTTTTACTTACGTGTTGTTTCCAATGTATTCTCAA
TGCAGTCATCCTATGGATTTGTTGACTACTTTGATCGTAGGTCAGCTGCT
CTTGCTATTGTGACTCTTAATGGCAGGCATCTGTAAGTAAAAATCCTTAT
AGAATTATGATAGGCTTTCGTTTTTTGGTGGTGTCCTTTGCTGAATGTGC
TGTTTATTCAGGTTTGGGCAGCCGATTAAAGTTAATTGGGCATATGCAAG
TAGTCAGAGAGAGGATACATCAGGTTTGTATATGCATCGGTTATTATGAA
GTGATGTGTATGCATTGATTATCATGGACTGATATGTTCAAAATTTTAAT
TTCTTATGCTTGTTATGTTGGTGTGCAGGTCACTTTAATATTTTTGTTGG
TGATCTTAGCCCTGAGGTTACTGATGCTACACTGTTTGCATGTTTTTCTG
GTTATTCTAGTTGTTCGTAAGCTCCACTTCCTTGTCTTTTAGTTTTTTAT
TCAACATTGATGTTTTCTGTTATTCTGCTGATGTCTTTTGATATATTGGG
TTACTTCTATTGGATAATTGAAGTACCTCTTATTTCAAACATACTCGGCT
GTTTAAATTAATTTGATCTGATTTCTATCAAAGAGATGCTAGAGTTATGT
GGGATCAGAAAACTGGGCGTTCAAGGGGCTTTGGGTTTGTTTCTTTCCGA
AATCAGCAGGTACCGAAATTGTTAAACATTTCCTTTTGCATCTTCCTTCT
CACTCCTTGTTTTCTGGTTGGGCTCATTGTATGATTGTGCCACTGGTTTT
ATTTGTTCAGGAGGCCCAAAGTGCAATTAATGACTTAAATGGTAAGACAG
TGTACATTCTTTTGATGGAAGTTTATTTGCTTGCATATGTTGTTTAAATT
TTGGTTAGTGTACCCATTAAGAAGTGCTATGATGACATAACTCTTAACTT
GGTATCTCAGGAAAGTGGCTTGGAAGTAGACAGATTCGGTGCAATTGGGC
CACAAAAGGTGCTACTTCCAATGATGACAAGCAGAGTTCTGATTCTAAAA
ATGTTGTAGAGCTGACGAATGGAACATCAGGTGAGCTGCTTCATTAGTGA
TGAAACAAGTTTTCATAGTTGCTTATGTAGCTGTGGAAGTAAAATTGTTT
GTGTTCTCCCTTGGATGTTACTATCCATAATTAATATGAGTGGTGTAGCT
CTTGTTATTTTTTGTTCTTGATAAGTGGGATGTGTAAGAAACTATCCTTT
TAGTTTTATGATGGCATATTTGCTGGGTGATAATTTGTCTGTAGATATTG
CAGCTTGAATCTGTTGTCTACTCTTTGTTTTTCCAAAATGCTTTTTTTCT
TATTGTACAAAACTATTTTGAATTGGAATCAGAAATCTGTGAGTAGTGAT
GATGTTAGATATGATGTTCACTTTCTAATTTTCTGCCACATTTGTGTTCC
CATAATGATGAGCTTACTGTTTGTGTCCCTTGCAGACGATGGTCAGGAGA
AGCCTAATGAAGATGCTCCAGAGAACAATCCTCAGTATACTACGGTTTAT
GTGGGCAATCTGGCTCCTGAGGCAAGGATTTCTTTTCTAACTCATGGACT
ATTAAACTGGTTGTGGATTGGCTATATCTTTTCTTTTCATACTGTAATCA
CCATATGTTCTTATGCAAATGAAGTCAATTTTAGACCAAAGTACAGTAGA
GGCTGAAATTTCTGACAACATAGGCAAATAAAGTGCTGAAGAACCAACTT
CTTCAGCAAACTAATGTCAGCTTATCACCTCAGTGTTAGTTTTGATTGTG
TTTTTCTATGTATACGTGGTGGACAGCTGGCCCTCTTTCAAAACTGCAAA
GATACCATTGTTATAAGATCATAGGTTAATTGCGTGTTAGTGACAGGATC
CACAGGCAAACGGCTCTGGTTAGCATGGAACTCCCAGTGGGCATAACAAA
TAATGTCTACATTTGTCCAAGTTGCACAATAAACAAAGAAAAATGTTCTA
AATATGAGTTACCATTAATCTGCAGGTTACTTCAGTTGACCTTCATCGTC
ATTTCCATGGCCTTGGTGCTGGAGTTATTGAAGATGTTCGGGTGCAGCGA
GATAAAGGTTTTGGGTTTGTGAGATACAGTACCCATTCTGAAGCAGCTGT
GGCCATCCAGTTGGGGAATGCTAGGTTTCTCTGTGGCAAACCAATTAAGG
TACACTCTTGACGGAGTTTACAATTCAGTTGAATTACCAACAATTGACAA
ATTTTTGGCAAATATATTAGATTTCAGATGATTGCTTCTTTTCTTAGTTT
ACGAGTGAGGCGTCGTGTGGAGCAGGCACATATGCTTGTTTTAAATGTTT
GTGATATGTATAGGTCCTAATGGTGTCGTCAAATGATCAATTGGTTTGAT
CTTCTAATGGTTTTCTGTTTGTGTTAACAGTGTTCATGGGGCAGCAAGCC
TACTCCACCAGGGACAAGCTCAACCCCCCTGCCGCCACCAGCTGCAGTTC
ACATGCCAGGCTTCTCAGCCGCTGACCTTGTGGCCTATGAAAGACAAATG
GCATTGAGCAAAATGGGTGGTGCGCAAGCCCTCATGCTTCCGCAGGGTCA
GCATGCTCTGAAGGCAGCCATGGGGATGGGTGGTGGAGCCAGTCAGGCCA
TATACGACGGTGGCTACCATAATGTAGCAACAACTCAGCAACTCATGTAC
TACCAGTAA
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Coding sequence (CDS) from alignment at MDC021133.289:9164..13522+

>MDP0000871411 ID=MDP0000871411; Name=MDP0000871411; organism=Malus x domestica; type=CDS; length=1239bp; location=Sequence derived from: MDC021133.289:9164..13522+ (Malus x domestica
ATGGAACAGCAGAGGTTCAAGCAGCAAGCCATGATACAGCAGTCGCTTTA
CCAACACCCTGCCCTCGTAGCTGCCCCTCAGATAGAGCCTATCTTGAGTG
GAAATCTGCCTCCTGGGTTTGATTCAAGTACTTGCCGCAGTGTTTATGTT
GGAAATATTCACCCACAAGTTACTGAACCCCTTATGCAAGAAGTCTTTGC
CAGTACTGGTCCACTTGAAGGATGCAAGCTCATAAGGAAGGATAAGTCAT
CCTATGGATTTGTTGACTACTTTGATCGTAGGTCAGCTGCTCTTGCTATT
GTGACTCTTAATGGCAGGCATCTGTTTGGGCAGCCGATTAAAGTTAATTG
GGCATATGCAAGTAGTCAGAGAGAGGATACATCAGGTCACTTTAATATTT
TTGTTGGTGATCTTAGCCCTGAGGTTACTGATGCTACACTGTTTGCATGT
TTTTCTGGTTATTCTAGTTGTTCAGATGCTAGAGTTATGTGGGATCAGAA
AACTGGGCGTTCAAGGGGCTTTGGGTTTGTTTCTTTCCGAAATCAGCAGG
AGGCCCAAAGTGCAATTAATGACTTAAATGGAAAGTGGCTTGGAAGTAGA
CAGATTCGGTGCAATTGGGCCACAAAAGGTGCTACTTCCAATGATGACAA
GCAGAGTTCTGATTCTAAAAATGTTGTAGAGCTGACGAATGGAACATCAG
ACGATGGTCAGGAGAAGCCTAATGAAGATGCTCCAGAGAACAATCCTCAG
TATACTACGGTTTATGTGGGCAATCTGGCTCCTGAGGTTACTTCAGTTGA
CCTTCATCGTCATTTCCATGGCCTTGGTGCTGGAGTTATTGAAGATGTTC
GGGTGCAGCGAGATAAAGGTTTTGGGTTTGTGAGATACAGTACCCATTCT
GAAGCAGCTGTGGCCATCCAGTTGGGGAATGCTAGGTTTCTCTGTGGCAA
ACCAATTAAGTGTTCATGGGGCAGCAAGCCTACTCCACCAGGGACAAGCT
CAACCCCCCTGCCGCCACCAGCTGCAGTTCACATGCCAGGCTTCTCAGCC
GCTGACCTTGTGGCCTATGAAAGACAAATGGCATTGAGCAAAATGGGTGG
TGCGCAAGCCCTCATGCTTCCGCAGGGTCAGCATGCTCTGAAGGCAGCCA
TGGGGATGGGTGGTGGAGCCAGTCAGGCCATATACGACGGTGGCTACCAT
AATGTAGCAACAACTCAGCAACTCATGTACTACCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding