ppa011240m, ppa011240m (mRNA) Prunus persica

Transcript Overview
Nameppa011240m
Unique Nameppa011240m
TypemRNA
OrganismPrunus persica (Peach)
Sequence length691
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
scaffold_4supercontigscaffold_4:28953696..28954386 -Prunus persica Whole Genome v1.0 Assembly & Annotationn/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ppa011240m.gppa011240m.gPrunus persicagene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa011240m.three_prime_UTR.1ppa011240m.three_prime_UTR.1Prunus persicathree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa011240m.CDS.1ppa011240m.CDS.1Prunus persicaCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa011240m.five_prime_UTR.1ppa011240m.five_prime_UTR.1Prunus persicafive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ppa011240mppa011240mPrunus persicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
"Phytozome_pacid17647423"
Homology
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01032684001 (assembled CDS)

HSP 1 Score: 156.762 bits (395), Expect = 6.709e-39
Identity = 80/164 (48.78%), Postives = 103/164 (62.80%), Query Frame = 1 
Query:   40 RLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 531
            RLLL       PN  S   SS         Y  + +FD N+V++L+ LLCALIC+LGLNSI++CALRC               ARLA TG+KK AL+  P   Y +  N+P   T+C ICL +F  G++VR+LPKC+HGFH++CID WL SHSSCP CRH+L+E
Sbjct:   10 RLLLDTDPGASPNVGSRMRSS---------YTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETA--ARLAATGLKKSALRQIPVAVYGSGTNIPA--TDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCPTCRHSLLE 160
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01022306001 (assembled CDS)

HSP 1 Score: 116.316 bits (290), Expect = 1.005e-26
Identity = 58/140 (41.43%), Postives = 85/140 (60.71%), Query Frame = 1 
Query:  151 DANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASS 570
            +++ V++L+ LLCALIC +GL ++ +CA                     AN G+KKK L++ P +++ A ++  G   EC ICL++F  G+ +R+LP+C HGFHV C+D WLSSHSSCP CR  L+ T  +  G  PA S
Sbjct:   25 ESDFVVILAALLCALICVVGLIAVARCA---WLRRGSAGGARASATQPAANKGLKKKILQSLPKLTHDATVS--GKFAECAICLAEFVEGDEIRVLPQCGHGFHVLCVDTWLSSHSSCPSCRQILVVTRCRQCGKFPAIS 159
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01026703001 (assembled CDS)

HSP 1 Score: 85.1149 bits (209), Expect = 2.481e-17
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1 
Query:  292 RLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPP 582
            ++A+TG+++  +K+     Y     +    T+C +CLS+F  GE +RLLPKCNH FH+ CID WL SHSSCP CR ++          + A+  VPP
Sbjct:  104 QVASTGLEEGFIKSITVYKYKKSGGVVE-GTDCSVCLSEFEDGENLRLLPKCNHAFHLPCIDTWLKSHSSCPLCRFDIRSAKILPPELSEATQGVPP 199
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01016661001 (assembled CDS)

HSP 1 Score: 84.3445 bits (207), Expect = 4.232e-17
Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = 1 
Query:  307 GVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP 579
            G+    L + P + +  +    GL  EC +CLS+   GE+ RLLPKCNHGFHV CID W  SHS+CP CR NL+ T      ++  S + P
Sbjct:   97 GLDPSILGSIPVLVFRPEEFKDGL--ECAVCLSELVTGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCR-NLVATSSAAGDYSLESPNYP 184
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01013145001 (assembled CDS)

HSP 1 Score: 84.3445 bits (207), Expect = 4.232e-17
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = 1 
Query:  295 LANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQETIVSIVPLEPEGL 630
            +A TG+ +  +K+     Y     L    T+C +CLS+F   E +RLLPKC+H FHV+CID WL SHS+CP CR N++ T          +   PPV E+ ++  P +   L
Sbjct:   76 VATTGLDEALIKSITLCKYKKGDGLVE-GTDCSVCLSEFEEEESLRLLPKCSHAFHVQCIDTWLKSHSNCPLCRANIVPTT------VSPTQLPPPVMESPLNNEPSQQSQL 180
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01000015001 (assembled CDS)

HSP 1 Score: 83.9593 bits (206), Expect = 5.527e-17
Identity = 49/148 (33.11%), Postives = 74/148 (50.00%), Query Frame = 1 
Query:  100 STNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSII--KCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSA--DLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 531
            S   +DP  Q      F +++ +++ +L+ AL   +G  S+    C+                  +R    G+ +  L+TFPT  YS    L +     EC +CL++F   E +RL+PKC+H FH  CID WL+SH +CP CR NL E
Sbjct:   76 SDTSNDPYQQ----QRFSSSMAIIIVILVAALFL-MGFFSVYIRHCSDSRNGGSIRAAAGAALGRSRRGTRGLDQAVLETFPTFEYSVVKGLKIGKGVLECAVCLNEFEDNETLRLIPKCDHVFHPECIDAWLASHVTCPVCRANLTE 218
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01015682001 (assembled CDS)

HSP 1 Score: 81.2629 bits (199), Expect = 3.582e-16
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 1 
Query:  382 TECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQETIVSIVPLE 618
            TEC +CL++F   E VRLLPKCNH FH+ CID WLSSH++CP CR           G   +++  P  ++++ +  PLE
Sbjct:   81 TECSVCLAEFEEDEAVRLLPKCNHAFHIPCIDTWLSSHTNCPMCR----------AGIVSSTAGAPSPEQSVENSGPLE 149
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01023776001 (assembled CDS)

HSP 1 Score: 80.8777 bits (198), Expect = 4.679e-16
Identity = 49/180 (27.22%), Postives = 86/180 (47.78%), Query Frame = 1 
Query:   19 FVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANV----VMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLA------NTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLI 528
            F N +S    +    +  P+ + + +S + P  P +   GD + ++ V    ++++ +L      S  L+ +++  LR                 +L       + GV +  + T P   Y A +       +C +CL +F A +++RLLPKC+H FH+ CID WL SHS+CP CR +L+
Sbjct:   43 FENMDSVLFQIQEKAFNSPSESPAFLSQSPP-PPANFQSGDYNLNSKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRQPNREPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGAKN-PFDCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLL 220
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01009098001 (assembled CDS)

HSP 1 Score: 80.1073 bits (196), Expect = 7.981e-16
Identity = 43/102 (42.16%), Postives = 57/102 (55.88%), Query Frame = 1 
Query:  295 LANTGVKKKALKTFPTVSYSA----DLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLI-----ETCQKIVGFTPASSS 573
            +A  G+    ++ FPT  YSA     +   GL  EC +CL++F   E +RLLPKCNH FH  CID WL+SH +CP CR NL      + C  +  F P + S
Sbjct:   99 MAARGLNSSDIERFPTFVYSAVKAHKIGKEGL--ECAVCLNEFEDDETLRLLPKCNHVFHSDCIDLWLASHVTCPVCRANLTPKPGEKFCAPVPIFGPETES 198
[Close]
BLAST of ppa011240m vs. Vitis vinifera
Match: GSVIVT01016564001 (assembled CDS)

HSP 1 Score: 79.337 bits (194), Expect = 1.361e-15
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 1 
Query:  337 PTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSV 576
            P+  Y+ D+ L  ++  CV+CL +F  GE +R+LPKC H FHV CID WL SHS+CP CR  +I +   ++G  P   +V
Sbjct:  293 PSFHYTKDIGL--VNATCVVCLCEFKDGEAIRILPKCLHSFHVPCIDMWLCSHSNCPLCRTTVISS-GHVLGHRPEYHTV 369

HSP 2 Score: 78.1814 bits (191), Expect = 3.033e-15
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 1 
Query:  349 YSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCR 516
            Y  D+ L G D  CV+CLS+F  GE +R LP C H FHV CID WL+SH +CP CR
Sbjct:  194 YEKDMELVGDDRMCVVCLSEFEEGEELRTLPHCMHSFHVPCIDMWLNSHMNCPLCR 249

HSP 3 Score: 75.8702 bits (185), Expect = 1.505e-14
Identity = 34/68 (50.00%), Postives = 41/68 (60.29%), Query Frame = 1 
Query:  322 ALKTFPTVSYSADLNLPGLDTE-CVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHN 522
            AL   P   Y   + L G D   C +CLS+F  GE +R LP+C H FHV CID WL SH++CP CR N
Sbjct:   71 ALLMIPAHKYHKGMELAGNDDGVCAVCLSEFEEGEELRTLPECMHSFHVACIDMWLYSHTNCPLCRSN 138
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: B9S872_RICCO (RING-H2 finger protein ATL1L, putative OS=Ricinus communis GN=RCOM_1731140 PE=4 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 2.460e-79
Identity = 151/210 (71.90%), Postives = 168/210 (80.00%), Query Frame = 1 
Query:   25 NFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQETIVSIVPLEPEGLVRNYRGIS 654
            +F SRRLLLH PLY  P TA++P +     + ++ Y G+NSFDANVVMVLSVLLCALICSLGLNSII+CALRC               A LANTGVK+KALKTFPTV+YS DLNLPGLDTEC ICLS+FT GERVRLLPKCNHGFHVRCIDKWLSSHSSCP CRH LIETCQKIVG +  SSS PPVQE+IV+I PLEPE L+R+YRG S
Sbjct:   17 DFYSRRLLLHTPLYHSP-TAAAPPAPGYSQEASEPYTGNNSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSSLVASRSADNSS--AGLANTGVKRKALKTFPTVNYSTDLNLPGLDTECAICLSEFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRHCLIETCQKIVGCSQTSSSDPPVQESIVNIAPLEPEALIRSYRGTS 223
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: A5C4L5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_042413 PE=4 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 2.082e-78
Identity = 150/212 (70.75%), Postives = 170/212 (80.19%), Query Frame = 1 
Query:   25 NFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSS--VPPVQETIVSIVPLEPEGLVRNYRGIS 654
            +F SRRLLLH+PL++ P TAS P +  N HD ++ Y G NSFD NVVMVLSVLLCALICSLGLNSII+CALRC                RLANTGVKKKALKTFPT++YSA LNLPGLDTECVICLSDFT GER+R+LPKCNHGFHVRCIDKWL+SHSSCP CRH LIETCQKI+G + ASSS   PP+QE+++ IVPLEPEG  RNYR +S
Sbjct:   18 DFYSRRLLLHSPLHESPATASPPATG-NSHDSSEPYTGSNSFDTNVVMVLSVLLCALICSLGLNSIIRCALRCSSLVASPGNSPS---TRLANTGVKKKALKTFPTLNYSAGLNLPGLDTECVICLSDFTPGERIRILPKCNHGFHVRCIDKWLNSHSSCPTCRHCLIETCQKIIGCSQASSSETPPPLQESMI-IVPLEPEGFSRNYREVS 224
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: B9GGR9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_752921 PE=4 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 8.189e-75
Identity = 147/214 (68.69%), Postives = 160/214 (74.77%), Query Frame = 1 
Query:   16 FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP---PVQETIVSIVPLEPEGLVRNYRG 648
            F  +F SRRLLLH PLYQ  NTA+ P         T     DNSFDANVVMVLS+LLCALICSLGLNSII+CALRC               A  ANTGVK+KALKTFP V YS DLNLPGLDT+CVICLS+FT GE VRLLPKCNHGFHV+CIDKWLSSHSSCP CRH LIETC+KI G + AS+S P   PVQE IVSI+PLEPEGL+ NYRG
Sbjct:   15 FLGDFYSRRLLLHTPLYQSSNTATPPAPGNTASSET-YTSTDNSFDANVVMVLSILLCALICSLGLNSIIRCALRCSNLVASESAANPSTQA--ANTGVKRKALKTFPIVKYSTDLNLPGLDTQCVICLSEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRHCLIETCKKIAGCSQASTSGPTSLPVQEAIVSILPLEPEGLISNYRG 225
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: B9N9E2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_585933 PE=4 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 6.932e-74
Identity = 150/226 (66.37%), Postives = 172/226 (76.11%), Query Frame = 1 
Query:    1 MSAST--------FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGD-NSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP--PVQETIVSIVPLEPEGLVRNYR 645
            MSAST        F  +F SRRLLLHNPLYQ  NTA+ P    +   P++   G  +SFDANVVMVLSVLLCALICSLGLNSII+CALRC               +  ANTGV ++ALK+FP V+YS+DLNLPGLDTECVICLS+FT GERVRLLPKC+HGFHV+CIDKWLSSHSSCP CRH LIETCQKI+G + AS+S    PVQETIVSI+PLEPEGL+R+YR
Sbjct:    1 MSASTSTTQLFQDFLGDFYSRRLLLHNPLYQSTNTATPPAPGNSA--PSEPSTGTGSSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNIAASESAANPSTQS--ANTGVNRRALKSFPVVNYSSDLNLPGLDTECVICLSEFTPGERVRLLPKCHHGFHVKCIDKWLSSHSSCPTCRHCLIETCQKIIGCSQASTSGTSLPVQETIVSILPLEPEGLIRDYR 222
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: I1JY49_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.56872 PE=4 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 3.560e-70
Identity = 151/226 (66.81%), Postives = 170/226 (75.22%), Query Frame = 1 
Query:   25 NFN-SRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX----ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFT--PASSS--------VPPVQETIVSIV-PLEPEGLVRNYRGIS 654
            NF+ SRRLLLH+P     N +  P +S+  HD T+ Y GD +FDANVVMVLSVLLCALICSLGLNSII+CALRC                   AR+ANTGVKKKALKTFPTVSYSA+LNLP LD+ECVICLS+FT+G++VR+LPKCNH FHVRCIDKWLSSHSSCPKCR  LIETCQKIVG +   ASSS        V  V ETIV+IV PLEPEGLVRNYR +S
Sbjct:   19 NFHYSRRLLLHSPYL---NQSEKPPTSS--HDSTETYLGDGNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNPPAAARVANTGVKKKALKTFPTVSYSAELNLPSLDSECVICLSEFTSGDKVRILPKCNHRFHVRCIDKWLSSHSSCPKCRQCLIETCQKIVGCSTQQASSSQQQQQQQHVLAVPETIVTIVAPLEPEGLVRNYRELS 239
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: C6TAH2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.767e-69
Identity = 150/226 (66.37%), Postives = 169/226 (74.78%), Query Frame = 1 
Query:   25 NFN-SRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX----ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFT--PASSS--------VPPVQETIVSIV-PLEPEGLVRNYRGIS 654
            NF+ SRRLLLH+P     N +  P +S+  HD T+ Y GD +FDANVVMVLSVLLCALICSLGLNSII+CALRC                   AR+ANTGVKKKALKTFPTVSYSA+LNLP LD+ECVICLS+FT+G++VR+LPKCNH FHVRCIDKWLSSHSSCPKCR  LIETCQKIVG +   ASSS        V  V ETIV+IV PLEPE LVRNYR +S
Sbjct:   19 NFHYSRRLLLHSPYL---NQSEKPPTSS--HDSTETYLGDGNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNPPAAARVANTGVKKKALKTFPTVSYSAELNLPSLDSECVICLSEFTSGDKVRILPKCNHRFHVRCIDKWLSSHSSCPKCRQCLIETCQKIVGCSTQQASSSQQQQQQQHVLAVPETIVTIVAPLEPESLVRNYRELS 239
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: I1KBG6_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.19747 PE=4 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 3.014e-69
Identity = 151/223 (67.71%), Postives = 169/223 (75.78%), Query Frame = 1 
Query:   25 NFN-SRRLLLHNPLYQPPNTASSPVSSTNPHDP-TDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX-----ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFT--PASSS---VPPVQETIVSIV-PLEPEGLVRNYRGIS 654
            NF+ SRRLLLH+P      +A  P SS   HD  T+ Y GD +FDANVVMVLSVLLCALICSLGLNSII+CALRC                    AR+ANTGVKKKALKTF TVSYSA+LNLP LD+ECVICLS+FT+GE+VR+LPKCNHGFH+RCIDKWLSSHSSCPKCR  LIETCQKIVG +   ASSS   V  V ETIV+I+ PLEPEGLVRNYR +S
Sbjct:   19 NFHYSRRLLLHSPYLN--QSAKPPRSS---HDSSTETYLGDGNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNNNPPAARVANTGVKKKALKTFTTVSYSAELNLPSLDSECVICLSEFTSGEKVRILPKCNHGFHIRCIDKWLSSHSSCPKCRQCLIETCQKIVGCSTQQASSSQQHVLAVPETIVTIIAPLEPEGLVRNYRELS 236
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: C6T8R0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 8.769e-69
Identity = 150/223 (67.26%), Postives = 168/223 (75.34%), Query Frame = 1 
Query:   25 NFN-SRRLLLHNPLYQPPNTASSPVSSTNPHDP-TDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX-----ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFT--PASSS---VPPVQETIVSIV-PLEPEGLVRNYRGIS 654
            NF+ SRRLLLH+P      +A  P SS   HD  T+ Y GD +FDANVVMVLSVLLC LICSLGLNSII+CALRC                    AR+ANTGVKKKALKTF TVSYSA+LNLP LD+ECVICLS+FT+GE+VR+LPKCNHGFH+RCIDKWLSSHSSCPKCR  LIETCQKIVG +   ASSS   V  V ETIV+I+ PLEPEGLVRNYR +S
Sbjct:   19 NFHYSRRLLLHSPYLN--QSAKPPRSS---HDSSTETYLGDGNFDANVVMVLSVLLCVLICSLGLNSIIRCALRCSNFVVSDSVATNNNNNNPPAARVANTGVKKKALKTFTTVSYSAELNLPSLDSECVICLSEFTSGEKVRILPKCNHGFHIRCIDKWLSSHSSCPKCRQCLIETCQKIVGCSTQQASSSQQHVLAVPETIVTIIAPLEPEGLVRNYRELS 236
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: G7JAX8_MEDTR (Ring-H2 zinc finger protein OS=Medicago truncatula GN=MTR_3g095560 PE=4 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 2.551e-68
Identity = 148/232 (63.79%), Postives = 167/232 (71.98%), Query Frame = 1 
Query:    1 MSASTFFV---------NFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQ--YPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX-ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP-----PVQETIVSIVPLEPEGLVRNYR 645
            M A+T FV         NF+SRRLLLH+      N+A+ P+S T+ HD T +  Y GD +FDANVVMVLSVLLCALICSL LNSII+CAL+C                 R ANTG+KKKALK F TVSYS +L LP LD+ECVICLS+FT G++VRLLPKCNHGFHVRCIDKWLSSHSSCPKCR  LIETC KIVG +  SSS P     PV ETIV+I PLEPEGLVRNYR
Sbjct:    1 MYATTSFVSPLLHELVENFHSRRLLLHSS-----NSANPPIS-TSIHDSTKESSYAGDGNFDANVVMVLSVLLCALICSLCLNSIIRCALKCSNLVVMSGDRSANNIPVRAANTGIKKKALKKFTTVSYSDELKLPSLDSECVICLSEFTNGDKVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCNKIVG-SQGSSSQPQPMLFPVPETIVTIAPLEPEGLVRNYR 225
[Close]
BLAST of ppa011240m vs. ExPASy TrEMBL
Match: I1KTF2_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.53730 PE=4 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 4.812e-67
Identity = 137/215 (63.72%), Postives = 159/215 (73.95%), Query Frame = 1 
Query:   31 NSRRLLLHNPL-YQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXA------RLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQE-TIVSIVPLEPEGLVRNYRGI 651
            NSR+LLL +PL +Q  N+A+SP + +  ++ TD Y     FDANVVM+LSVLLCA+ICSLGLNSIIKC LRC               +      RLANTG+KKKALKTFPTVSYS ++ LPGLDTECVICLS+F  G++VR+LPKCNHGFHVRCIDKWLSSHSSCPKCR  LIETC+KIVG       VPPV E TI+ I PLEPEGL RNYR +
Sbjct:   20 NSRKLLLQDPLLHQSMNSANSPDAMS--YNTTDSYFKGRDFDANVVMILSVLLCAVICSLGLNSIIKCVLRCSNIVINNNDPSSSSVSYNNPSPRLANTGIKKKALKTFPTVSYSTEMKLPGLDTECVICLSEFANGDKVRILPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCKKIVG--SQIQPVPPVPESTIIRIQPLEPEGLERNYREV 230
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL78_ARATH (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.351e-61
Identity = 125/207 (60.39%), Postives = 142/207 (68.60%), Query Frame = 1 
Query:   34 SRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPAS---SSVPPVQETIVSIVPLEPEGLVRNYR 645
            SR+LL H    Q P  A SP            Y GDN+FDANVVMVLSVLLCAL+CSLGLNSII+CALRC                RL NTGVK+KALK+F TVSYS +LNLPGLDTEC ICLS+F A ERV+LLP C+HGFHVRCIDKWLSSHSSCP CRH LI+TC+KI   +  S   S+ PP    I+ I PLEPE  +R +R
Sbjct:   27 SRKLLFHTH-DQSPTPAPSP------------YVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYP-VRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLNSTQPPQDSIILQIAPLEPERWIRWFR 219
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.086e-52
Identity = 108/209 (51.67%), Postives = 137/209 (65.55%), Query Frame = 1 
Query:   16 FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXAR-LANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVG-FTPASS-SVPPVQETIVSIVPLEPEGLV 633
            F   F SR+LLLHNP       A +         P+     +N+   NV+M+LS+L+C +IC LGL+ II+CALR                 R  +N G+KKKAL+ FP VSYS ++NLPGLD ECVICLSDF +GE++RLLPKCNHGFHVRCIDKWL  H +CPKCR+ L+ETCQKI+G F+ A S +  P +  IV+IVPLEP  +V
Sbjct:   17 FLGGFVSRKLLLHNPFDHNTQRAFAVA-------PSPLITHENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILGDFSQADSVTAEPTEIVIVTIVPLEPTEIV 218
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL76_ARATH (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.674e-51
Identity = 106/213 (49.77%), Postives = 136/213 (63.85%), Query Frame = 1 
Query:   16 FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLA-NTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVG-FTPASS-SVPPVQETIVSIVPLEPEGLVRNYR 645
            F  +F +R+LLLH+P         +         P+     +N+   NV+M+LSVL+C +IC LGL+ II+CA R                 R + N G+KKKAL+ FP VSYS ++NLPG+  ECVICLSDF +GE++RLLPKCNHGFHVRCIDKWL  H +CPKCRH L+ETCQKI+G F+ A S +  P +  IV I PLEPEG V  +R
Sbjct:   17 FLGSFVTRKLLLHDPFDHNSLRVFAVA-------PSPLITHENNLKGNVLMLLSVLICGIICCLGLHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILGDFSQADSMASTPTESVIVRIDPLEPEGRVNTFR 222
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL75_ARATH (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.264e-50
Identity = 104/209 (49.76%), Postives = 130/209 (62.20%), Query Frame = 1 
Query:   28 FNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALR-CXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVG-FTPASS-SVPPVQETIVSIVPLEPEGLVRNYR 645
            F SR+LLLHNP       A +         P+     +N+   NV+M+LSVL+C +IC LGL+ II+CA R                    +N G+ KKAL+ FP VSYS ++NLPGL  ECVICLSDF +GE++R+LPKC+HGFHVRCIDKWL  H +CPKCRH L+ETCQKI+G F+ A   +  P    IV I PLEPEG V   R
Sbjct:   22 FVSRKLLLHNPFDHNTQRAFAVA-------PSPLITHENNLSGNVLMLLSVLICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFSQADQVAATPTASVIVRIAPLEPEGRVNILR 223
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.193e-45
Identity = 88/175 (50.29%), Postives = 114/175 (65.14%), Query Frame = 1 
Query:  133 PGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXAR--LANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSV--PPVQETIVSIVPLEPEGLVRNYR 645
            P  N+   NV+M+LS+LLC +ICSLGL+ II+CA                   R    N G+KKKALK  P V+YS ++NLPG+  ECVICLSDF AGE++R+LPKCNHGFH+RCIDKWL+ H +CPKCRH L++TCQK++    A+  V     +   + I PLEPE  V  +R
Sbjct:   43 PDKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVDTCQKVLSDCDAADQVAATATESIDIRISPLEPEARVATFR 217
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.067e-34
Identity = 75/155 (48.39%), Postives = 99/155 (63.87%), Query Frame = 1 
Query:   82 ASSPVSST--NPHDPTDQYPGDN---SFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 531
            A+  +S+T  NP    D    +    S D ++V++L+ LLCALIC+LG+NS+++C LRC               A +A  G+KK+ALK  P  SYS +L +    TEC+ICL DF  GE VR+LPKCNHGFHV+CID WL SHSSCP CR +L+E
Sbjct:   10 ATPTISATDANPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTN-ANVAK-GIKKRALKVIPVDSYSPELKMKA--TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLE 160
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL74_ARATH (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.284e-33
Identity = 70/137 (51.09%), Postives = 88/137 (64.23%), Query Frame = 1 
Query:  124 DQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSY-SADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 531
            D Y  D +FDAN+V++L+ LLCALI +LGLNSI++CA+RC                     G+KK+ LK FP   Y S ++ +    TEC ICL +F  GERVR+LP CNH FH+ CID WL SHSSCP CRH+LIE
Sbjct:   22 DGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAAGTVAD----RAGLKKRELKKFPVAEYGSGEVKIAA--TECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIE 152
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL72_ARATH (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.015e-31
Identity = 75/169 (44.38%), Postives = 92/169 (54.44%), Query Frame = 1 
Query:   40 RLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARL------ANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLI 528
            RLLL      P N    P    N          D  FD N+V++L+ LLCALIC+L LNS ++C LR                A        A TG+KK+ALK  P   Y + + +    TEC+ICL DF  GE+VR+LPKCNHGFHVRCID WL S SSCP CR +L+
Sbjct:    3 RLLLEPQANAPANANPKPKGGIN----------DTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGI-IDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.797e-30
Identity = 67/163 (41.10%), Postives = 93/163 (57.06%), Query Frame = 1 
Query:   94 VSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIET-CQKIVGFTPASSSVP 579
            +   N   P +  P    F++++V++L+VLLCAL C +GL ++ +CA                     AN G+KKK L++ P ++YS D        EC ICL++F AG+ +R+LP+C HGFHV CID WL SHSSCP CR  L+ T C K  G   +SSS P
Sbjct:    9 LQEANSTSPAEASP---PFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGP 168
[Close]
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Match: ATL80_ARATH (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.131e-25
Identity = 64/154 (41.56%), Postives = 91/154 (59.09%), Query Frame = 1 
Query:  139 DNS---FDANVVMVLSVLLCALICSLGLNSIIKCA-LRCXXXXXXXXXXXXXXXAR----LANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNL-IETCQKIVGFTPASSS 573
            DNS    ++++V++L+ LLCALIC LGL ++ +C  LR                 +     AN G+KKK L++ P +++S +        EC ICL++F+AG+ +R+LP+C HGFHV CID WL SHSSCP CR  L +  C K  G   +SSS
Sbjct:   20 DNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSS 173
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT1G49230.1 (| Symbols: | RING/U-box superfamily protein | chr1:18209320-18209979 FORWARD LENGTH=219)

HSP 1 Score: 233.802 bits (595), Expect = 6.295e-62
Identity = 125/207 (60.39%), Postives = 142/207 (68.60%), Query Frame = 1 
Query:   34 SRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPAS---SSVPPVQETIVSIVPLEPEGLVRNYR 645
            SR+LL H    Q P  A SP            Y GDN+FDANVVMVLSVLLCAL+CSLGLNSII+CALRC                RL NTGVK+KALK+F TVSYS +LNLPGLDTEC ICLS+F A ERV+LLP C+HGFHVRCIDKWLSSHSSCP CRH LI+TC+KI   +  S   S+ PP    I+ I PLEPE  +R +R
Sbjct:   27 SRKLLFHTH-DQSPTPAPSP------------YVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYP-VRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLNSTQPPQDSIILQIAPLEPERWIRWFR 219
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT1G49220.1 (| Symbols: | RING/U-box superfamily protein | chr1:18205946-18206701 FORWARD LENGTH=251)

HSP 1 Score: 206.453 bits (524), Expect = 1.076e-53
Identity = 108/209 (51.67%), Postives = 137/209 (65.55%), Query Frame = 1 
Query:   16 FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXAR-LANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVG-FTPASS-SVPPVQETIVSIVPLEPEGLV 633
            F   F SR+LLLHNP       A +         P+     +N+   NV+M+LS+L+C +IC LGL+ II+CALR                 R  +N G+KKKAL+ FP VSYS ++NLPGLD ECVICLSDF +GE++RLLPKCNHGFHVRCIDKWL  H +CPKCR+ L+ETCQKI+G F+ A S +  P +  IV+IVPLEP  +V
Sbjct:   17 FLGGFVSRKLLLHNPFDHNTQRAFAVA-------PSPLITHENNLSGNVMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILGDFSQADSVTAEPTEIVIVTIVPLEPTEIV 218
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT1G49210.1 (| Symbols: | RING/U-box superfamily protein | chr1:18201994-18202671 FORWARD LENGTH=225)

HSP 1 Score: 201.83 bits (512), Expect = 2.651e-52
Identity = 106/213 (49.77%), Postives = 136/213 (63.85%), Query Frame = 1 
Query:   16 FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLA-NTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVG-FTPASS-SVPPVQETIVSIVPLEPEGLVRNYR 645
            F  +F +R+LLLH+P         +         P+     +N+   NV+M+LSVL+C +IC LGL+ II+CA R                 R + N G+KKKAL+ FP VSYS ++NLPG+  ECVICLSDF +GE++RLLPKCNHGFHVRCIDKWL  H +CPKCRH L+ETCQKI+G F+ A S +  P +  IV I PLEPEG V  +R
Sbjct:   17 FLGSFVTRKLLLHDPFDHNSLRVFAVA-------PSPLITHENNLKGNVLMLLSVLICGIICCLGLHYIIRCAFRRSSRFMISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVETCQKILGDFSQADSMASTPTESVIVRIDPLEPEGRVNTFR 222
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT1G49200.1 (| Symbols: | RING/U-box superfamily protein | chr1:18198298-18198978 FORWARD LENGTH=226)

HSP 1 Score: 198.749 bits (504), Expect = 2.244e-51
Identity = 104/209 (49.76%), Postives = 130/209 (62.20%), Query Frame = 1 
Query:   28 FNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALR-CXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVG-FTPASS-SVPPVQETIVSIVPLEPEGLVRNYR 645
            F SR+LLLHNP       A +         P+     +N+   NV+M+LSVL+C +IC LGL+ II+CA R                    +N G+ KKAL+ FP VSYS ++NLPGL  ECVICLSDF +GE++R+LPKC+HGFHVRCIDKWL  H +CPKCRH L+ETCQKI+G F+ A   +  P    IV I PLEPEG V   R
Sbjct:   22 FVSRKLLLHNPFDHNTQRAFAVA-------PSPLITHENNLSGNVLMLLSVLICGIICCLGLHYIIRCAFRRTSSFMISEPIAGLSTPCGSSNKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVETCQKILGDFSQADQVAATPTASVIVRIAPLEPEGRVNILR 223
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT3G18773.1 (| Symbols: | RING/U-box superfamily protein | chr3:6466304-6466966 FORWARD LENGTH=220)

HSP 1 Score: 182.185 bits (461), Expect = 2.174e-46
Identity = 88/175 (50.29%), Postives = 114/175 (65.14%), Query Frame = 1 
Query:  133 PGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXAR--LANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSV--PPVQETIVSIVPLEPEGLVRNYR 645
            P  N+   NV+M+LS+LLC +ICSLGL+ II+CA                   R    N G+KKKALK  P V+YS ++NLPG+  ECVICLSDF AGE++R+LPKCNHGFH+RCIDKWL+ H +CPKCRH L++TCQK++    A+  V     +   + I PLEPE  V  +R
Sbjct:   43 PDKNNLSGNVLMLLSILLCGIICSLGLHYIIRCAFIRSRSFMISDPISIPSTPRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVDTCQKVLSDCDAADQVAATATESIDIRISPLEPEARVATFR 217
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT5G05280.1 (| Symbols: | RING/U-box superfamily protein | chr5:1565509-1566039 REVERSE LENGTH=176)

HSP 1 Score: 144.436 bits (363), Expect = 5.023e-35
Identity = 75/155 (48.39%), Postives = 99/155 (63.87%), Query Frame = 1 
Query:   82 ASSPVSST--NPHDPTDQYPGDN---SFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 531
            A+  +S+T  NP    D    +    S D ++V++L+ LLCALIC+LG+NS+++C LRC               A +A  G+KK+ALK  P  SYS +L +    TEC+ICL DF  GE VR+LPKCNHGFHV+CID WL SHSSCP CR +L+E
Sbjct:   10 ATPTISATDANPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTN-ANVAK-GIKKRALKVIPVDSYSPELKMKA--TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLE 160
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT5G01880.1 (| Symbols: | RING/U-box superfamily protein | chr5:339017-339496 FORWARD LENGTH=159)

HSP 1 Score: 141.739 bits (356), Expect = 3.256e-34
Identity = 70/137 (51.09%), Postives = 88/137 (64.23%), Query Frame = 1 
Query:  124 DQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSY-SADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 531
            D Y  D +FDAN+V++L+ LLCALI +LGLNSI++CA+RC                     G+KK+ LK FP   Y S ++ +    TEC ICL +F  GERVR+LP CNH FH+ CID WL SHSSCP CRH+LIE
Sbjct:   22 DGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAAGTVAD----RAGLKKRELKKFPVAEYGSGEVKIAA--TECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIE 152
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT3G10910.1 (| Symbols: | RING/U-box superfamily protein | chr3:3413068-3413613 REVERSE LENGTH=181)

HSP 1 Score: 134.806 bits (338), Expect = 3.980e-32
Identity = 75/169 (44.38%), Postives = 92/169 (54.44%), Query Frame = 1 
Query:   40 RLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARL------ANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLI 528
            RLLL      P N    P    N          D  FD N+V++L+ LLCALIC+L LNS ++C LR                A        A TG+KK+ALK  P   Y + + +    TEC+ICL DF  GE+VR+LPKCNHGFHVRCID WL S SSCP CR +L+
Sbjct:    3 RLLLEPQANAPANANPKPKGGIN----------DTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGI-IDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT1G76410.1 (| Symbols: ATL8 | RING/U-box superfamily protein | chr1:28668915-28669472 FORWARD LENGTH=185)

HSP 1 Score: 130.954 bits (328), Expect = 5.747e-31
Identity = 67/163 (41.10%), Postives = 93/163 (57.06%), Query Frame = 1 
Query:   94 VSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIET-CQKIVGFTPASSSVP 579
            +   N   P +  P    F++++V++L+VLLCAL C +GL ++ +CA                     AN G+KKK L++ P ++YS D        EC ICL++F AG+ +R+LP+C HGFHV CID WL SHSSCP CR  L+ T C K  G   +SSS P
Sbjct:    9 LQEANSTSPAEASP---PFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGP 168
[Close]
BLAST of ppa011240m vs. TAIR10
Match: AT1G20823.1 (| Symbols: | RING/U-box superfamily protein | chr1:7238880-7239473 FORWARD LENGTH=197)

HSP 1 Score: 116.701 bits (291), Expect = 1.122e-26
Identity = 64/154 (41.56%), Postives = 91/154 (59.09%), Query Frame = 1 
Query:  139 DNS---FDANVVMVLSVLLCALICSLGLNSIIKCA-LRCXXXXXXXXXXXXXXXAR----LANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNL-IETCQKIVGFTPASSS 573
            DNS    ++++V++L+ LLCALIC LGL ++ +C  LR                 +     AN G+KKK L++ P +++S +        EC ICL++F+AG+ +R+LP+C HGFHV CID WL SHSSCP CR  L +  C K  G   +SSS
Sbjct:   20 DNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSS 173
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0001s31710.1 ()

HSP 1 Score: 285.034 bits (728), Expect = 2.706e-77
Identity = 148/214 (69.16%), Postives = 160/214 (74.77%), Query Frame = 1 
Query:   16 FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP---PVQETIVSIVPLEPEGLVRNYRG 648
            F  +F SRRLLLH PLYQ  NTA+ P         T     DNSFDANVVMVLSVLLCALICSLGLNSII+CALRC               A  ANTGVK+KALKTFP V YS DLNLPGLDT+CVICLS+FT GE VRLLPKCNHGFHV+CIDKWLSSHSSCP CRH LIETC+KI G + AS+S P   PVQE IVSI+PLEPEGL+ NYRG
Sbjct:   15 FLGDFYSRRLLLHTPLYQSSNTATPPAPGNTASSET-YTSTDNSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNLVASESAANPSTQA--ANTGVKRKALKTFPIVKYSTDLNLPGLDTQCVICLSEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRHCLIETCKKIAGCSQASTSGPTSLPVQEAIVSILPLEPEGLISNYRG 225
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0019s02620.1 ()

HSP 1 Score: 269.626 bits (688), Expect = 1.176e-72
Identity = 145/219 (66.21%), Postives = 165/219 (75.34%), Query Frame = 1 
Query:    1 MSAST--------FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGD-NSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP--PVQETIVSIVPLEPE 624
            MSAST        F  +F SRRLLLHNPLYQ  NTA+ P    +   P++   G  +SFDANVVMVLSVLLCALICSLGLNSII+CALRC               +  ANTGV ++ALK+FP V+YS+DLNLPGLDTECVICLS+FT GERVRLLPKC+HGFHV+CIDKWLSSHSSCP CRH LIETCQKI+G + AS+S    PVQETIVSI+PLEPE
Sbjct:    1 MSASTSTTQLFQDFLGDFYSRRLLLHNPLYQSTNTATPPAPGNSA--PSEPSTGTGSSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNIAASESAANPSTQS--ANTGVNRRALKSFPVVNYSSDLNLPGLDTECVICLSEFTPGERVRLLPKCHHGFHVKCIDKWLSSHSSCPTCRHCLIETCQKIIGCSQASTSGTSLPVQETIVSIMPLEPE 215
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0001s31720.1 ()

HSP 1 Score: 234.572 bits (597), Expect = 4.193e-62
Identity = 125/218 (57.34%), Postives = 152/218 (69.72%), Query Frame = 1 
Query:   16 FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYP-GDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLN-LPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPP---VQETIVSIVPLEPEGLVRNYRGIS 654
            F  +F+ R+LLLHNPL QP + AS P  S N  DP +    GD  FD NVVMVL VL+CAL+ SLGLNS I+CA+RC                  +N G+KKKAL+TFP  +YS + + LPGLDT+CVIC+S+F  G+RVR+LPKC+HGFHV+CID+WLSSHSSCP CRH L+ETCQKI G + ASSS  P    QE +V+I PLE EGLV NYR  S
Sbjct:   15 FLGDFHPRKLLLHNPLSQPSSIAS-PSPSGNIQDPLNPNANGDKHFDINVVMVLIVLICALLVSLGLNSFIRCAVRCSYLN-----------GNSSNRGIKKKALRTFPIENYSPEKSKLPGLDTQCVICISEFVHGDRVRILPKCSHGFHVKCIDEWLSSHSSCPTCRHCLMETCQKIAGVSQASSSEQPPSVAQERVVNIAPLEREGLVCNYREAS 220
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0019s02610.1 ()

HSP 1 Score: 233.802 bits (595), Expect = 7.153e-62
Identity = 124/214 (57.94%), Postives = 147/214 (68.69%), Query Frame = 1 
Query:   28 FNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTD-QYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSA-DLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSS---VPPVQETIVSIVPLEPEGLVRNYRGIS 654
            F+ R+LLLHNPL        SP+ S+N H P +    GD SF+ NVV+V  VL+CAL  SLGLNS ++CAL C                  +N G+KKKALKTFP V+YSA D  LPGLDTECVIC+S+F  G+RVR+LPKC+H FHVRCID WLSSHSSCP CRH L ETC KI G + ASSS    PP+QE +V+I PLE EGLV NYRG+S
Sbjct:   19 FHLRKLLLHNPL--------SPLPSSNAHHPLNPNATGDKSFNINVVVVFIVLMCALFSSLGLNSFVRCALWCSNVN-----------GNSSNRGIKKKALKTFPVVNYSAKDSKLPGLDTECVICISEFVFGDRVRILPKCSHVFHVRCIDMWLSSHSSCPTCRHCLKETCHKIAGVSQASSSEQPPPPIQERVVNIAPLEREGLVSNYRGVS 213
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0013s09370.1 ()

HSP 1 Score: 162.155 bits (409), Expect = 2.645e-40
Identity = 81/162 (50.00%), Postives = 104/162 (64.20%), Query Frame = 1 
Query:   46 LLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 531
            L H P     +T SS   + N     + Y  D +FD+N+V++L+ LLCALIC+LGLNSI++CALRC               ARLA TG+KK AL+  P + Y     +  + T+C ICL +F  GE+VR+LPKCNHGFHVRCID WL SHSSCP CRH+L+E
Sbjct:    4 LHHRPHRLLLDTESSTRPAANESRTRNTYSSDANFDSNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDQTA--ARLAATGLKKSALRQIPVIIYGVS-GIHTIATDCAICLGEFIDGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPTCRHSLLE 162
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0016s14320.1 ()

HSP 1 Score: 154.836 bits (390), Expect = 4.223e-38
Identity = 81/184 (44.02%), Postives = 109/184 (59.24%), Query Frame = 1 
Query:   76 NTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE------TCQKIVGFTPASSSVPPVQETIVSIV 609
            +T    V+  N +   D Y  + +FD N+V++L+ LLCALI +LGLNSI++C LRC               ARLA TG+KK+ L+  P   Y A  ++    TEC ICL +F  GE+VR+LPKCNHGFHVRCID WL SHSSCP CRH+L+E        Q++ G      + P  Q  + ++V
Sbjct:   10 DTVPLDVAPANGNRTHDSYINETNFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSRFALETTEEAA--ARLAATGLKKRDLRQIPVAIYGAGGSISA--TECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLEHTTDSGAAQEVTGAARPGENDPGRQGNVSTVV 189
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0019s08600.1 ()

HSP 1 Score: 154.836 bits (390), Expect = 4.223e-38
Identity = 85/192 (44.27%), Postives = 113/192 (58.85%), Query Frame = 1 
Query:   16 FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYS-ADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQ 588
            F V+    RLLL         T SS  S+ N     + Y  + +FD N+V++L+ LLCALIC+LGLNSI++CA+RC               A +A TG+KK AL+  P + Y  A ++L  + T+C ICL +F  GE+VR+LP CNHGFHVRCID WL SHSSCP CR +L+E         PASS    ++
Sbjct:    2 FAVHHRPHRLLLE--------TESSTQSAANGSRTRNTYNSEANFDTNMVIILAALLCALICALGLNSIVRCAIRCSRRFTFETRDQTA--AHMAATGLKKSALRRIPVIIYGVAGIHL--IATDCAICLGEFIGGEKVRVLPNCNHGFHVRCIDTWLVSHSSCPTCRQSLLE--------QPASSDATEIE 173
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0001s15930.1 ()

HSP 1 Score: 137.117 bits (344), Expect = 9.112e-33
Identity = 69/177 (38.98%), Postives = 102/177 (57.63%), Query Frame = 1 
Query:   73 PNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQETIVS 603
            P+   SP  ST P     Q P   + D NV+++++ ++CAL+C+LGLNS+++C  +C               +R  N+G+KKK +   PT +Y A    P   + C ICL+DFT G+++R+LPKCNH FH  CIDKWL SHSSCP CRH L            ++ SVP +++ + +
Sbjct:    6 PSPTLSPTMSTPPCQDQSQEP---TMDFNVMVIVAAMICALVCALGLNSMLQCVFQCTRRAVTEPAEWIS--SRRRNSGLKKKEMVALPTSTY-AHQGSPSSASGCAICLADFTDGDKIRVLPKCNHRFHADCIDKWLLSHSSCPTCRHRL-----------KSNESVPSLEQIVTA 165
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0003s07270.1 ()

HSP 1 Score: 134.035 bits (336), Expect = 7.714e-32
Identity = 65/152 (42.76%), Postives = 94/152 (61.84%), Query Frame = 1 
Query:   70 PPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNL 525
            P  T S  VS+ + HD + +     + D NV+++++ +LCA +C+LGLNS+++C  +C               +R  N+G+KK+ +   PT +Y A    P   + C ICL+DFT G+++R+LPKCNH FHV CIDKWL SHSSCP CRH L
Sbjct:    6 PSPTLSPTVSAPSCHDQSQE----PTMDFNVMVIVAAMLCAFVCALGLNSMLQCVFQCTQRTVTETAGWIS--SRRQNSGLKKREMVGLPTSTY-AHQGSPSSTSGCAICLADFTDGDKIRVLPKCNHEFHVDCIDKWLLSHSSCPTCRHRL 150
[Close]
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Match: POPTR_0002s00780.1 ()

HSP 1 Score: 126.331 bits (316), Expect = 1.608e-29
Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 1 
Query:  151 DANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNL-IETCQKIVGFTPASSS 573
            D++ +++L+ LLCALIC LGL ++ +CA                    +AN G+KKK L++ P  ++S D +  G   +C ICL++F+AG+ +R+LP+C HGFHV CID WL SHSSCP CR  L +  CQK  G    SSS
Sbjct:   30 DSDFMVILAALLCALICVLGLIAVARCAWLRRFSSRNPTPPVPPPPPSVANKGLKKKVLRSLPKQTFSEDFS--GKLPDCAICLTEFSAGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCQKCGGLPSGSSS 169
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000853517 (MDP0000853517)

HSP 1 Score: 332.413 bits (851), Expect = 1.989e-91
Identity = 170/213 (79.81%), Postives = 178/213 (83.57%), Query Frame = 1 
Query:   31 NSRRLLLHNPLYQPPNTASSPVSSTNPHDP-TDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX----ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQETIVSIVPLEPEGLVRNYRGIS 654
            NSRRLLL NPLYQPPNTASSPVS+ +   P TDQYPGDNSFDANVVMVLSVLLCALICSLGLN IIKCALRC                   ARLANTGVKKKALKTFPTV+YS +L LPGLDTEC ICLS+FTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVG++  SSS  PVQETIVSI PLEPEG VR+YRGIS
Sbjct:   20 NSRRLLLQNPLYQPPNTASSPVSTNSIDSPSTDQYPGDNSFDANVVMVLSVLLCALICSLGLNFIIKCALRCSSFVSSSESRSAGNNNATSARLANTGVKKKALKTFPTVNYSVELKLPGLDTECAICLSEFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGYSQPSSS-EPVQETIVSIAPLEPEGFVRSYRGIS 231
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000486156 (MDP0000486156)

HSP 1 Score: 161.384 bits (407), Expect = 6.071e-40
Identity = 81/165 (49.09%), Postives = 105/165 (63.64%), Query Frame = 1 
Query:   76 NTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASS 570
            NTA+    S+N +   D +  + +FD N+V++L+ LLCALIC+LGLNSI++CALRC               ARLA TG+KK  L+  P   Y + +N+P   TEC ICL++F  GE+VR+LPKCNHGFHVRCID W  SHSSCP CRH+L+ T          SS
Sbjct:   11 NTAAP---SSNGNRTADSFINEANFDTNMVIILAALLCALICALGLNSIVRCALRCSHRFVLETPEQAA--ARLAATGLKKSHLRQIPIAVYGSGVNIPA--TECPICLTEFEDGEKVRVLPKCNHGFHVRCIDTWFLSHSSCPNCRHSLLSTSSXAAAVAADSS 168
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000220790 (MDP0000220790)

HSP 1 Score: 161.384 bits (407), Expect = 6.071e-40
Identity = 81/165 (49.09%), Postives = 105/165 (63.64%), Query Frame = 1 
Query:   76 NTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASS 570
            NTA+    S+N +   D +  + +FD N+V++L+ LLCALIC+LGLNSI++CALRC               ARLA TG+KK  L+  P   Y + +N+P   TEC ICL++F  GE+VR+LPKCNHGFHVRCID W  SHSSCP CRH+L+ T          SS
Sbjct:   83 NTAAP---SSNGNRTADSFINEANFDTNMVIILAALLCALICALGLNSIVRCALRCSHRFVLETPEQAA--ARLAATGLKKSHLRQIPIAVYGSGVNIPA--TECPICLTEFEDGEKVRVLPKCNHGFHVRCIDTWFLSHSSCPNCRHSLLSTSSTAAAVAADSS 240
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000231890 (MDP0000231890)

HSP 1 Score: 160.999 bits (406), Expect = 7.929e-40
Identity = 82/182 (45.05%), Postives = 112/182 (61.54%), Query Frame = 1 
Query:   49 LHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQET 594
            +H  L       ++P+S+ N     D Y  +  FD N+V++L+ LLCALIC+LGLNS ++CALRC               A+LA TG+KK+ L+  P   Y + +N+P   TEC ICL++F  GE+VR+LPKC+HGFHVRCID WL SHSSCP CRH+L+ T        PA+++V     T
Sbjct:    1 MHRHLLGTEVNTAAPLSNGNR--AADSYVSEAKFDTNMVIILAALLCALICALGLNSFVRCALRCSHRFALETPEQAA--AQLAATGLKKRHLRQIPIAVYGSGVNIPA--TECPICLAEFEDGEKVRVLPKCHHGFHVRCIDTWLLSHSSCPNCRHSLLSTSSA----APAAAAVAAADST 172
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000131315 (MDP0000131315)

HSP 1 Score: 160.999 bits (406), Expect = 7.929e-40
Identity = 82/182 (45.05%), Postives = 112/182 (61.54%), Query Frame = 1 
Query:   49 LHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQET 594
            +H  L       ++P+S+ N     D Y  +  FD N+V++L+ LLCALIC+LGLNS ++CALRC               A+LA TG+KK+ L+  P   Y + +N+P   TEC ICL++F  GE+VR+LPKC+HGFHVRCID WL SHSSCP CRH+L+ T        PA+++V     T
Sbjct:    1 MHRHLLGTEVNTAAPLSNGNR--AADSYVSEAKFDTNMVIILAALLCALICALGLNSFVRCALRCSHRFALETPEQAA--AQLAATGLKKRHLRQIPIAVYGSGVNIPA--TECPICLAEFEDGEKVRVLPKCHHGFHVRCIDTWLLSHSSCPNCRHSLLSTSSA----APAAAAVAAADST 172
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000252590 (MDP0000252590)

HSP 1 Score: 159.844 bits (403), Expect = 1.766e-39
Identity = 84/170 (49.41%), Postives = 105/170 (61.76%), Query Frame = 1 
Query:   40 RLLLHNPLYQP--PNTASSPVSST----NPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 531
            RLLL  P   P  P   S P  +     N     D Y  D +FD N+V++L+ LLCALI +LGLNSI++CALRC               ARLA TG++K+ L+  P V Y    N+P   T+C ICL +FT G++VRLLPKC+HGFHVRCID W  SHSSCP CRH+L+E
Sbjct:   11 RLLLDQPTTPPASPTHGSRPRGTNSDEANGSKARDTYANDANFDTNMVIILAALLCALIFALGLNSIVRCALRCSRRFSSETPDQTA--ARLAATGLRKRTLRQIPVVVYGTGQNIPS--TDCPICLGEFTDGQKVRLLPKCSHGFHVRCIDTWFLSHSSCPICRHSLLE 176
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000247371 (MDP0000247371)

HSP 1 Score: 150.984 bits (380), Expect = 8.205e-37
Identity = 74/151 (49.01%), Postives = 96/151 (63.58%), Query Frame = 1 
Query:   79 TASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 531
            T  +  + +N       Y  + +FD+N+V++L+ LLCALI +LGLNSI++CALRC               ARLA TG+KK  L+  P V Y   LN+    T+C ICL +F  G++VRLLPKCNHGFH RCID W  SHSSCP CRH+L+E
Sbjct:   30 TRGNHANESNGSGTRGAYANEANFDSNMVIILAALLCALIFALGLNSIVRCALRCSRRFSPETPDETA--ARLAVTGLKKSILRRIPIVIYGTGLNIAA--TDCPICLGEFMDGQKVRLLPKCNHGFHARCIDTWFLSHSSCPTCRHSLLE 176
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000124719 (MDP0000124719)

HSP 1 Score: 127.487 bits (319), Expect = 9.715e-30
Identity = 76/187 (40.64%), Postives = 102/187 (54.55%), Query Frame = 1 
Query:   49 LHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKA-------LKTFPTVSYSADLN--LPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPP 582
            L  PL  PP   ++ VS      P   Y G   F+AN  M++ VLL ALI +LGLN+ I+C LR                +R A   V++K+       L+  PTV Y+A++   L G++ EC ICLS+F  GE +R+L +C HGFH +CI KWLSSHSSCP CR     TC   +  +P+ S  PP
Sbjct:   22 LPTPLPSPPTGPTTCVSHACRWWP---YSGSKEFEANAAMIIIVLLSALISALGLNAAIRCFLRGGRGYPSDRENNSVPQSRQALVDVQQKSNVATASCLEAAPTVIYTAEMKAKLAGVEAECAICLSEFVEGEGIRVLRRCKHGFHAQCIQKWLSSHSSCPTCR----RTC---LPQSPSQSPAPP 198
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000210058 (MDP0000210058)

HSP 1 Score: 123.25 bits (308), Expect = 1.832e-28
Identity = 65/160 (40.62%), Postives = 92/160 (57.50%), Query Frame = 1 
Query:  130 YPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKA-------LKTFPTVSYSADLN--LPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPP 582
            Y G   F+AN  M++ VLLCALIC+LGLN+ I+C +R                 + A   V++K+       L+  P V Y+A++   L G++ EC ICLS+F  GE +R++ +C HGFH +CI +WLSSHSSCP CR     TC   +  +P+ S  PP
Sbjct:   46 YSGSKEFEANAAMIIIVLLCALICALGLNAAIRCFVRGGSTNPSDRQNNSAPQRQQALVDVQQKSNVAAAKCLEAAPAVIYTAEMKAKLAGVEAECAICLSEFVEGEGIRVIGRCKHGFHAQCIQEWLSSHSSCPTCR----RTC---LPQSPSQSPPPP 198
[Close]
BLAST of ppa011240m vs. GDR
Match: MDP0000126653 (MDP0000126653)

HSP 1 Score: 122.865 bits (307), Expect = 2.393e-28
Identity = 67/184 (36.41%), Postives = 96/184 (52.17%), Query Frame = 1 
Query:   70 PPNTASSPVSSTNPHDPTDQYPGDNSFDA----NVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSY--SADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQETIVS 603
            PP    SP+S        DQ P  + F      N +++L+ + CA +C+LGLNS++ C  +C               +R  N+G+KKK +   PT +Y  S   +     + C ICL+DF  G+++R+LPKCNH FHV CIDKWL  HSSCP CRH L            +S S+P + E + +
Sbjct:    5 PPPPIPSPISIRTL---CDQDPNHDQFQPTHHLNFMVILAAIFCAFVCALGLNSMLHCVFQCTNRTLTEPVQWVA--SRRLNSGLKKKEMVALPTSTYADSGTTSPSSSSSGCAICLADFCDGDKLRVLPKCNHRFHVACIDKWLLCHSSCPTCRHRL-----------KSSDSMPSLSEIVTT 172
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|255562369|ref|XP_002522191.1| (RING-H2 finger protein ATL1L, putative [Ricinus communis] >gi|223538562|gb|EEF40166.1| RING-H2 finger protein ATL1L, putative [Ricinus communis])

HSP 1 Score: 299.671 bits (766), Expect = 2.271e-79
Identity = 151/210 (71.90%), Postives = 168/210 (80.00%), Query Frame = 1 
Query:   25 NFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQETIVSIVPLEPEGLVRNYRGIS 654
            +F SRRLLLH PLY  P TA++P +     + ++ Y G+NSFDANVVMVLSVLLCALICSLGLNSII+CALRC               A LANTGVK+KALKTFPTV+YS DLNLPGLDTEC ICLS+FT GERVRLLPKCNHGFHVRCIDKWLSSHSSCP CRH LIETCQKIVG +  SSS PPVQE+IV+I PLEPE L+R+YRG S
Sbjct:   17 DFYSRRLLLHTPLYHSP-TAAAPPAPGYSQEASEPYTGNNSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSSLVASRSADNSS--AGLANTGVKRKALKTFPTVNYSTDLNLPGLDTECAICLSEFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRHCLIETCQKIVGCSQTSSSDPPVQESIVNIAPLEPEALIRSYRGTS 223
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|225431583|ref|XP_002282494.1| (PREDICTED: RING-H2 finger protein ATL78 [Vitis vinifera] >gi|147833208|emb|CAN75293.1| hypothetical protein VITISV_042413 [Vitis vinifera])

HSP 1 Score: 296.59 bits (758), Expect = 1.923e-78
Identity = 150/212 (70.75%), Postives = 170/212 (80.19%), Query Frame = 1 
Query:   25 NFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSS--VPPVQETIVSIVPLEPEGLVRNYRGIS 654
            +F SRRLLLH+PL++ P TAS P +  N HD ++ Y G NSFD NVVMVLSVLLCALICSLGLNSII+CALRC                RLANTGVKKKALKTFPT++YSA LNLPGLDTECVICLSDFT GER+R+LPKCNHGFHVRCIDKWL+SHSSCP CRH LIETCQKI+G + ASSS   PP+QE+++ IVPLEPEG  RNYR +S
Sbjct:   18 DFYSRRLLLHSPLHESPATASPPATG-NSHDSSEPYTGSNSFDTNVVMVLSVLLCALICSLGLNSIIRCALRCSSLVASPGNSPS---TRLANTGVKKKALKTFPTLNYSAGLNLPGLDTECVICLSDFTPGERIRILPKCNHGFHVRCIDKWLNSHSSCPTCRHCLIETCQKIIGCSQASSSETPPPLQESMI-IVPLEPEGFSRNYREVS 224
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|224055977|ref|XP_002298709.1| (predicted protein [Populus trichocarpa] >gi|222845967|gb|EEE83514.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 284.648 bits (727), Expect = 7.561e-75
Identity = 147/214 (68.69%), Postives = 160/214 (74.77%), Query Frame = 1 
Query:   16 FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP---PVQETIVSIVPLEPEGLVRNYRG 648
            F  +F SRRLLLH PLYQ  NTA+ P         T     DNSFDANVVMVLS+LLCALICSLGLNSII+CALRC               A  ANTGVK+KALKTFP V YS DLNLPGLDT+CVICLS+FT GE VRLLPKCNHGFHV+CIDKWLSSHSSCP CRH LIETC+KI G + AS+S P   PVQE IVSI+PLEPEGL+ NYRG
Sbjct:   15 FLGDFYSRRLLLHTPLYQSSNTATPPAPGNTASSET-YTSTDNSFDANVVMVLSILLCALICSLGLNSIIRCALRCSNLVASESAANPSTQA--ANTGVKRKALKTFPIVKYSTDLNLPGLDTQCVICLSEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRHCLIETCKKIAGCSQASTSGPTSLPVQEAIVSILPLEPEGLISNYRG 225
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|224116596|ref|XP_002331879.1| (predicted protein [Populus trichocarpa] >gi|222874628|gb|EEF11759.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 281.567 bits (719), Expect = 6.400e-74
Identity = 150/226 (66.37%), Postives = 172/226 (76.11%), Query Frame = 1 
Query:    1 MSAST--------FFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGD-NSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXXARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP--PVQETIVSIVPLEPEGLVRNYR 645
            MSAST        F  +F SRRLLLHNPLYQ  NTA+ P    +   P++   G  +SFDANVVMVLSVLLCALICSLGLNSII+CALRC               +  ANTGV ++ALK+FP V+YS+DLNLPGLDTECVICLS+FT GERVRLLPKC+HGFHV+CIDKWLSSHSSCP CRH LIETCQKI+G + AS+S    PVQETIVSI+PLEPEGL+R+YR
Sbjct:    1 MSASTSTTQLFQDFLGDFYSRRLLLHNPLYQSTNTATPPAPGNSA--PSEPSTGTGSSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNIAASESAANPSTQS--ANTGVNRRALKSFPVVNYSSDLNLPGLDTECVICLSEFTPGERVRLLPKCHHGFHVKCIDKWLSSHSSCPTCRHCLIETCQKIIGCSQASTSGTSLPVQETIVSILPLEPEGLIRDYR 222
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|356508999|ref|XP_003523240.1| (PREDICTED: RING-H2 finger protein ATL78-like [Glycine max])

HSP 1 Score: 269.24 bits (687), Expect = 3.287e-70
Identity = 151/226 (66.81%), Postives = 170/226 (75.22%), Query Frame = 1 
Query:   25 NFN-SRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX----ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFT--PASSS--------VPPVQETIVSIV-PLEPEGLVRNYRGIS 654
            NF+ SRRLLLH+P     N +  P +S+  HD T+ Y GD +FDANVVMVLSVLLCALICSLGLNSII+CALRC                   AR+ANTGVKKKALKTFPTVSYSA+LNLP LD+ECVICLS+FT+G++VR+LPKCNH FHVRCIDKWLSSHSSCPKCR  LIETCQKIVG +   ASSS        V  V ETIV+IV PLEPEGLVRNYR +S
Sbjct:   19 NFHYSRRLLLHSPYL---NQSEKPPTSS--HDSTETYLGDGNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNPPAAARVANTGVKKKALKTFPTVSYSAELNLPSLDSECVICLSEFTSGDKVRILPKCNHRFHVRCIDKWLSSHSSCPKCRQCLIETCQKIVGCSTQQASSSQQQQQQQHVLAVPETIVTIVAPLEPEGLVRNYRELS 239
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|255636983|gb|ACU18824.1| (unknown [Glycine max])

HSP 1 Score: 266.929 bits (681), Expect = 1.631e-69
Identity = 150/226 (66.37%), Postives = 169/226 (74.78%), Query Frame = 1 
Query:   25 NFN-SRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX----ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFT--PASSS--------VPPVQETIVSIV-PLEPEGLVRNYRGIS 654
            NF+ SRRLLLH+P     N +  P +S+  HD T+ Y GD +FDANVVMVLSVLLCALICSLGLNSII+CALRC                   AR+ANTGVKKKALKTFPTVSYSA+LNLP LD+ECVICLS+FT+G++VR+LPKCNH FHVRCIDKWLSSHSSCPKCR  LIETCQKIVG +   ASSS        V  V ETIV+IV PLEPE LVRNYR +S
Sbjct:   19 NFHYSRRLLLHSPYL---NQSEKPPTSS--HDSTETYLGDGNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNPPAAARVANTGVKKKALKTFPTVSYSAELNLPSLDSECVICLSEFTSGDKVRILPKCNHRFHVRCIDKWLSSHSSCPKCRQCLIETCQKIVGCSTQQASSSQQQQQQQHVLAVPETIVTIVAPLEPESLVRNYRELS 239
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|356516339|ref|XP_003526853.1| (PREDICTED: RING-H2 finger protein ATL78-like [Glycine max])

HSP 1 Score: 266.159 bits (679), Expect = 2.783e-69
Identity = 151/223 (67.71%), Postives = 169/223 (75.78%), Query Frame = 1 
Query:   25 NFN-SRRLLLHNPLYQPPNTASSPVSSTNPHDP-TDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX-----ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFT--PASSS---VPPVQETIVSIV-PLEPEGLVRNYRGIS 654
            NF+ SRRLLLH+P      +A  P SS   HD  T+ Y GD +FDANVVMVLSVLLCALICSLGLNSII+CALRC                    AR+ANTGVKKKALKTF TVSYSA+LNLP LD+ECVICLS+FT+GE+VR+LPKCNHGFH+RCIDKWLSSHSSCPKCR  LIETCQKIVG +   ASSS   V  V ETIV+I+ PLEPEGLVRNYR +S
Sbjct:   19 NFHYSRRLLLHSPYLN--QSAKPPRSS---HDSSTETYLGDGNFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNFVVSDSVATNNNNNNPPAARVANTGVKKKALKTFTTVSYSAELNLPSLDSECVICLSEFTSGEKVRILPKCNHGFHIRCIDKWLSSHSSCPKCRQCLIETCQKIVGCSTQQASSSQQHVLAVPETIVTIIAPLEPEGLVRNYRELS 236
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|255635726|gb|ACU18212.1| (unknown [Glycine max])

HSP 1 Score: 264.618 bits (675), Expect = 8.097e-69
Identity = 150/223 (67.26%), Postives = 168/223 (75.34%), Query Frame = 1 
Query:   25 NFN-SRRLLLHNPLYQPPNTASSPVSSTNPHDP-TDQYPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX-----ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFT--PASSS---VPPVQETIVSIV-PLEPEGLVRNYRGIS 654
            NF+ SRRLLLH+P      +A  P SS   HD  T+ Y GD +FDANVVMVLSVLLC LICSLGLNSII+CALRC                    AR+ANTGVKKKALKTF TVSYSA+LNLP LD+ECVICLS+FT+GE+VR+LPKCNHGFH+RCIDKWLSSHSSCPKCR  LIETCQKIVG +   ASSS   V  V ETIV+I+ PLEPEGLVRNYR +S
Sbjct:   19 NFHYSRRLLLHSPYLN--QSAKPPRSS---HDSSTETYLGDGNFDANVVMVLSVLLCVLICSLGLNSIIRCALRCSNFVVSDSVATNNNNNNPPAARVANTGVKKKALKTFTTVSYSAELNLPSLDSECVICLSEFTSGEKVRILPKCNHGFHIRCIDKWLSSHSSCPKCRQCLIETCQKIVGCSTQQASSSQQHVLAVPETIVTIIAPLEPEGLVRNYRELS 236
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|357464535|ref|XP_003602549.1| (Ring-H2 zinc finger protein [Medicago truncatula] >gi|355491597|gb|AES72800.1| Ring-H2 zinc finger protein [Medicago truncatula])

HSP 1 Score: 263.077 bits (671), Expect = 2.356e-68
Identity = 148/232 (63.79%), Postives = 167/232 (71.98%), Query Frame = 1 
Query:    1 MSASTFFV---------NFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQ--YPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX-ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP-----PVQETIVSIVPLEPEGLVRNYR 645
            M A+T FV         NF+SRRLLLH+      N+A+ P+S T+ HD T +  Y GD +FDANVVMVLSVLLCALICSL LNSII+CAL+C                 R ANTG+KKKALK F TVSYS +L LP LD+ECVICLS+FT G++VRLLPKCNHGFHVRCIDKWLSSHSSCPKCR  LIETC KIVG +  SSS P     PV ETIV+I PLEPEGLVRNYR
Sbjct:    1 MYATTSFVSPLLHELVENFHSRRLLLHSS-----NSANPPIS-TSIHDSTKESSYAGDGNFDANVVMVLSVLLCALICSLCLNSIIRCALKCSNLVVMSGDRSANNIPVRAANTGIKKKALKKFTTVSYSDELKLPSLDSECVICLSEFTNGDKVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCNKIVG-SQGSSSQPQPMLFPVPETIVTIAPLEPEGLVRNYR 225
[Close]
BLAST of ppa011240m vs. NCBI nr
Match: gi|388508514|gb|AFK42323.1| (unknown [Medicago truncatula])

HSP 1 Score: 261.151 bits (666), Expect = 8.952e-68
Identity = 148/235 (62.98%), Postives = 168/235 (71.49%), Query Frame = 1 
Query:    1 MSASTFFV---------NFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQ--YPGDNSFDANVVMVLSVLLCALICSLGLNSIIKCALRCXXXXXXXXXXXXXXX-ARLANTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVP-----PVQETIVSIVPLEPEGLVRNYRGIS 654
            M A+T FV         NF+SRRLLLH+      N+A+ P+S T+ HD T +  Y GD +FDANVVMVLSVLLCALICSL LNSII+CAL+C                 R ANTG+KKKALK F TVSYS +L L  LD+ECVICLS+FT G++VRLLPKCNHGFHVRCIDKWLSSHSSCPKCR  LIETC KIVG +  SSS P     PV ETIV+I PLEPEGLVRNYR +S
Sbjct:    1 MYATTSFVSPLLHELVENFHSRRLLLHSS-----NSANPPIS-TSIHDSTKESSYAGDGNFDANVVMVLSVLLCALICSLCLNSIIRCALKCSNLVVMRGDRSANNIPVRAANTGIKKKALKKFTTVSYSDELKLLSLDSECVICLSEFTNGDKVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRQCLIETCNKIVG-SQGSSSQPQPMLFPVPETIVTIAPLEPEGLVRNYREVS 228
The following BLAST results are available for this feature:
BLAST of ppa011240m vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Vitis vinifera)
Total hits: 25
Match NameE-valueIdentityDescription
GSVIVT010326840016.709e-3948.78assembled CDS[more]
GSVIVT010223060011.005e-2641.43assembled CDS[more]
GSVIVT010267030012.481e-1741.24assembled CDS[more]
GSVIVT010166610014.232e-1743.96assembled CDS[more]
GSVIVT010131450014.232e-1738.39assembled CDS[more]
GSVIVT010000150015.527e-1733.11assembled CDS[more]
GSVIVT010156820013.582e-1644.30assembled CDS[more]
GSVIVT010237760014.679e-1627.22assembled CDS[more]
GSVIVT010090980017.981e-1642.16assembled CDS[more]
GSVIVT010165640011.361e-1545.00assembled CDS[more]

Pages

back to top
BLAST of ppa011240m vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9S872_RICCO2.460e-7971.90RING-H2 finger protein ATL1L, putative OS=Ricinus ... [more]
A5C4L5_VITVI2.082e-7870.75Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GGR9_POPTR8.189e-7568.69Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9N9E2_POPTR6.932e-7466.37Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
I1JY49_SOYBN3.560e-7066.81Uncharacterized protein OS=Glycine max GN=Gma.5687... [more]
C6TAH2_SOYBN1.767e-6966.37Putative uncharacterized protein OS=Glycine max PE... [more]
I1KBG6_SOYBN3.014e-6967.71Uncharacterized protein OS=Glycine max GN=Gma.1974... [more]
C6T8R0_SOYBN8.769e-6967.26Putative uncharacterized protein OS=Glycine max PE... [more]
G7JAX8_MEDTR2.551e-6863.79Ring-H2 zinc finger protein OS=Medicago truncatula... [more]
I1KTF2_SOYBN4.812e-6763.72Uncharacterized protein OS=Glycine max GN=Gma.5373... [more]

Pages

back to top
BLAST of ppa011240m vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot)
Total hits: 25
Match NameE-valueIdentityDescription
ATL78_ARATH6.351e-6160.39RING-H2 finger protein ATL78 OS=Arabidopsis thalia... [more]
ATL10_ARATH1.086e-5251.67RING-H2 finger protein ATL10 OS=Arabidopsis thalia... [more]
ATL76_ARATH2.674e-5149.77E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis t... [more]
ATL75_ARATH2.264e-5049.76RING-H2 finger protein ATL75 OS=Arabidopsis thalia... [more]
ATL77_ARATH2.193e-4550.29RING-H2 finger protein ATL77 OS=Arabidopsis thalia... [more]
ATL73_ARATH5.067e-3448.39RING-H2 finger protein ATL73 OS=Arabidopsis thalia... [more]
ATL74_ARATH3.284e-3351.09RING-H2 finger protein ATL74 OS=Arabidopsis thalia... [more]
ATL72_ARATH4.015e-3144.38RING-H2 finger protein ATL72 OS=Arabidopsis thalia... [more]
ATL8_ARATH5.797e-3041.10RING-H2 finger protein ATL8 OS=Arabidopsis thalian... [more]
ATL80_ARATH1.131e-2541.56RING-H2 finger protein ATL80 OS=Arabidopsis thalia... [more]

Pages

back to top
BLAST of ppa011240m vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs TAIR 10)
Total hits: 25
Match NameE-valueIdentityDescription
AT1G49230.16.295e-6260.39| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G49220.11.076e-5351.67| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G49210.12.651e-5249.77| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G49200.12.244e-5149.76| Symbols: | RING/U-box superfamily protein | chr... [more]
AT3G18773.12.174e-4650.29| Symbols: | RING/U-box superfamily protein | chr... [more]
AT5G05280.15.023e-3548.39| Symbols: | RING/U-box superfamily protein | chr... [more]
AT5G01880.13.256e-3451.09| Symbols: | RING/U-box superfamily protein | chr... [more]
AT3G10910.13.980e-3244.38| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G76410.15.747e-3141.10| Symbols: ATL8 | RING/U-box superfamily protein |... [more]
AT1G20823.11.122e-2641.56| Symbols: | RING/U-box superfamily protein | chr... [more]

Pages

back to top
BLAST of ppa011240m vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0)
Total hits: 25
Match NameE-valueIdentityDescription
POPTR_0001s31710.12.706e-7769.16[more]
POPTR_0019s02620.11.176e-7266.21[more]
POPTR_0001s31720.14.193e-6257.34[more]
POPTR_0019s02610.17.153e-6257.94[more]
POPTR_0013s09370.12.645e-4050.00[more]
POPTR_0016s14320.14.223e-3844.02[more]
POPTR_0019s08600.14.223e-3844.27[more]
POPTR_0001s15930.19.112e-3338.98[more]
POPTR_0003s07270.17.714e-3242.76[more]
POPTR_0002s00780.11.608e-2943.66[more]

Pages

back to top
BLAST of ppa011240m vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0)
Total hits: 25
Match NameE-valueIdentityDescription
MDP00008535171.989e-9179.81MDP0000853517[more]
MDP00004861566.071e-4049.09MDP0000486156[more]
MDP00002207906.071e-4049.09MDP0000220790[more]
MDP00002318907.929e-4045.05MDP0000231890[more]
MDP00001313157.929e-4045.05MDP0000131315[more]
MDP00002525901.766e-3949.41MDP0000252590[more]
MDP00002473718.205e-3749.01MDP0000247371[more]
MDP00001247199.715e-3040.64MDP0000124719[more]
MDP00002100581.832e-2840.63MDP0000210058[more]
MDP00001266532.393e-2836.41MDP0000126653[more]

Pages

back to top
BLAST of ppa011240m vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs NCBI nr )
Total hits: 25
Match NameE-valueIdentityDescription
gi|255562369|ref|XP_002522191.1|2.271e-7971.90RING-H2 finger protein ATL1L, putative [Ricinus co... [more]
gi|225431583|ref|XP_002282494.1|1.923e-7870.75PREDICTED: RING-H2 finger protein ATL78 [Vitis vin... [more]
gi|224055977|ref|XP_002298709.1|7.561e-7568.69predicted protein [Populus trichocarpa] >gi|222845... [more]
gi|224116596|ref|XP_002331879.1|6.400e-7466.37predicted protein [Populus trichocarpa] >gi|222874... [more]
gi|356508999|ref|XP_003523240.1|3.287e-7066.81PREDICTED: RING-H2 finger protein ATL78-like [Glyc... [more]
gi|255636983|gb|ACU18824.1|1.631e-6966.37unknown [Glycine max][more]
gi|356516339|ref|XP_003526853.1|2.783e-6967.71PREDICTED: RING-H2 finger protein ATL78-like [Glyc... [more]
gi|255635726|gb|ACU18212.1|8.097e-6967.26unknown [Glycine max][more]
gi|357464535|ref|XP_003602549.1|2.356e-6863.79Ring-H2 zinc finger protein [Medicago truncatula] ... [more]
gi|388508514|gb|AFK42323.1|8.952e-6862.98unknown [Medicago truncatula][more]

Pages

back to top
InterPro
Analysis Name: InterProScan of Prunus persica Whole Genome v1.0
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184Ring fingercoord: 130..171
score: 1.5
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 130..172
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10no descriptioncoord: 128..175
score: 1.1
NoneNo IPR availablePANTHERPTHR22764FAMILY NOT NAMEDcoord: 43..212
score: 1.3
NoneNo IPR availablePFAMPF13639zf-RING_2coord: 129..173
score: 1.4
NoneNo IPR availableSEGsegsegcoord: 82..96
score
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 101..178
score: 2.4
NoneNo IPR availableSEGsegsegcoord: 17..33
score: NAcoord: 42..53
score
NoneNo IPR availableSEGsegsegcoord: 16..37
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>ppa011240m ID=ppa011240m; Name=ppa011240m; organism=Prunus persica; type=mRNA; length=691bp
AAACATTGTCATAACAAAACATGTCTGCTTCTACTTTCTTTGTGAACTTC
AATTCTAGAAGACTTCTCCTACACAACCCACTTTACCAACCACCAAACAC
AGCCTCCTCCCCAGTCTCCTCCACAAACCCACATGACCCAACAGATCAAT
ACCCTGGTGACAACAGCTTTGATGCAAATGTTGTTATGGTCCTCTCAGTC
CTCTTGTGTGCCCTAATTTGCTCACTTGGCCTAAACTCCATCATCAAGTG
TGCTTTGAGATGCTCAAGCTTTGTAGAGTCCAGAAGCAGCAGCAGCAGCA
ACACCTCCGCTAGGTTAGCCAACACAGGAGTGAAGAAAAAAGCCCTAAAA
ACTTTCCCAACAGTGAGTTACTCAGCTGACCTAAATCTGCCTGGGCTGGA
CACAGAGTGTGTGATCTGTCTTTCGGATTTTACAGCCGGTGAGCGTGTTC
GGCTTCTTCCCAAGTGCAACCATGGCTTCCATGTCCGCTGCATTGATAAG
TGGCTGAGCTCGCACTCATCTTGCCCTAAATGCAGGCACAACTTGATCGA
GACATGTCAAAAAATTGTGGGTTTCACCCCAGCTAGCTCCTCAGTCCCAC
CAGTGCAAGAAACCATTGTAAGCATTGTGCCCCTTGAGCCTGAAGGTTTG
GTACGCAATTATAGGGGAATTAGCTAGCTAAGTTTTTATAA
back to top

protein sequence of ppa011240m

>ppa011240m ID=ppa011240m; Name=ppa011240m; organism=Prunus persica; type=polypeptide; length=219bp
MSASTFFVNFNSRRLLLHNPLYQPPNTASSPVSSTNPHDPTDQYPGDNSF
DANVVMVLSVLLCALICSLGLNSIIKCALRCSSFVESRSSSSSNTSARLA
NTGVKKKALKTFPTVSYSADLNLPGLDTECVICLSDFTAGERVRLLPKCN
HGFHVRCIDKWLSSHSSCPKCRHNLIETCQKIVGFTPASSSVPPVQETIV
SIVPLEPEGLVRNYRGIS*
back to top

mRNA from alignment at scaffold_4:28953696..28954386-

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ppa011240m ID=ppa011240m; Name=ppa011240m; organism=Prunus persica; type=mRNA; length=691bp; location=Sequence derived from: scaffold_4:28953696..28954386- (Prunus persica
AAACATTGTCATAACAAAACATGTCTGCTTCTACTTTCTTTGTGAACTTC
AATTCTAGAAGACTTCTCCTACACAACCCACTTTACCAACCACCAAACAC
AGCCTCCTCCCCAGTCTCCTCCACAAACCCACATGACCCAACAGATCAAT
ACCCTGGTGACAACAGCTTTGATGCAAATGTTGTTATGGTCCTCTCAGTC
CTCTTGTGTGCCCTAATTTGCTCACTTGGCCTAAACTCCATCATCAAGTG
TGCTTTGAGATGCTCAAGCTTTGTAGAGTCCAGAAGCAGCAGCAGCAGCA
ACACCTCCGCTAGGTTAGCCAACACAGGAGTGAAGAAAAAAGCCCTAAAA
ACTTTCCCAACAGTGAGTTACTCAGCTGACCTAAATCTGCCTGGGCTGGA
CACAGAGTGTGTGATCTGTCTTTCGGATTTTACAGCCGGTGAGCGTGTTC
GGCTTCTTCCCAAGTGCAACCATGGCTTCCATGTCCGCTGCATTGATAAG
TGGCTGAGCTCGCACTCATCTTGCCCTAAATGCAGGCACAACTTGATCGA
GACATGTCAAAAAATTGTGGGTTTCACCCCAGCTAGCTCCTCAGTCCCAC
CAGTGCAAGAAACCATTGTAAGCATTGTGCCCCTTGAGCCTGAAGGTTTG
GTACGCAATTATAGGGGAATTAGCTAGCTAAGTTTTTATAA
back to top

Coding sequence (CDS) from alignment at scaffold_4:28953696..28954386-

>ppa011240m ID=ppa011240m; Name=ppa011240m; organism=Prunus persica; type=CDS; length=657bp; location=Sequence derived from: scaffold_4:28953696..28954386- (Prunus persica
ATGTCTGCTTCTACTTTCTTTGTGAACTTCAATTCTAGAAGACTTCTCCT
ACACAACCCACTTTACCAACCACCAAACACAGCCTCCTCCCCAGTCTCCT
CCACAAACCCACATGACCCAACAGATCAATACCCTGGTGACAACAGCTTT
GATGCAAATGTTGTTATGGTCCTCTCAGTCCTCTTGTGTGCCCTAATTTG
CTCACTTGGCCTAAACTCCATCATCAAGTGTGCTTTGAGATGCTCAAGCT
TTGTAGAGTCCAGAAGCAGCAGCAGCAGCAACACCTCCGCTAGGTTAGCC
AACACAGGAGTGAAGAAAAAAGCCCTAAAAACTTTCCCAACAGTGAGTTA
CTCAGCTGACCTAAATCTGCCTGGGCTGGACACAGAGTGTGTGATCTGTC
TTTCGGATTTTACAGCCGGTGAGCGTGTTCGGCTTCTTCCCAAGTGCAAC
CATGGCTTCCATGTCCGCTGCATTGATAAGTGGCTGAGCTCGCACTCATC
TTGCCCTAAATGCAGGCACAACTTGATCGAGACATGTCAAAAAATTGTGG
GTTTCACCCCAGCTAGCTCCTCAGTCCCACCAGTGCAAGAAACCATTGTA
AGCATTGTGCCCCTTGAGCCTGAAGGTTTGGTACGCAATTATAGGGGAAT
TAGCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding