ppa011056m, ppa011056m (mRNA) Prunus persica

Transcript Overview


Name	ppa011056m
Unique Name	ppa011056m
Type	mRNA
Organism	Prunus persica (Peach)
Sequence length	887

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
scaffold_5	supercontig	scaffold_5:12945050..12945936 -	Prunus persica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Prunus persica Whole Genome v1.0 Assembly & Annotation	2012-01-16
InterProScan of Prunus persica Whole Genome v1.0	2012-07-23
BLASTx of Prunus persica v1.0 vs Vitis vinifera	2012-07-23
BLASTx of Prunus persica v1.0 vs UniProt TrEMBL	2012-07-23
BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot	2012-07-23
BLASTx of Prunus persica v1.0 vs TAIR 10	2012-07-23
BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0	2012-07-23
BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0	2012-07-23
BLASTx of Prunus persica v1.0 vs NCBI nr	2012-07-23

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ppa011056m.g	ppa011056m.g	Prunus persica	gene

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ppa011056m.three_prime_UTR.1	ppa011056m.three_prime_UTR.1	Prunus persica	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ppa011056m.CDS.1	ppa011056m.CDS.1	Prunus persica	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ppa011056m.five_prime_UTR.1	ppa011056m.five_prime_UTR.1	Prunus persica	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ppa011056m	ppa011056m	Prunus persica	polypeptide

Cross References

External references for this mRNA


Database	Accession
"Phytozome_pacid	17667020"

Homology

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01022306001 (assembled CDS)

HSP 1 Score: 85.8853 bits (211), Expect = 1.536e-17
Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 1

Query:  385 LEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRR 585
            L+  P+L + A    T++G  AECAICL+EFVEG+ IRVL +C HGFH  C+  WLSSHSSCP+CR+
Sbjct:   80 LQSLPKLTHDA----TVSGKFAECAICLAEFVEGDEIRVLPQCGHGFHVLCVDTWLSSHSSCPSCRQ 142

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01032684001 (assembled CDS)

HSP 1 Score: 73.1738 bits (178), Expect = 1.030e-13
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 1

Query:  451 ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            +C ICL EF +G+ +RVL +C HGFH  CI  WL SHSSCPTCR + L
Sbjct:  112 DCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCPTCRHSLL 159

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01015336001 (assembled CDS)

HSP 1 Score: 71.633 bits (174), Expect = 2.998e-13
Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 1

Query:  325 QTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            + QQ L +++ + +    + +E  P  F    +K +  G E  CA+CLS+F + E +R+L +CKH FH  C+ +WL  HSSCP CR
Sbjct:  122 ENQQGLTRSESRFSGIDKTVIESLP-FFRFCSLKGSKEGLE--CAVCLSKFEDIEILRLLPKCKHAFHIDCVDQWLEKHSSCPLCR 204

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01015682001 (assembled CDS)

HSP 1 Score: 71.2478 bits (173), Expect = 3.915e-13
Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 1

Query:  451 ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCLXXXXXXXXXXXTTDNS----SQRIPAPESG 672
            EC++CL+EF E E +R+L +C H FH  CI  WLSSH++CP CR   +           + +NS      R+  PE+G
Sbjct:   82 ECSVCLAEFEEDEAVRLLPKCNHAFHIPCIDTWLSSHTNCPMCRAGIVSSTAGAPSPEQSVENSGPLEEARVEIPENG 159

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01026703001 (assembled CDS)

HSP 1 Score: 70.0922 bits (170), Expect = 8.721e-13
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 1

Query:  451 ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            +C++CLSEF +GE +R+L +C H FH  CI  WL SHSSCP CR
Sbjct:  134 DCSVCLSEFEDGENLRLLPKCNHAFHLPCIDTWLKSHSSCPLCR 177

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01009098001 (assembled CDS)

HSP 1 Score: 70.0922 bits (170), Expect = 8.721e-13
Identity = 34/69 (49.28%), Postives = 45/69 (65.22%), Query Frame = 1

Query:  379 SCLEGAPELFYSAEMKATLAGAEA-ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            S +E  P   YSA +KA   G E  ECA+CL+EF + E +R+L +C H FH+ CI  WL+SH +CP CR
Sbjct:  107 SDIERFPTFVYSA-VKAHKIGKEGLECAVCLNEFEDDETLRLLPKCNHVFHSDCIDLWLASHVTCPVCR 174

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01016661001 (assembled CDS)

HSP 1 Score: 69.707 bits (169), Expect = 1.139e-12
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 1

Query:  451 ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            ECA+CLSE V GE  R+L +C HGFH  CI  W  SHS+CP CR
Sbjct:  121 ECAVCLSELVTGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR 164

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01028038001 (assembled CDS)

HSP 1 Score: 69.3218 bits (168), Expect = 1.488e-12
Identity = 36/69 (52.17%), Postives = 41/69 (59.42%), Query Frame = 1

Query:  376 VSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            VS L+  P   YS   KAT  G   ECA+CLSEF + E  RVL +C H FH  CI  W  SHS+CP CR
Sbjct:   87 VSILKSLPTFVYS---KAT-HGPILECAVCLSEFEDDEKGRVLPKCNHCFHNDCIDMWFHSHSNCPLCR 151

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01016564001 (assembled CDS)

HSP 1 Score: 69.3218 bits (168), Expect = 1.488e-12
Identity = 31/67 (46.27%), Postives = 39/67 (58.21%), Query Frame = 1

Query:  382 CLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            C+E      Y  +M+  L G +  C +CLSEF EGE +R L  C H FH  CI  WL+SH +CP CR
Sbjct:  185 CVEITTVRKYEKDME--LVGDDRMCVVCLSEFEEGEELRTLPHCMHSFHVPCIDMWLNSHMNCPLCR 249

HSP 2 Score: 69.3218 bits (168), Expect = 1.488e-12
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 1

Query:  448 AECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            A C +CL EF +GE IR+L +C H FH  CI  WL SHS+CP CR T +
Sbjct:  306 ATCVVCLCEFKDGEAIRILPKCLHSFHVPCIDMWLCSHSNCPLCRTTVI 354

HSP 3 Score: 67.781 bits (164), Expect = 4.328e-12
Identity = 40/109 (36.70%), Postives = 51/109 (46.79%), Query Frame = 1

Query:  352 QQKSNVAGVSCLEGAPELFYSAEMKATLAGAE-AECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCLXXXXXXXXXXXTTDNSSQRIPAPESGP 675
            Q  S+V   + L   P   Y   M+  LAG +   CA+CLSEF EGE +R L  C H FH  CI  WL SH++CP CR               ++   S    A  +GP
Sbjct:   61 QTPSSVDNSAALLMIPAHKYHKGME--LAGNDDGVCAVCLSEFEEGEELRTLPECMHSFHVACIDMWLYSHTNCPLCRSNATPSPLLQHGLPESSSGGSITSTAAPTGP 167

[Close]

BLAST of ppa011056m vs. Vitis vinifera
Match: GSVIVT01013145001 (assembled CDS)

HSP 1 Score: 68.1662 bits (165), Expect = 3.314e-12
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 1

Query:  451 ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            +C++CLSEF E E +R+L +C H FH  CI  WL SHS+CP CR
Sbjct:  105 DCSVCLSEFEEEESLRLLPKCSHAFHVQCIDTWLKSHSNCPLCR 148

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: B9RYZ5_RICCO (RING-H2 finger protein ATL5M, putative OS=Ricinus communis GN=RCOM_1315080 PE=4 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.654e-39
Identity = 88/176 (50.00%), Postives = 102/176 (57.95%), Query Frame = 1

Query:  130 SHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCLXXXXXXXXXXXTTDNSSQRIP 657
            +H CRWWPYS S +F AN AM+              N AIRCFLR                  LPQTQ+EL   ++ +  A  S L  AP + YSA MK  L GAEA+CAICLSEFVEGEGIRVLG CKHGFH HCI++WLS H SCPTCRR+CL             +N+SQ  P
Sbjct:   26 AHGCRWWPYSKSNDFGANTAMILIILLCALICALVLNTAIRCFLRSAAHPPD----------RLPQTQRELDDHRKPNTEASASPLVVAPTVVYSAGMK--LGGAEADCAICLSEFVEGEGIRVLGSCKHGFHVHCIEQWLSCHPSCPTCRRSCLAPGTSVCWPENDLNNASQPPP 189

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: F6HUA1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g03070 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.969e-34
Identity = 80/155 (51.61%), Postives = 93/155 (60.00%), Query Frame = 1

Query:  130 SHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            SH CRW PY+ +K+FEANAAM+              NA IRCFL                   LP+ Q +       S++A        P L +S+ MK  LAGAEAECAICLSEFVEGEGIRV+G+CKHGFH  CIQEWLSSHSSCPTCR +CL
Sbjct:   31 SHDCRWQPYANAKDFEANAAMILIILFCALISALILNAVIRCFLSSRRSSRPPPS--------LPEVQLD------SSSMAAADKQVAPPTLVFSSGMK--LAGAEAECAICLSEFVEGEGIRVMGQCKHGFHVQCIQEWLSSHSSCPTCRGSCL 169

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: B9GJJ3_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_177072 PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 9.144e-32
Identity = 75/154 (48.70%), Postives = 89/154 (57.79%), Query Frame = 1

Query:  133 HTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            H+C+WWPYS S +F AN AM+              N AIR FLR                        EL + ++  + A ++ L  A    YSA MK  L G EA+CAICLSEFVEGEGIRVLGRC HGFH  CI++WLSSHSSCPTCRR+CL
Sbjct:   14 HSCKWWPYSNSNDFGANTAMILIILLCALICALVLNTAIRWFLRSNNNNSSDRLG-------------ELEEQRKPKDEADMATLVLATTQVYSAGMK--LGGVEADCAICLSEFVEGEGIRVLGRCDHGFHVLCIEKWLSSHSSCPTCRRSCL 152

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: B9I0N4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_569229 PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.320e-30
Identity = 73/154 (47.40%), Postives = 91/154 (59.09%), Query Frame = 1

Query:  133 HTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            H+C+WWPYS S +  AN A +              N AIR FLR                 HL    +EL + ++ +  + ++ L  A    Y A MK  LAGAEA+CAICLSEFVEGEGIRVLGRC HGFH HC+++WL+SHSSCPTCR +CL
Sbjct:   35 HSCKWWPYSNSNDAGANTATILMILLCALICALAFNTAIRWFLRSDNDSSSD---------HL----RELEEQRKPNKESDMALLVLATTQVYYAGMK--LAGAEADCAICLSEFVEGEGIRVLGRCNHGFHVHCVEKWLASHSSCPTCRCSCL 173

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: Q1H5E6_ARATH (At5g47610 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 6.782e-27
Identity = 69/154 (44.81%), Postives = 84/154 (54.55%), Query Frame = 1

Query:  121 TCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            TC SHTCRW PYS S +F ANA+++               AAIRCFLR                 H P  +            A  S     P L YS++++  LAGAEAECAICLSEF +GE I+VL +C+HGFH  CI +WLS+ SSCPTCR
Sbjct:   19 TCNSHTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDD---------HKPDPE------------AAASSTPTTPTLVYSSDLE--LAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: D7MP29_ARALL (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_494214 PE=4 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 8.857e-27
Identity = 70/158 (44.30%), Postives = 86/158 (54.43%), Query Frame = 1

Query:  121 TCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            TC SHTCRW PYS S +F ANA+++               AAIRCFLR                 H P  +            A        P L YS++++  LAGAEAECAICLSEF +GE I+VL +C+HGFH  CI +WLS+ SSCPTC RTC+
Sbjct:   19 TCNSHTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDD---------HKPDLE------------AAAPSTATTPTLVYSSDLE--LAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTC-RTCI 152

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: Q2A9Q2_BRAOL (RNA recognition motif. (A.k.a. RRM, RBD, or RNP domain) containing protein OS=Brassica oleracea GN=26.t00016 PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.182e-25
Identity = 69/154 (44.81%), Postives = 86/154 (55.84%), Query Frame = 1

Query:  124 CVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNV-AGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            C S++CRW PYS S +F+ANA+++               AAIRCFLR                     T  E      KS++ A  S     P L YS++++  LAGAEAECAICLSEF +GE I+VL +C HGFH  CI +WLSS SSCPTCR
Sbjct:  435 CNSNSCRWKPYSNSTDFQANASVLLILIFSSLICALSLCAAIRCFLRP--------------------TTPETDDNDHKSDLEADSSFTIPTPTLVYSSDLE--LAGAEAECAICLSEFEQGESIQVLEKCHHGFHVKCIHKWLSSRSSCPTCR 566

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: D7MC11_ARALL (Zinc finger family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_914994 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.721e-25
Identity = 68/156 (43.59%), Postives = 83/156 (53.21%), Query Frame = 1

Query:  118 TTCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWL-SSHSSCPTCR 582
            +TC S +C W PYS S +F ANA ++              +AAIRC LR                 H+P+   +L               + AP L YS  +   LAG EAEC ICLSEF +G+ +RVL RCKHGFH HCIQ+WL SSHSSCPTCR
Sbjct:   15 STCTSQSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCCLRPVLQ-------------HVPKPDPDLEATHP----------DAAPTLVYSPGLN--LAGNEAECIICLSEFQDGDTLRVLERCKHGFHVHCIQQWLSSSHSSCPTCR 145

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: Q940N3_ARATH (AT4g17240/dl4655c OS=Arabidopsis thaliana GN=At4g17245 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.083e-24
Identity = 67/156 (42.95%), Postives = 83/156 (53.21%), Query Frame = 1

Query:  118 TTCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWL-SSHSSCPTCR 582
            +TC SH+C W PYS S +F ANA ++              +AAIRC LR                 H+P+   +L               +  P L YS  +   LAG EAEC ICLSEF +G+ +RVL RCKHGFH +CIQ+WL SSHSSCPTCR
Sbjct:   15 STCTSHSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCCLRPVLQ-------------HVPKPDPDLEATHP----------DAPPTLVYSPGLN--LAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCR 145

[Close]

BLAST of ppa011056m vs. ExPASy TrEMBL
Match: Q2A9U3_BRAOL (Zinc finger, C3HC4 type (RING finger) containing protein OS=Brassica oleracea GN=25.t00064 PE=4 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 7.759e-23
Identity = 64/147 (43.54%), Postives = 78/147 (53.06%), Query Frame = 1

Query:  142 RWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            RW PYS S EF+ANA+++               AAIRCFLR                 H P  +++            VS     P L YS++++  LAGA+AECAICLSEF  GE I VL +C HGFH  CI +WLSS SSCPTCR
Sbjct:   69 RWKPYSNSSEFQANASVLLILFVSALICGLSLCAAIRCFLRPNLQTDDNE--------HKPDPEED------------VSSTVPTPTLVYSSDLE--LAGAQAECAICLSEFEPGESIHVLEKCHHGFHIKCIHKWLSSRSSCPTCR 193

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL79_ARATH (RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.597e-28
Identity = 69/154 (44.81%), Postives = 84/154 (54.55%), Query Frame = 1

Query:  121 TCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            TC SHTCRW PYS S +F ANA+++               AAIRCFLR                 H P  +            A  S     P L YS++++  LAGAEAECAICLSEF +GE I+VL +C+HGFH  CI +WLS+ SSCPTCR
Sbjct:   19 TCNSHTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDD---------HKPDPE------------AAASSTPTTPTLVYSSDLE--LAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL78_ARATH (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.693e-17
Identity = 56/150 (37.33%), Postives = 70/150 (46.67%), Query Frame = 1

Query:  151 PYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVS--CLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            PY G   F+AN  MV              N+ IRC LR                 +L  ++        +    GV    L+    + YS E+   L G + ECAICLSEFV  E +++L  C HGFH  CI +WLSSHSSCPTCR  CL
Sbjct:   45 PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCS---------------NLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELN--LPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRH-CL 176

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.334e-15
Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 1

Query:  394 APELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            +PEL    +MKAT      EC ICL +FVEGE +RVL +C HGFH  CI  WL SHSSCPTCR++ L
Sbjct:  103 SPEL----KMKAT------ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLL 159

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.754e-14
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1

Query:  397 PELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            P + YS EM   L G + EC ICLS+FV GE +R+L +C HGFH  CI +WL  H +CP C R CL
Sbjct:  118 PVVSYSPEMN--LPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKC-RNCL 180

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL75_ARATH (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.059e-13
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 1

Query:  397 PELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            P + YS EM   L G   EC ICLS+FV GE IR+L +C HGFH  CI +WL  H +CP CR  CL
Sbjct:  119 PVVSYSPEMN--LPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRH-CL 181

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.383e-13
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 1

Query:  385 LEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            L+  P + YS E+   L G   EC ICLS+FV GE +RVL +C HGFH  CI +WL+ H +CP CR  CL
Sbjct:  109 LKMLPVVNYSPEIN--LPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRH-CL 175

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.807e-13
Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 1

Query:  385 LEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRR 585
            L   P+L YS +     A    ECAICL+EF  G+ +RVL +C HGFH  CI  WL SHSSCP+CR+
Sbjct:   83 LRSLPKLTYSPDSPP--AEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQ 147

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL76_ARATH (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.807e-13
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1

Query:  397 PELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            P + YS EM   L G   EC ICLS+FV GE +R+L +C HGFH  CI +WL  H +CP CR  CL
Sbjct:  118 PVVSYSREMN--LPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRH-CL 180

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL80_ARATH (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.359e-13
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1

Query:  385 LEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRR 585
            L+  P+L +S E   +     AECAICL+EF  G+ +RVL +C HGFH  CI  WL SHSSCP+CR+
Sbjct:   90 LQSLPKLTFSPESPES--EKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 154

[Close]

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Match: ATL6_ARATH (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.082e-13
Identity = 33/69 (47.83%), Postives = 41/69 (59.42%), Query Frame = 1

Query:  376 VSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            VS +E  P   YS      L   E ECAICL+EF + E +R+L +C H FH HCI  WL +H +CP CR
Sbjct:  102 VSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCR 170

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT5G47610.1 (| Symbols: | RING/U-box superfamily protein | chr5:19301399-19301899 REVERSE LENGTH=166)

HSP 1 Score: 125.561 bits (314), Expect = 2.524e-29
Identity = 69/154 (44.81%), Postives = 84/154 (54.55%), Query Frame = 1

Query:  121 TCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            TC SHTCRW PYS S +F ANA+++               AAIRCFLR                 H P  +            A  S     P L YS++++  LAGAEAECAICLSEF +GE I+VL +C+HGFH  CI +WLS+ SSCPTCR
Sbjct:   19 TCNSHTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDD---------HKPDPE------------AAASSTPTTPTLVYSSDLE--LAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT4G17245.1 (| Symbols: | RING/U-box superfamily protein | chr4:9669383-9669883 FORWARD LENGTH=166)

HSP 1 Score: 118.242 bits (295), Expect = 4.030e-27
Identity = 67/156 (42.95%), Postives = 83/156 (53.21%), Query Frame = 1

Query:  118 TTCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWL-SSHSSCPTCR 582
            +TC SH+C W PYS S +F ANA ++              +AAIRC LR                 H+P+   +L               +  P L YS  +   LAG EAEC ICLSEF +G+ +RVL RCKHGFH +CIQ+WL SSHSSCPTCR
Sbjct:   15 STCTSHSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCCLRPVLQ-------------HVPKPDPDLEATHP----------DAPPTLVYSPGLN--LAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCR 145

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT1G49230.1 (| Symbols: | RING/U-box superfamily protein | chr1:18209320-18209979 FORWARD LENGTH=219)

HSP 1 Score: 88.9669 bits (219), Expect = 2.618e-18
Identity = 56/150 (37.33%), Postives = 70/150 (46.67%), Query Frame = 1

Query:  151 PYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVS--CLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            PY G   F+AN  MV              N+ IRC LR                 +L  ++        +    GV    L+    + YS E+   L G + ECAICLSEFV  E +++L  C HGFH  CI +WLSSHSSCPTCR  CL
Sbjct:   45 PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCS---------------NLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELN--LPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRH-CL 176

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT5G05280.1 (| Symbols: | RING/U-box superfamily protein | chr5:1565509-1566039 REVERSE LENGTH=176)

HSP 1 Score: 80.8777 bits (198), Expect = 7.130e-16
Identity = 39/67 (58.21%), Postives = 46/67 (68.66%), Query Frame = 1

Query:  394 APELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            +PEL    +MKAT      EC ICL +FVEGE +RVL +C HGFH  CI  WL SHSSCPTCR++ L
Sbjct:  103 SPEL----KMKAT------ECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLL 159

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT1G49220.1 (| Symbols: | RING/U-box superfamily protein | chr1:18205946-18206701 FORWARD LENGTH=251)

HSP 1 Score: 78.1814 bits (191), Expect = 4.622e-15
Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 1

Query:  397 PELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            P + YS EM   L G + EC ICLS+FV GE +R+L +C HGFH  CI +WL  H +CP C R CL
Sbjct:  118 PVVSYSPEMN--LPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKC-RNCL 180

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT1G49200.1 (| Symbols: | RING/U-box superfamily protein | chr1:18198298-18198978 FORWARD LENGTH=226)

HSP 1 Score: 77.0258 bits (188), Expect = 1.030e-14
Identity = 36/66 (54.55%), Postives = 42/66 (63.64%), Query Frame = 1

Query:  397 PELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            P + YS EM   L G   EC ICLS+FV GE IR+L +C HGFH  CI +WL  H +CP CR  CL
Sbjct:  119 PVVSYSPEMN--LPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRH-CL 181

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT3G18773.1 (| Symbols: | RING/U-box superfamily protein | chr3:6466304-6466966 FORWARD LENGTH=220)

HSP 1 Score: 76.6406 bits (187), Expect = 1.345e-14
Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 1

Query:  385 LEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            L+  P + YS E+   L G   EC ICLS+FV GE +RVL +C HGFH  CI +WL+ H +CP CR  CL
Sbjct:  109 LKMLPVVNYSPEIN--LPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRH-CL 175

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT1G76410.1 (| Symbols: ATL8 | RING/U-box superfamily protein | chr1:28668915-28669472 FORWARD LENGTH=185)

HSP 1 Score: 76.2554 bits (186), Expect = 1.756e-14
Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 1

Query:  385 LEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRR 585
            L   P+L YS +     A    ECAICL+EF  G+ +RVL +C HGFH  CI  WL SHSSCP+CR+
Sbjct:   83 LRSLPKLTYSPDSPP--AEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQ 147

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT1G49210.1 (| Symbols: | RING/U-box superfamily protein | chr1:18201994-18202671 FORWARD LENGTH=225)

HSP 1 Score: 76.2554 bits (186), Expect = 1.756e-14
Identity = 35/66 (53.03%), Postives = 42/66 (63.64%), Query Frame = 1

Query:  397 PELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            P + YS EM   L G   EC ICLS+FV GE +R+L +C HGFH  CI +WL  H +CP CR  CL
Sbjct:  118 PVVSYSREMN--LPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRH-CL 180

[Close]

BLAST of ppa011056m vs. TAIR10
Match: AT1G20823.1 (| Symbols: | RING/U-box superfamily protein | chr1:7238880-7239473 FORWARD LENGTH=197)

HSP 1 Score: 75.8702 bits (185), Expect = 2.294e-14
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1

Query:  385 LEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRR 585
            L+  P+L +S E   +     AECAICL+EF  G+ +RVL +C HGFH  CI  WL SHSSCP+CR+
Sbjct:   90 LQSLPKLTFSPESPES--EKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQ 154

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0001s45800.1 ()

HSP 1 Score: 141.739 bits (356), Expect = 3.867e-34
Identity = 75/154 (48.70%), Postives = 89/154 (57.79%), Query Frame = 1

Query:  133 HTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            H+C+WWPYS S +F AN AM+              N AIR FLR                        EL + ++  + A ++ L  A    YSA MK  L G EA+CAICLSEFVEGEGIRVLGRC HGFH  CI++WLSSHSSCPTCRR+CL
Sbjct:   35 HSCKWWPYSNSNDFGANTAMILIILLCALICALVLNTAIRWFLRSNNNNSSDRLG-------------ELEEQRKPKDEADMATLVLATTQVYSAGMK--LGGVEADCAICLSEFVEGEGIRVLGRCDHGFHVLCIEKWLSSHSSCPTCRRSCL 173

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0011s15100.1 ()

HSP 1 Score: 137.887 bits (346), Expect = 5.584e-33
Identity = 73/154 (47.40%), Postives = 91/154 (59.09%), Query Frame = 1

Query:  133 HTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            H+C+WWPYS S +  AN A +              N AIR FLR                 HL    +EL + ++ +  + ++ L  A    Y A MK  LAGAEA+CAICLSEFVEGEGIRVLGRC HGFH HC+++WL+SHSSCPTCR +CL
Sbjct:   35 HSCKWWPYSNSNDAGANTATILMILLCALICALAFNTAIRWFLRSDNDSSSD---------HL----RELEEQRKPNKESDMALLVLATTQVYYAGMK--LAGAEADCAICLSEFVEGEGIRVLGRCNHGFHVHCVEKWLASHSSCPTCRCSCL 173

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0019s02620.1 ()

HSP 1 Score: 92.0485 bits (227), Expect = 3.514e-19
Identity = 59/176 (33.52%), Postives = 82/176 (46.59%), Query Frame = 1

Query:  151 PYSGS-KEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVS--CLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCLXXXXXXXXXXXTTDNSSQRIPAPES 669
            P +G+   F+AN  MV              N+ IRC LR                 ++  ++     + Q +N  GV+   L+  P + YS+++   L G + EC ICLSEF  GE +R+L +C HGFH  CI +WLSSHSSCPTCR  CL               S   +P  E+
Sbjct:   49 PSTGTGSSFDANVVMVLSVLLCALICSLGLNSIIRCALRCS---------------NIAASESAANPSTQSANT-GVNRRALKSFPVVNYSSDLN--LPGLDTECVICLSEFTPGERVRLLPKCHHGFHVKCIDKWLSSHSSCPTCRH-CLIETCQKIIGCSQASTSGTSLPVQET 205

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0001s31710.1 ()

HSP 1 Score: 89.3521 bits (220), Expect = 2.278e-18
Identity = 54/146 (36.99%), Postives = 69/146 (47.26%), Query Frame = 1

Query:  157 SGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            S    F+AN  MV              N+ IRC LR                   P TQ      ++K+       L+  P + YS ++   L G + +C ICLSEF  GE +R+L +C HGFH  CI +WLSSHSSCPTCR  CL
Sbjct:   53 STDNSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNLVASESAAN-------PSTQAANTGVKRKA-------LKTFPIVKYSTDLN--LPGLDTQCVICLSEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRH-CL 181

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0001s31720.1 ()

HSP 1 Score: 87.8113 bits (216), Expect = 6.627e-18
Identity = 51/146 (34.93%), Postives = 65/146 (44.52%), Query Frame = 1

Query:  157 SGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            +G K F+ N  MV              N+ IRC +R                          +     +       L   P   YS E K+ L G + +C IC+SEFV G+ +R+L +C HGFH  CI EWLSSHSSCPTCR  CL
Sbjct:   54 NGDKHFDINVVMVLIVLICALLVSLGLNSFIRCAVRC-----------------------SYLNGNSSNRGIKKKALRTFPIENYSPE-KSKLPGLDTQCVICISEFVHGDRVRILPKCSHGFHVKCIDEWLSSHSSCPTCRH-CL 174

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0013s09370.1 ()

HSP 1 Score: 85.8853 bits (211), Expect = 2.518e-17
Identity = 50/147 (34.01%), Postives = 64/147 (43.54%), Query Frame = 1

Query:  154 YSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            YS    F++N  ++              N+ +RC LR                    QT   L     K      S L   P + Y      T+A    +CAICL EF++GE +RVL +C HGFH  CI  WL SHSSCPTCR + L
Sbjct:   32 YSSDANFDSNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPD---------QTAARLAATGLKK-----SALRQIPVIIYGVSGIHTIA---TDCAICLGEFIDGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPTCRHSLL 161

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0005s10190.1 ()

HSP 1 Score: 80.4925 bits (197), Expect = 1.058e-15
Identity = 38/68 (55.88%), Postives = 46/68 (67.65%), Query Frame = 1

Query:  385 LEGAPELFYSAEMK-ATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRR 585
            L+  P   YSA    AT +    ECAICL EFVEG+ +RVL +C HGFH  CI +WL SHSSCP+CR+
Sbjct:   77 LQLLPRFTYSAGGGGATTSFGTTECAICLGEFVEGDEVRVLPQCGHGFHVGCIDKWLGSHSSCPSCRQ 144

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0019s02610.1 ()

HSP 1 Score: 80.4925 bits (197), Expect = 1.058e-15
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 1

Query:  385 LEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            L+  P + YSA+  + L G + EC IC+SEFV G+ +R+L +C H FH  CI  WLSSHSSCPTCR  CL
Sbjct:  100 LKTFPVVNYSAK-DSKLPGLDTECVICISEFVFGDRVRILPKCSHVFHVRCIDMWLSSHSSCPTCRH-CL 167

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0019s08600.1 ()

HSP 1 Score: 78.1814 bits (191), Expect = 5.251e-15
Identity = 46/147 (31.29%), Postives = 61/147 (41.50%), Query Frame = 1

Query:  154 YSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            Y+    F+ N  ++              N+ +RC +R                    QT   +     K      S L   P + Y       +A    +CAICL EF+ GE +RVL  C HGFH  CI  WL SHSSCPTCR++ L
Sbjct:   32 YNSEANFDTNMVIILAALLCALICALGLNSIVRCAIRCSRRFTFETRD---------QTAAHMAATGLKK-----SALRRIPVIIYGVAGIHLIA---TDCAICLGEFIGGEKVRVLPNCNHGFHVRCIDTWLVSHSSCPTCRQSLL 161

[Close]

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Match: POPTR_0016s14320.1 ()

HSP 1 Score: 77.0258 bits (188), Expect = 1.170e-14
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 1

Query:  451 ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            EC ICL EFV+GE +RVL +C HGFH  CI  WL SHSSCP CR + L
Sbjct:  109 ECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLL 156

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000124719 (MDP0000124719)

HSP 1 Score: 225.713 bits (574), Expect = 2.742e-59
Identity = 118/213 (55.40%), Postives = 133/213 (62.44%), Query Frame = 1

Query:   43 AASQVAEFGFVHXXXXXXXXXXTRQTTCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL--XXXXXXXXXXXTTDNSSQRIPAPESGP 675
            +A +V EFG +H          T  TTCVSH CRWWPYSGSKEFEANAAM+              NAAIRCFLR                  +PQ++Q LV  QQKSNVA  SCLE AP + Y+AEMKA LAG EAECAICLSEFVEGEGIRVL RCKHGFH  CIQ+WLSSHSSCPTCRRTCL             + D++ ++ P  ES P
Sbjct:   10 SAGEVVEFGLIHLPTPLPSPP-TGPTTCVSHACRWWPYSGSKEFEANAAMIIIVLLSALISALGLNAAIRCFLRGGRGYPSDRENNS-----VPQSRQALVDVQQKSNVATASCLEAAPTVIYTAEMKAKLAGVEAECAICLSEFVEGEGIRVLRRCKHGFHAQCIQKWLSSHSSCPTCRRTCLPQSPSQSPAPPQPSADHNPEQNPVXESSP 216

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000210058 (MDP0000210058)

HSP 1 Score: 223.402 bits (568), Expect = 1.361e-58
Identity = 117/213 (54.93%), Postives = 130/213 (61.03%), Query Frame = 1

Query:   43 AASQVAEFGFVHXXXXXXXXXXTRQTTCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL--XXXXXXXXXXXTTDNSSQRIPAPESGP 675
            +A +VA+   +H             TTC SH CRWWPYSGSKEFEANAAM+              NAAIRCF+R                   PQ QQ LV  QQKSNVA   CLE AP + Y+AEMKA LAG EAECAICLSEFVEGEGIRV+GRCKHGFH  CIQEWLSSHSSCPTCRRTCL               ++SS++ P PESGP
Sbjct:   10 SAVEVADVNLIHLSPPLPSPP-AGPTTCGSHACRWWPYSGSKEFEANAAMIIIVLLCALICALGLNAAIRCFVRGGSTNPSDRQNNSA-----PQRQQALVDVQQKSNVAAAKCLEAAPAVIYTAEMKAKLAGVEAECAICLSEFVEGEGIRVIGRCKHGFHAQCIQEWLSSHSSCPTCRRTCLPQSPSQSPPPPQPAREHSSEQNPMPESGP 216

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000853517 (MDP0000853517)

HSP 1 Score: 92.4337 bits (228), Expect = 3.623e-19
Identity = 52/147 (35.37%), Postives = 65/147 (44.22%), Query Frame = 1

Query:  154 YSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            Y G   F+AN  MV              N  I+C LR                            A+  +       L+  P + YS E+K  L G + ECAICLSEF  GE +R+L +C HGFH  CI +WLSSHSSCP CR   +
Sbjct:   54 YPGDNSFDANVVMVLSVLLCALICSLGLNFIIKCALRCSSFVSSSESRSAG--------NNNATSARLANTGVKKKALKTFPTVNYSVELK--LPGLDTECAICLSEFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLI 190

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000195974 (MDP0000195974)

HSP 1 Score: 77.411 bits (189), Expect = 1.206e-14
Identity = 35/62 (56.45%), Postives = 41/62 (66.13%), Query Frame = 1

Query:  397 PELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            P + Y+AE  A LA    ECAICL EFV+G+  RVL  C HGFH  C+  WL  HSSCP+CR
Sbjct:   86 PSVSYNAEADARLA----ECAICLMEFVDGDVTRVLPHCGHGFHVSCVDRWLRCHSSCPSCR 143

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000247371 (MDP0000247371)

HSP 1 Score: 77.411 bits (189), Expect = 1.206e-14
Identity = 45/149 (30.20%), Postives = 65/149 (43.62%), Query Frame = 1

Query:  154 YSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGV--SCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            Y+    F++N  ++              N+ +RC LR                   P+T  E      +  V G+  S L   P + Y   +      A  +C ICL EF++G+ +R+L +C HGFH  CI  W  SHSSCPTCR + L
Sbjct:   47 YANEANFDSNMVIILAALLCALIFALGLNSIVRCALRCSRRFS-------------PETPDETAA---RLAVTGLKKSILRRIPIVIYGTGLNI----AATDCPICLGEFMDGQKVRLLPKCNHGFHARCIDTWFLSHSSCPTCRHSLL 175

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000864704 (MDP0000864704)

HSP 1 Score: 75.485 bits (184), Expect = 4.583e-14
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 1

Query:  385 LEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRR 585
            L   P+L Y+A+  +       ECAICL+EF  G+ IR L +C HGFH  CI  WL SHSSCP+CR+
Sbjct:   89 LRSLPKLTYTADCTSKFT----ECAICLTEFASGDEIRELPQCGHGFHVACIDTWLRSHSSCPSCRQ 151

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000766466 (MDP0000766466)

HSP 1 Score: 75.0998 bits (183), Expect = 5.986e-14
Identity = 36/74 (48.65%), Postives = 41/74 (55.41%), Query Frame = 1

Query:   43 AASQVAEFGFVHXXXXXXXXXXTRQTTCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLR 264
            +  ++ EFG +H          T  TTCVSHTCRWWPYSG KEFEANAAM+              N AI CFLR
Sbjct:   10 SVGEIVEFGLIHLSPPLPSPS-TGLTTCVSHTCRWWPYSGLKEFEANAAMIIIFILSALISALGLNTAIHCFLR 82

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000486156 (MDP0000486156)

HSP 1 Score: 74.7146 bits (182), Expect = 7.818e-14
Identity = 35/75 (46.67%), Postives = 42/75 (56.00%), Query Frame = 1

Query:  451 ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCLXXXXXXXXXXXTTDNSSQRIPAPESGP 675
            EC ICL+EF +GE +RVL +C HGFH  CI  W  SHSSCP CR + L      X      D+S +   A E  P
Sbjct:  107 ECPICLTEFEDGEKVRVLPKCNHGFHVRCIDTWFLSHSSCPNCRHSLL--STSSXAAAVAADSSGEAAAAEEESP 179

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000231890 (MDP0000231890)

HSP 1 Score: 74.7146 bits (182), Expect = 7.818e-14
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 1

Query:  451 ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            EC ICL+EF +GE +RVL +C HGFH  CI  WL SHSSCP CR + L
Sbjct:  107 ECPICLAEFEDGEKVRVLPKCHHGFHVRCIDTWLLSHSSCPNCRHSLL 154

[Close]

BLAST of ppa011056m vs. GDR
Match: MDP0000131315 (MDP0000131315)

HSP 1 Score: 74.7146 bits (182), Expect = 7.818e-14
Identity = 30/48 (62.50%), Postives = 35/48 (72.92%), Query Frame = 1

Query:  451 ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            EC ICL+EF +GE +RVL +C HGFH  CI  WL SHSSCP CR + L
Sbjct:  107 ECPICLAEFEDGEKVRVLPKCHHGFHVRCIDTWLLSHSSCPNCRHSLL 154

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|255555857|ref|XP_002518964.1| (RING-H2 finger protein ATL5M precursor, putative [Ricinus communis] >gi|223541951|gb|EEF43497.1| RING-H2 finger protein ATL5M precursor, putative [Ricinus communis])

HSP 1 Score: 166.777 bits (421), Expect = 2.450e-39
Identity = 88/176 (50.00%), Postives = 102/176 (57.95%), Query Frame = 1

Query:  130 SHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCLXXXXXXXXXXXTTDNSSQRIP 657
            +H CRWWPYS S +F AN AM+              N AIRCFLR                  LPQTQ+EL   ++ +  A  S L  AP + YSA MK  L GAEA+CAICLSEFVEGEGIRVLG CKHGFH HCI++WLS H SCPTCRR+CL             +N+SQ  P
Sbjct:   26 AHGCRWWPYSKSNDFGANTAMILIILLCALICALVLNTAIRCFLRSAAHPPD----------RLPQTQRELDDHRKPNTEASASPLVVAPTVVYSAGMK--LGGAEADCAICLSEFVEGEGIRVLGSCKHGFHVHCIEQWLSCHPSCPTCRRSCLAPGTSVCWPENDLNNASQPPP 189

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|225426496|ref|XP_002277530.1| (PREDICTED: RING-H2 finger protein ATL79 [Vitis vinifera])

HSP 1 Score: 150.599 bits (379), Expect = 1.817e-34
Identity = 80/155 (51.61%), Postives = 93/155 (60.00%), Query Frame = 1

Query:  130 SHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            SH CRW PY+ +K+FEANAAM+              NA IRCFL                   LP+ Q +       S++A        P L +S+ MK  LAGAEAECAICLSEFVEGEGIRV+G+CKHGFH  CIQEWLSSHSSCPTCR +CL
Sbjct:   31 SHDCRWQPYANAKDFEANAAMILIILFCALISALILNAVIRCFLSSRRSSRPPPS--------LPEVQLD------SSSMAAADKQVAPPTLVFSSGMK--LAGAEAECAICLSEFVEGEGIRVMGQCKHGFHVQCIQEWLSSHSSCPTCRGSCL 169

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|224061537|ref|XP_002300529.1| (predicted protein [Populus trichocarpa] >gi|222847787|gb|EEE85334.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 141.739 bits (356), Expect = 8.440e-32
Identity = 75/154 (48.70%), Postives = 89/154 (57.79%), Query Frame = 1

Query:  133 HTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            H+C+WWPYS S +F AN AM+              N AIR FLR                        EL + ++  + A ++ L  A    YSA MK  L G EA+CAICLSEFVEGEGIRVLGRC HGFH  CI++WLSSHSSCPTCRR+CL
Sbjct:   14 HSCKWWPYSNSNDFGANTAMILIILLCALICALVLNTAIRWFLRSNNNNSSDRLG-------------ELEEQRKPKDEADMATLVLATTQVYSAGMK--LGGVEADCAICLSEFVEGEGIRVLGRCDHGFHVLCIEKWLSSHSSCPTCRRSCL 152

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|224115444|ref|XP_002317036.1| (predicted protein [Populus trichocarpa] >gi|222860101|gb|EEE97648.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 137.887 bits (346), Expect = 1.219e-30
Identity = 73/154 (47.40%), Postives = 91/154 (59.09%), Query Frame = 1

Query:  133 HTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            H+C+WWPYS S +  AN A +              N AIR FLR                 HL    +EL + ++ +  + ++ L  A    Y A MK  LAGAEA+CAICLSEFVEGEGIRVLGRC HGFH HC+++WL+SHSSCPTCR +CL
Sbjct:   35 HSCKWWPYSNSNDAGANTATILMILLCALICALAFNTAIRWFLRSDNDSSSD---------HL----RELEEQRKPNKESDMALLVLATTQVYYAGMK--LAGAEADCAICLSEFVEGEGIRVLGRCNHGFHVHCVEKWLASHSSCPTCRCSCL 173

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|15238143|ref|NP_199572.1| (RING-H2 finger protein ATL79 [Arabidopsis thaliana] >gi|68565286|sp|Q9FGJ6.1|ATL79_ARATH RecName: Full=RING-H2 finger protein ATL79; Flags: Precursor >gi|9758789|dbj|BAB09087.1| unnamed protein product [Arabidopsis thaliana] >gi|21553634|gb|AAM62727.1| unknown [Arabidopsis thaliana] >gi|51969080|dbj|BAD43232.1| unknown protein [Arabidopsis thaliana] >gi|51971483|dbj|BAD44406.1| unknown protein [Arabidopsis thaliana] >gi|98960905|gb|ABF58936.1| At5g47610 [Arabidopsis thaliana] >gi|332008154|gb|AED95537.1| RING-H2 finger protein ATL79 [Arabidopsis thaliana])

HSP 1 Score: 125.561 bits (314), Expect = 6.259e-27
Identity = 69/154 (44.81%), Postives = 84/154 (54.55%), Query Frame = 1

Query:  121 TCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            TC SHTCRW PYS S +F ANA+++               AAIRCFLR                 H P  +            A  S     P L YS++++  LAGAEAECAICLSEF +GE I+VL +C+HGFH  CI +WLS+ SSCPTCR
Sbjct:   19 TCNSHTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDD---------HKPDPE------------AAASSTPTTPTLVYSSDLE--LAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|297790891|ref|XP_002863330.1| (zinc finger family protein [Arabidopsis lyrata subsp. lyrata] >gi|297309165|gb|EFH39589.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 125.176 bits (313), Expect = 8.175e-27
Identity = 70/158 (44.30%), Postives = 86/158 (54.43%), Query Frame = 1

Query:  121 TCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCL 594
            TC SHTCRW PYS S +F ANA+++               AAIRCFLR                 H P  +            A        P L YS++++  LAGAEAECAICLSEF +GE I+VL +C+HGFH  CI +WLS+ SSCPTC RTC+
Sbjct:   19 TCNSHTCRWKPYSNSTDFTANASVLLILVISALICALSLYAAIRCFLRPTLETEDD---------HKPDLE------------AAAPSTATTPTLVYSSDLE--LAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTC-RTCI 152

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|89257506|gb|ABD64996.1| (RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing protein [Brassica oleracea])

HSP 1 Score: 120.553 bits (301), Expect = 2.013e-25
Identity = 69/154 (44.81%), Postives = 86/154 (55.84%), Query Frame = 1

Query:  124 CVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNV-AGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            C S++CRW PYS S +F+ANA+++               AAIRCFLR                     T  E      KS++ A  S     P L YS++++  LAGAEAECAICLSEF +GE I+VL +C HGFH  CI +WLSS SSCPTCR
Sbjct:  435 CNSNSCRWKPYSNSTDFQANASVLLILIFSSLICALSLCAAIRCFLRP--------------------TTPETDDNDHKSDLEADSSFTIPTPTLVYSSDLE--LAGAEAECAICLSEFEQGESIQVLEKCHHGFHVKCIHKWLSSRSSCPTCR 566

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|297804462|ref|XP_002870115.1| (zinc finger family protein [Arabidopsis lyrata subsp. lyrata] >gi|297315951|gb|EFH46374.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 119.783 bits (299), Expect = 3.434e-25
Identity = 68/156 (43.59%), Postives = 83/156 (53.21%), Query Frame = 1

Query:  118 TTCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWL-SSHSSCPTCR 582
            +TC S +C W PYS S +F ANA ++              +AAIRC LR                 H+P+   +L               + AP L YS  +   LAG EAEC ICLSEF +G+ +RVL RCKHGFH HCIQ+WL SSHSSCPTCR
Sbjct:   15 STCTSQSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCCLRPVLQ-------------HVPKPDPDLEATHP----------DAAPTLVYSPGLN--LAGNEAECIICLSEFQDGDTLRVLERCKHGFHVHCIQQWLSSSHSSCPTCR 145

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|18414851|ref|NP_567525.1| (RING/U-box domain-containing protein [Arabidopsis thaliana] >gi|17981651|gb|AAL51109.1|AF458337_1 AT4g17240/dl4655c [Arabidopsis thaliana] >gi|15809954|gb|AAL06904.1| AT4g17240/dl4655c [Arabidopsis thaliana] >gi|332658468|gb|AEE83868.1| RING/U-box domain-containing protein [Arabidopsis thaliana])

HSP 1 Score: 118.242 bits (295), Expect = 9.993e-25
Identity = 67/156 (42.95%), Postives = 83/156 (53.21%), Query Frame = 1

Query:  118 TTCVSHTCRWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWL-SSHSSCPTCR 582
            +TC SH+C W PYS S +F ANA ++              +AAIRC LR                 H+P+   +L               +  P L YS  +   LAG EAEC ICLSEF +G+ +RVL RCKHGFH +CIQ+WL SSHSSCPTCR
Sbjct:   15 STCTSHSCGWKPYSHSNDFAANAFLLLIILFCSFICVLSLHAAIRCCLRPVLQ-------------HVPKPDPDLEATHP----------DAPPTLVYSPGLN--LAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCR 145

[Close]

BLAST of ppa011056m vs. NCBI nr
Match: gi|89257469|gb|ABD64960.1| (zinc finger, C3HC4 type (RING finger) containing protein [Brassica oleracea])

HSP 1 Score: 112.079 bits (279), Expect = 7.161e-23
Identity = 64/147 (43.54%), Postives = 78/147 (53.06%), Query Frame = 1

Query:  142 RWWPYSGSKEFEANAAMVXXXXXXXXXXXXXXNAAIRCFLRXXXXXXXXXXXXXXXXXHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEAECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCR 582
            RW PYS S EF+ANA+++               AAIRCFLR                 H P  +++            VS     P L YS++++  LAGA+AECAICLSEF  GE I VL +C HGFH  CI +WLSS SSCPTCR
Sbjct:   69 RWKPYSNSSEFQANASVLLILFVSALICGLSLCAAIRCFLRPNLQTDDNE--------HKPDPEED------------VSSTVPTPTLVYSSDLE--LAGAQAECAICLSEFEPGESIHVLEKCHHGFHIKCIHKWLSSRSSCPTCR 193

The following BLAST results are available for this feature:

BLAST of ppa011056m vs. Vitis vinifera
BLAST of ppa011056m vs. ExPASy TrEMBL
BLAST of ppa011056m vs. ExPASy Swiss-Prot
BLAST of ppa011056m vs. TAIR10
BLAST of ppa011056m vs. Populus trichicarpa v2.0
BLAST of ppa011056m vs. GDR
BLAST of ppa011056m vs. NCBI nr

BLAST of ppa011056m vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Vitis vinifera)
Total hits: 25


Match Name	E-value	Identity	Description
GSVIVT01022306001	1.536e-17	58.21	assembled CDS	[more]
GSVIVT01032684001	1.030e-13	60.42	assembled CDS	[more]
GSVIVT01015336001	2.998e-13	38.37	assembled CDS	[more]
GSVIVT01015682001	3.915e-13	39.74	assembled CDS	[more]
GSVIVT01026703001	8.721e-13	59.09	assembled CDS	[more]
GSVIVT01009098001	8.721e-13	49.28	assembled CDS	[more]
GSVIVT01016661001	1.139e-12	61.36	assembled CDS	[more]
GSVIVT01028038001	1.488e-12	52.17	assembled CDS	[more]
GSVIVT01016564001	1.488e-12	46.27	assembled CDS	[more]
GSVIVT01013145001	3.314e-12	56.82	assembled CDS	[more]

Pages

BLAST of ppa011056m vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
B9RYZ5_RICCO	2.654e-39	50.00	RING-H2 finger protein ATL5M, putative OS=Ricinus ...	[more]
F6HUA1_VITVI	1.969e-34	51.61	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9GJJ3_POPTR	9.144e-32	48.70	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B9I0N4_POPTR	1.320e-30	47.40	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q1H5E6_ARATH	6.782e-27	44.81	At5g47610 OS=Arabidopsis thaliana PE=2 SV=1	[more]
D7MP29_ARALL	8.857e-27	44.30	Zinc finger family protein OS=Arabidopsis lyrata s...	[more]
Q2A9Q2_BRAOL	2.182e-25	44.81	RNA recognition motif. (A.k.a. RRM, RBD, or RNP do...	[more]
D7MC11_ARALL	3.721e-25	43.59	Zinc finger family protein OS=Arabidopsis lyrata s...	[more]
Q940N3_ARATH	1.083e-24	42.95	AT4g17240/dl4655c OS=Arabidopsis thaliana GN=At4g1...	[more]
Q2A9U3_BRAOL	7.759e-23	43.54	Zinc finger, C3HC4 type (RING finger) containing p...	[more]

Pages

BLAST of ppa011056m vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot)
Total hits: 25


Match Name	E-value	Identity	Description
ATL79_ARATH	2.597e-28	44.81	RING-H2 finger protein ATL79 OS=Arabidopsis thalia...	[more]
ATL78_ARATH	2.693e-17	37.33	RING-H2 finger protein ATL78 OS=Arabidopsis thalia...	[more]
ATL73_ARATH	7.334e-15	58.21	RING-H2 finger protein ATL73 OS=Arabidopsis thalia...	[more]
ATL10_ARATH	4.754e-14	53.03	RING-H2 finger protein ATL10 OS=Arabidopsis thalia...	[more]
ATL75_ARATH	1.059e-13	54.55	RING-H2 finger protein ATL75 OS=Arabidopsis thalia...	[more]
ATL77_ARATH	1.383e-13	51.43	RING-H2 finger protein ATL77 OS=Arabidopsis thalia...	[more]
ATL8_ARATH	1.807e-13	52.24	RING-H2 finger protein ATL8 OS=Arabidopsis thalian...	[more]
ATL76_ARATH	1.807e-13	53.03	E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis t...	[more]
ATL80_ARATH	2.359e-13	52.24	RING-H2 finger protein ATL80 OS=Arabidopsis thalia...	[more]
ATL6_ARATH	3.082e-13	47.83	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis th...	[more]

Pages

BLAST of ppa011056m vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs TAIR 10)
Total hits: 25


Match Name	E-value	Identity	Description
AT5G47610.1	2.524e-29	44.81	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT4G17245.1	4.030e-27	42.95	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G49230.1	2.618e-18	37.33	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT5G05280.1	7.130e-16	58.21	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G49220.1	4.622e-15	53.03	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G49200.1	1.030e-14	54.55	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT3G18773.1	1.345e-14	51.43	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G76410.1	1.756e-14	52.24	\| Symbols: ATL8 \| RING/U-box superfamily protein \|...	[more]
AT1G49210.1	1.756e-14	53.03	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G20823.1	2.294e-14	52.24	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]

Pages

BLAST of ppa011056m vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0)
Total hits: 25


Match Name	E-value	Identity
POPTR_0001s45800.1	3.867e-34	48.70	[more]
POPTR_0011s15100.1	5.584e-33	47.40	[more]
POPTR_0019s02620.1	3.514e-19	33.52	[more]
POPTR_0001s31710.1	2.278e-18	36.99	[more]
POPTR_0001s31720.1	6.627e-18	34.93	[more]
POPTR_0013s09370.1	2.518e-17	34.01	[more]
POPTR_0005s10190.1	1.058e-15	55.88	[more]
POPTR_0019s02610.1	1.058e-15	54.29	[more]
POPTR_0019s08600.1	5.251e-15	31.29	[more]
POPTR_0016s14320.1	1.170e-14	64.58	[more]

Pages

BLAST of ppa011056m vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0)
Total hits: 25


Match Name	E-value	Identity	Description
MDP0000124719	2.742e-59	55.40	MDP0000124719	[more]
MDP0000210058	1.361e-58	54.93	MDP0000210058	[more]
MDP0000853517	3.623e-19	35.37	MDP0000853517	[more]
MDP0000195974	1.206e-14	56.45	MDP0000195974	[more]
MDP0000247371	1.206e-14	30.20	MDP0000247371	[more]
MDP0000864704	4.583e-14	50.75	MDP0000864704	[more]
MDP0000766466	5.986e-14	48.65	MDP0000766466	[more]
MDP0000486156	7.818e-14	46.67	MDP0000486156	[more]
MDP0000231890	7.818e-14	62.50	MDP0000231890	[more]
MDP0000131315	7.818e-14	62.50	MDP0000131315	[more]

Pages

BLAST of ppa011056m vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs NCBI nr )
Total hits: 25


Match Name	E-value	Identity	Description
gi\|255555857\|ref\|XP_002518964.1\|	2.450e-39	50.00	RING-H2 finger protein ATL5M precursor, putative [...	[more]
gi\|225426496\|ref\|XP_002277530.1\|	1.817e-34	51.61	PREDICTED: RING-H2 finger protein ATL79 [Vitis vin...	[more]
gi\|224061537\|ref\|XP_002300529.1\|	8.440e-32	48.70	predicted protein [Populus trichocarpa] >gi\|222847...	[more]
gi\|224115444\|ref\|XP_002317036.1\|	1.219e-30	47.40	predicted protein [Populus trichocarpa] >gi\|222860...	[more]
gi\|15238143\|ref\|NP_199572.1\|	6.259e-27	44.81	RING-H2 finger protein ATL79 [Arabidopsis thaliana...	[more]
gi\|297790891\|ref\|XP_002863330.1\|	8.175e-27	44.30	zinc finger family protein [Arabidopsis lyrata sub...	[more]
gi\|89257506\|gb\|ABD64996.1\|	2.013e-25	44.81	RNA recognition motif. (a.k.a. RRM, RBD, or RNP do...	[more]
gi\|297804462\|ref\|XP_002870115.1\|	3.434e-25	43.59	zinc finger family protein [Arabidopsis lyrata sub...	[more]
gi\|18414851\|ref\|NP_567525.1\|	9.993e-25	42.95	RING/U-box domain-containing protein [Arabidopsis ...	[more]
gi\|89257469\|gb\|ABD64960.1\|	7.161e-23	43.54	zinc finger, C3HC4 type (RING finger) containing p...	[more]

Pages

InterPro

Analysis Name: InterProScan of Prunus persica Whole Genome v1.0
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	Ring finger	coord: 152..193 score: 4.7
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 152..194 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 149..196 score: 1.2
None	No IPR available	PANTHER	PTHR22764	FAMILY NOT NAMED	coord: 63..222 score: 1.6
None	No IPR available	PFAM	PF13639	zf-RING_2	coord: 151..195 score: 2.8
None	No IPR available	SEG	seg	seg	coord: 2..9 score: NAcoord: 27..36 score: NAcoord: 66..79 score: NAcoord: 89..105 score: NAcoord: 199..209 score
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 125..219 score: 5.3
None	No IPR available	SEG	seg	seg	coord: 12..35 score
None	No IPR available	SEG	seg	seg	coord: 1..9 score: NAcoord: 50..70 score
None	No IPR available	SEG	seg	seg	coord: 58..81 score
None	No IPR available	SEG	seg	seg	coord: 26..47 score: NAcoord: 83..96 score
None	No IPR available	SEG	seg	seg	coord: 16..42 score: NAcoord: 76..89 score: NAcoord: 107..118 score: NAcoord: 123..149 score: NAcoord: 154..167 score: NAcoord: 190..200 score
None	No IPR available	SEG	seg	seg	coord: 15..36 score: NAcoord: 68..85 score
None	No IPR available	SEG	seg	seg	coord: 30..41 score
None	No IPR available	SEG	seg	seg	coord: 1..19 score
None	No IPR available	SEG	seg	seg	coord: 35..50 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_5:12945050..12945936-
coding sequence from alignment at scaffold_5:12945050..12945936-

mRNA sequence

>ppa011056m ID=ppa011056m; Name=ppa011056m; organism=Prunus persica; type=mRNA; length=887bp
CTCTCTCTTTCTCTCTCTCTCCATCATCATTCAACAACCTCATGTCAGAA
TCCAAAGAACCCAAAAAAAGAAAACAGTAAAAGAAAAACACCAGAATTAA
TATAAAACATTCCCCTTTCTGCAAAAGGAAAGCTGGATCATCAGAAAAAC
AGAGCAAATTAAAACAAAACATAAATGAGACCGCCACCACCGCCAAGAAG
ATCACTGGAGCTATCAGCAGCATCCCAAGTAGCTGAATTTGGCTTCGTCC
ACCTCTCTCCGTCGCTCTCCTCCCCTCCCCCCACCAGACAAACGACATGC
GTTTCGCACACCTGCCGCTGGTGGCCCTACTCTGGCTCCAAAGAGTTCGA
GGCCAACGCCGCCATGGTCATAATCATCCTCCTCTCCGCCCTCATTTGTG
CTTTGGGCCTCAACGCCGCCATCCGCTGCTTCCTCCGCGGCGGCGGGAGC
GACGACAACAACAGCCCACGGGACAACGATGATAGCAGTCATCTTCCGCA
GACCCAGCAAGAATTGGTTCAAGCTCAGCAGAAGAGCAATGTGGCGGGAG
TTTCGTGCCTGGAGGGGGCGCCGGAACTTTTCTACTCGGCGGAGATGAAG
GCGACGCTGGCGGGGGCGGAGGCGGAGTGCGCCATTTGTTTGTCGGAGTT
TGTGGAGGGGGAAGGGATCAGAGTGCTGGGGAGGTGCAAACATGGCTTCC
ATACTCACTGCATACAGGAGTGGCTGTCTTCTCACTCCTCTTGTCCCACC
TGCCGCCGCACGTGCCTTCCTCAATCGCCGCCTCCATCGCCACCACAACC
CACCACGGACAATAGTTCCCAGCGAATTCCCGCGCCGGAAAGCGGTCCAT
AGAGCTAGCCGCTGTACACAACATGTATGTAACTAGT

protein sequence of ppa011056m

>ppa011056m ID=ppa011056m; Name=ppa011056m; organism=Prunus persica; type=polypeptide; length=226bp
MRPPPPPRRSLELSAASQVAEFGFVHLSPSLSSPPPTRQTTCVSHTCRWW
PYSGSKEFEANAAMVIIILLSALICALGLNAAIRCFLRGGGSDDNNSPRD
NDDSSHLPQTQQELVQAQQKSNVAGVSCLEGAPELFYSAEMKATLAGAEA
ECAICLSEFVEGEGIRVLGRCKHGFHTHCIQEWLSSHSSCPTCRRTCLPQ
SPPPSPPQPTTDNSSQRIPAPESGP*

mRNA from alignment at scaffold_5:12945050..12945936-

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>ppa011056m ID=ppa011056m; Name=ppa011056m; organism=Prunus persica; type=mRNA; length=887bp; location=Sequence derived from: scaffold_5:12945050..12945936- (Prunus persica
CTCTCTCTTTCTCTCTCTCTCCATCATCATTCAACAACCTCATGTCAGAA
TCCAAAGAACCCAAAAAAAGAAAACAGTAAAAGAAAAACACCAGAATTAA
TATAAAACATTCCCCTTTCTGCAAAAGGAAAGCTGGATCATCAGAAAAAC
AGAGCAAATTAAAACAAAACATAAATGAGACCGCCACCACCGCCAAGAAG
ATCACTGGAGCTATCAGCAGCATCCCAAGTAGCTGAATTTGGCTTCGTCC
ACCTCTCTCCGTCGCTCTCCTCCCCTCCCCCCACCAGACAAACGACATGC
GTTTCGCACACCTGCCGCTGGTGGCCCTACTCTGGCTCCAAAGAGTTCGA
GGCCAACGCCGCCATGGTCATAATCATCCTCCTCTCCGCCCTCATTTGTG
CTTTGGGCCTCAACGCCGCCATCCGCTGCTTCCTCCGCGGCGGCGGGAGC
GACGACAACAACAGCCCACGGGACAACGATGATAGCAGTCATCTTCCGCA
GACCCAGCAAGAATTGGTTCAAGCTCAGCAGAAGAGCAATGTGGCGGGAG
TTTCGTGCCTGGAGGGGGCGCCGGAACTTTTCTACTCGGCGGAGATGAAG
GCGACGCTGGCGGGGGCGGAGGCGGAGTGCGCCATTTGTTTGTCGGAGTT
TGTGGAGGGGGAAGGGATCAGAGTGCTGGGGAGGTGCAAACATGGCTTCC
ATACTCACTGCATACAGGAGTGGCTGTCTTCTCACTCCTCTTGTCCCACC
TGCCGCCGCACGTGCCTTCCTCAATCGCCGCCTCCATCGCCACCACAACC
CACCACGGACAATAGTTCCCAGCGAATTCCCGCGCCGGAAAGCGGTCCAT
AGAGCTAGCCGCTGTACACAACATGTATGTAACTAGT

Coding sequence (CDS) from alignment at scaffold_5:12945050..12945936-

>ppa011056m ID=ppa011056m; Name=ppa011056m; organism=Prunus persica; type=CDS; length=678bp; location=Sequence derived from: scaffold_5:12945050..12945936- (Prunus persica
ATGAGACCGCCACCACCGCCAAGAAGATCACTGGAGCTATCAGCAGCATC
CCAAGTAGCTGAATTTGGCTTCGTCCACCTCTCTCCGTCGCTCTCCTCCC
CTCCCCCCACCAGACAAACGACATGCGTTTCGCACACCTGCCGCTGGTGG
CCCTACTCTGGCTCCAAAGAGTTCGAGGCCAACGCCGCCATGGTCATAAT
CATCCTCCTCTCCGCCCTCATTTGTGCTTTGGGCCTCAACGCCGCCATCC
GCTGCTTCCTCCGCGGCGGCGGGAGCGACGACAACAACAGCCCACGGGAC
AACGATGATAGCAGTCATCTTCCGCAGACCCAGCAAGAATTGGTTCAAGC
TCAGCAGAAGAGCAATGTGGCGGGAGTTTCGTGCCTGGAGGGGGCGCCGG
AACTTTTCTACTCGGCGGAGATGAAGGCGACGCTGGCGGGGGCGGAGGCG
GAGTGCGCCATTTGTTTGTCGGAGTTTGTGGAGGGGGAAGGGATCAGAGT
GCTGGGGAGGTGCAAACATGGCTTCCATACTCACTGCATACAGGAGTGGC
TGTCTTCTCACTCCTCTTGTCCCACCTGCCGCCGCACGTGCCTTCCTCAA
TCGCCGCCTCCATCGCCACCACAACCCACCACGGACAATAGTTCCCAGCG
AATTCCCGCGCCGGAAAGCGGTCCATAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding