ppa012052m, ppa012052m (mRNA) Prunus persica

Transcript Overview
Nameppa012052m
Unique Nameppa012052m
TypemRNA
OrganismPrunus persica (Peach)
Sequence length570
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
scaffold_6supercontigscaffold_6:25092824..25093456 +Prunus persica Whole Genome v1.0 Assembly & Annotationn/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ppa012052m.gppa012052m.gPrunus persicagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa012052m.CDS.1ppa012052m.CDS.1Prunus persicaCDS
ppa012052m.CDS.2ppa012052m.CDS.2Prunus persicaCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa012052m.three_prime_UTR.1ppa012052m.three_prime_UTR.1Prunus persicathree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ppa012052mppa012052mPrunus persicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
"Phytozome_pacid17664175"
Homology
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01032684001 (assembled CDS)

HSP 1 Score: 197.978 bits (502), Expect = 1.989e-51
Identity = 99/159 (62.26%), Postives = 115/159 (72.33%), Query Frame = 1 
Query:    4 HRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKS 417
            HR LL T+P  +P+ G+R   SY +EANFD+NMVIILAAL                      R A ET ++ AARLAATGLKKS LRQIP+AVYGSG  IPAT+CPICLGEFE G+KVRVLP+C+HGFH++CIDTWL+SHSSCP CRHSLLE  HP  S
Sbjct:    9 HRLLLDTDPGASPNVGSRMRSSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETAARLAATGLKKSALRQIPVAVYGSGTNIPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCPTCRHSLLE--HPPAS 165
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01026703001 (assembled CDS)

HSP 1 Score: 94.3597 bits (233), Expect = 3.097e-20
Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = 1 
Query:  163 RLAATGLKKSHLRQIPIAVYG-SGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSL 390
            ++A+TGL++  ++ I +  Y  SG  +  T+C +CL EFEDGE +R+LP+CNH FH+ CIDTWL SHSSCP CR  +
Sbjct:  104 QVASTGLEEGFIKSITVYKYKKSGGVVEGTDCSVCLSEFEDGENLRLLPKCNHAFHLPCIDTWLKSHSSCPLCRFDI 180
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01022306001 (assembled CDS)

HSP 1 Score: 94.3597 bits (233), Expect = 3.097e-20
Identity = 49/104 (47.12%), Postives = 64/104 (61.54%), Query Frame = 1 
Query:  103 VIILAALYRFA-LETPEQAAARLAAT------GLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL 393
            V+ L A+ R A L       AR +AT      GLKK  L+ +P   + + V     EC ICL EF +G+++RVLP+C HGFHV C+DTWL SHSSCP+CR  L+
Sbjct:   42 VVGLIAVARCAWLRRGSAGGARASATQPAANKGLKKKILQSLPKLTHDATVSGKFAECAICLAEFVEGDEIRVLPQCGHGFHVLCVDTWLSSHSSCPSCRQILV 145
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01013145001 (assembled CDS)

HSP 1 Score: 86.6557 bits (213), Expect = 6.457e-18
Identity = 37/78 (47.44%), Postives = 57/78 (73.08%), Query Frame = 1 
Query:  166 LAATGLKKSHLRQIPIAVY--GSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL 393
            +A TGL ++ ++ I +  Y  G G+ +  T+C +CL EFE+ E +R+LP+C+H FHV+CIDTWL SHS+CP CR +++
Sbjct:   76 VATTGLDEALIKSITLCKYKKGDGL-VEGTDCSVCLSEFEEEESLRLLPKCSHAFHVQCIDTWLKSHSNCPLCRANIV 152
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01015682001 (assembled CDS)

HSP 1 Score: 85.8853 bits (211), Expect = 1.101e-17
Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 1 
Query:  166 LAATGLKKSHLRQIPIAVY--GSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE----LHHPKKSTRTNSP 435
            +   GL+ S +  I I  Y  G G+ +  TEC +CL EFE+ E VR+LP+CNH FH+ CIDTWL SH++CP CR  ++        P++S   + P
Sbjct:   53 IRTVGLQPSVISAITICKYKRGDGL-VEGTECSVCLAEFEEDEAVRLLPKCNHAFHIPCIDTWLSSHTNCPMCRAGIVSSTAGAPSPEQSVENSGP 147
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01009096001 (assembled CDS)

HSP 1 Score: 85.5001 bits (210), Expect = 1.439e-17
Identity = 40/95 (42.11%), Postives = 61/95 (64.21%), Query Frame = 1 
Query:  166 LAATGLKKSHLRQIPIAVY--GSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE--LHHPKKSTRTNSPS 438
            +   GL+++ +  I +  Y  G G+ I  TEC +CL EF++ E +R+LP+CNH FH+ CIDTWL SH++CP CR  ++   ++ P +S   NS S
Sbjct:  152 ITTAGLQQAIINSITVCKYKRGEGL-IEGTECSVCLSEFQEDETLRLLPKCNHAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNSRS 245
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01028038001 (assembled CDS)

HSP 1 Score: 85.1149 bits (209), Expect = 1.879e-17
Identity = 38/68 (55.88%), Postives = 43/68 (63.24%), Query Frame = 1 
Query:  178 GLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCR 381
            GL  S L+ +P  VY      P  EC +CL EFED EK RVLP+CNH FH  CID W  SHS+CP CR
Sbjct:   84 GLDVSILKSLPTFVYSKATHGPILECAVCLSEFEDDEKGRVLPKCNHCFHNDCIDMWFHSHSNCPLCR 151
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01023776001 (assembled CDS)

HSP 1 Score: 83.9593 bits (206), Expect = 4.186e-17
Identity = 41/89 (46.07%), Postives = 59/89 (66.29%), Query Frame = 1 
Query:  133 ALETPEQAAARLAATGLKKSHLRQIPIAVYGS--GVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL 393
            AL+   Q    L   G+ +S +  +P+ +Y +  G + P  +C +CL EFE  +K+R+LP+C+H FH+ CIDTWLLSHS+CP CR SLL
Sbjct:  133 ALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGAKNPF-DCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLL 220
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01016661001 (assembled CDS)

HSP 1 Score: 83.5741 bits (205), Expect = 5.466e-17
Identity = 39/86 (45.35%), Postives = 47/86 (54.65%), Query Frame = 1 
Query:  127 RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRH 384
            RF     +  A      GL  S L  IP+ V+         EC +CL E   GEK R+LP+CNHGFHV CID W  SHS+CP CR+
Sbjct:   80 RFVFAPGQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRN 165
[Close]
BLAST of ppa012052m vs. Vitis vinifera
Match: GSVIVT01016564001 (assembled CDS)

HSP 1 Score: 80.4925 bits (197), Expect = 4.628e-16
Identity = 40/90 (44.44%), Postives = 54/90 (60.00%), Query Frame = 1 
Query:  196 LRQIPIAVYGSGVEIPATE---CPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHS-----LLELHHPKKSTRTNSPST 441
            L  IP   Y  G+E+   +   C +CL EFE+GE++R LPEC H FHV CID WL SH++CP CR +     LL+   P+ S+  +  ST
Sbjct:   72 LLMIPAHKYHKGMELAGNDDGVCAVCLSEFEEGEELRTLPECMHSFHVACIDMWLYSHTNCPLCRSNATPSPLLQHGLPESSSGGSITST 161

HSP 2 Score: 77.411 bits (189), Expect = 3.918e-15
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 1 
Query:  205 IPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHH 405
            IP   Y   + +    C +CL EF+DGE +R+LP+C H FHV CID WL SHS+CP CR +++   H
Sbjct:  292 IPSFHYTKDIGLVNATCVVCLCEFKDGEAIRILPKCLHSFHVPCIDMWLCSHSNCPLCRTTVISSGH 358

HSP 3 Score: 71.633 bits (174), Expect = 2.150e-13
Identity = 33/64 (51.56%), Postives = 41/64 (64.06%), Query Frame = 1 
Query:  253 CPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCR-HSLLELHHPKKSTRTNSPST 441
            C +CL EFE+GE++R LP C H FHV CID WL SH +CP CR  S L     ++  R +S ST
Sbjct:  207 CVVCLSEFEEGEELRTLPHCMHSFHVPCIDMWLNSHMNCPLCRLPSSLMFLETQQDLRISSSST 270
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: B9IGS7_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_750033 PE=4 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.704e-52
Identity = 107/154 (69.48%), Postives = 117/154 (75.97%), Query Frame = 1 
Query:    1 MHRHLLGTEP-NTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            MHR +L T P + AP+ GNRT DSYI+E NFD+NMVIILAAL                      RFALET E+AAARLAATGLKK  LRQIP+A+YG+G  I ATECPICLGEF DGEKVRVLP+CNHGFHVRCIDTWLLSHSSCPNCRHSLLE
Sbjct:    1 MHRRMLDTVPLDVAPANGNRTHDSYINETNFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSRFALETTEEAAARLAATGLKKRDLRQIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLE 154
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: A5BMU1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02880 PE=4 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.538e-49
Identity = 99/159 (62.26%), Postives = 115/159 (72.33%), Query Frame = 1 
Query:    4 HRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKS 417
            HR LL T+P  +P+ G+R   SY +EANFD+NMVIILAAL                      R A ET ++ AARLAATGLKKS LRQIP+AVYGSG  IPAT+CPICLGEFE G+KVRVLP+C+HGFH++CIDTWL+SHSSCP CRHSLLE  HP  S
Sbjct:    9 HRLLLDTDPGASPNVGSRMRSSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETAARLAATGLKKSALRQIPVAVYGSGTNIPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCPTCRHSLLE--HPPAS 165
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: B9SRS1_RICCO (RING-H2 finger protein ATL5A, putative OS=Ricinus communis GN=RCOM_1056880 PE=4 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.115e-48
Identity = 113/209 (54.07%), Postives = 127/209 (60.77%), Query Frame = 1 
Query:    1 MHRHLLGTE---PNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTRTNSPSTXXXXXXXXXXXXXXXXXXXSTNEPNQQGRVVIVIEQAS 555
            MHR LL TE   P  +P  G RT DSYI  ANFD+NMVIILAAL                      RF+LETPEQ AARLAA GLKK  LRQIP+AVYG+ V IPATECPICLGEF DGEKVR+LP+CNHGFHVRCIDTWLLSHSSCPNCR SLL     ++ +                            N P +Q  V++V+E AS
Sbjct:    1 MHRRLLETELTVPQPSPD-GTRTRDSYIIGANFDTNMVIILAALLCALLGALGLNSIVRCALRCSSRFSLETPEQTAARLAAKGLKKRELRQIPVAVYGTEVSIPATECPICLGEFLDGEKVRLLPKCNHGFHVRCIDTWLLSHSSCPNCRLSLLXSGAAQEESGRRQ----------------------GENSPGRQRNVIVVVEGAS 186
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: B9S4E7_RICCO (RING-H2 finger protein ATL3C, putative OS=Ricinus communis GN=RCOM_0689750 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 3.037e-46
Identity = 102/163 (62.58%), Postives = 114/163 (69.94%), Query Frame = 1 
Query:    4 HRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGS-GVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTRT 426
            HR LL TE NT P  G+R   SY +EANFD+NMVIILAAL                      RFA ETP++AAARLAATGLKKS LRQIP+ +YG+ G++I AT+C ICLGEF DGEKVRVLP+CNHGFHVRCIDTWL SHSSCP CR SLLE   P  S  T
Sbjct:   12 HRLLLNTESNTPPINGSRIR-SYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDEAAARLAATGLKKSALRQIPVVIYGAAGIQIIATDCAICLGEFSDGEKVRVLPKCNHGFHVRCIDTWLGSHSSCPTCRQSLLEQPAPGNSDAT 173
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: I1L711_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.20209 PE=4 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.727e-45
Identity = 100/160 (62.50%), Postives = 114/160 (71.25%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFG----NRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGS-GVE--IPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            + R LL TE +  PS+G    N T D++IS+ANFD+NMVIILAAL                      RF  ET EQAAARLA TGLK+  L +IP+AVYG+ G E  IPATECPICLGEFE G+KVR+LP+CNHGFHVRCIDTWLLSHSSCPNCRHSLLE
Sbjct:    2 LQRRLLETELSMPPSYGGSGGNNTRDTFISDANFDTNMVIILAALLCALICALGLNSIARCALRCGRRFGDETAEQAAARLAGTGLKRRELSRIPVAVYGAAGGENTIPATECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLE 161
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: I1KB81_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.727e-45
Identity = 100/161 (62.11%), Postives = 111/161 (68.94%), Query Frame = 1 
Query:    1 MHRHLLGTEPNT---APSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSG-VEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHP 408
            +H  LL  + N+   APS  NRT +++  +ANFD+NMVIILAAL                      RFA ETPE+ AARL A GLKKS L QIPI VYGSG   I AT+CPICLGEF DGEKVRVLP+CNHGFHVRCIDTWLLSHSSCPNCR SLLE  HP
Sbjct:    3 LHHRLLLVDTNSSSPAPSSMNRTRETFTGDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPIVVYGSGSASIAATDCPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRQSLLE--HP 161
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: I1N390_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.176e-44
Identity = 96/156 (61.54%), Postives = 111/156 (71.15%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFGN-RTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVE--IPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            M R  L TE +  PS+G   T+D++IS+ANFD+NMVIILAAL                       F  ET EQAAARLA TGLK+  L +IP+AVYG+  E  IPATECPICLGEFE G++VR+LP+CNHGFHVRCIDTWLLSHSSCPNCRHSLLE
Sbjct:    1 MQRRFLETELSMPPSYGGGNTSDTFISDANFDTNMVIILAALLCALICALGLNSIARCALRCGRPFGNETAEQAAARLAGTGLKRRELSRIPVAVYGAAGENTIPATECPICLGEFEKGDRVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLE 156
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: F6GXX0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g01270 PE=4 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 1.080e-43
Identity = 94/147 (63.95%), Postives = 105/147 (71.43%), Query Frame = 1 
Query:    4 HRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY-----RFALETPEQAAARL-----------AATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            HR LL T   +  S GN T ++Y++E NFD+NMVIILAAL         L +  + A R            AATGLKK  LRQIP+AVYG GVEIPATECPICLGEF  GEKVRVLP+CNHGFHVRCIDTWL+SHSSCPNCRHSLLE
Sbjct:   14 HRLLLDTPEPSTMSNGNSTHEAYVNETNFDTNMVIILAALLCALIGALGLNSIVRCAMRCSRRLSPESQGQAATGLKKRALRQIPVAVYGPGVEIPATECPICLGEFVQGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPNCRHSLLE 160
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: I1JYB7_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.53608 PE=4 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.842e-43
Identity = 96/157 (61.15%), Postives = 108/157 (68.79%), Query Frame = 1 
Query:    1 MHRHLLGTEPNT---APSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSG-VEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            +H  LL  + N+   APS  N+T +++  +ANFD+NMVIILAAL                      RFA ETPE+ AARL A GLKKS L QIPI VYGSG   I AT+CPICLGEF DGEKVRVLP+CNH FHVRCIDTWLLSHSSCPNCR SLLE
Sbjct:    3 LHHRLLLVDTNSSSPAPSSMNKTRETFTGDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPIVVYGSGSASIAATDCPICLGEFVDGEKVRVLPKCNHRFHVRCIDTWLLSHSSCPNCRQSLLE 159
[Close]
BLAST of ppa012052m vs. ExPASy TrEMBL
Match: G7KY47_MEDTR (RING-H2 finger protein ATL5H OS=Medicago truncatula GN=MTR_7g073200 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.104e-43
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYG-SGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL 393
            M R  L TE +  PS+ N T+DS+I+  NFD+NMVIILAAL                      R + ETPEQA  RL  TGLKK  L QIP+ VYG +G +IP TECPICLGEFE G+KVR+LP+CNHGFHVRCIDTWL+SHSSCPNCR+SLL
Sbjct:    1 MKRRFLDTEMSMPPSYENNTSDSFINVENFDTNMVIILAALLCALICALGLNTIARCAMRCSRRLSEETPEQATVRLNKTGLKKRELSQIPVTVYGGAGEDIPVTECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLVSHSSCPNCRNSLL 153
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL74_ARATH (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.703e-36
Identity = 79/154 (51.30%), Postives = 94/154 (61.04%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY-------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSG-VEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELH 402
            MHR LL +      + G+   D Y  + NFD+NMVIILAAL                     F L +   A       GLKK  L++ P+A YGSG V+I ATEC ICLGEF DGE+VRVLP CNH FH+ CIDTWL+SHSSCPNCRHSL+E+H
Sbjct:    1 MHRLLLESHGGGNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAAGTVADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIEVH 154
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL72_ARATH (RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.936e-33
Identity = 84/161 (52.17%), Postives = 98/161 (60.87%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFA----LETPEQAAARL----AATGLKKSHLRQIPIAVYGSGV-EIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL 393
            M R LL  + N AP+  N      I++  FD+NMVIILAAL                      RF     +     A A L    AATGLKK  L+QIP+ +YGSG+ ++ ATEC ICLG+FEDGEKVRVLP+CNHGFHVRCIDTWLLS SSCP CR SLL
Sbjct:    1 MGRLLLEPQAN-APANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.553e-27
Identity = 76/170 (44.71%), Postives = 94/170 (55.29%), Query Frame = 1 
Query:    1 MHRHLLGTEPN---TAPSFGNRTADSYISE----ANFDSNMVIILAALY---------------------RFAL-ETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTR 423
            M R LL T+     +A     RT    +S     A+ D++MVIILAAL                      RF   E P    A +A  G+KK  L+ IP+  Y   +++ ATEC ICLG+F +GE VRVLP+CNHGFHV+CIDTWLLSHSSCP CR SLLE   P   +R
Sbjct:    1 MARFLLATQATPTISATDANPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAK-GIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLEHQTPANGSR 169
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL78_ARATH (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.473e-22
Identity = 60/153 (39.22%), Postives = 80/153 (52.29%), Query Frame = 1 
Query:   10 HLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY-------------RFALE----TPEQAAA-----RLAATGLKKSHLRQIPIAVYGSGVEIPA--TECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            H     P  APS        Y+ + NFD+N+V++L+ L              R AL      P +A       RL  TG+K+  L+      Y + + +P   TEC ICL EF   E+V++LP C+HGFHVRCID WL SHSSCP CRH L++
Sbjct:   33 HTHDQSPTPAPS-------PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQ 178
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL76_ARATH (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.795e-20
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 1 
Query:  133 ALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPAT--ECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            +L TP  ++ +    G+KK  LR  P+  Y   + +P    EC ICL +F  GE++R+LP+CNHGFHVRCID WL  H +CP CRH L+E
Sbjct:   97 SLSTPRSSSNK----GIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVE 182
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.342e-19
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:  178 GLKKSHLRQIPIAVYGSGVEIPAT--ECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            G+KK  L+ +P+  Y   + +P    EC ICL +F  GE++RVLP+CNHGFH+RCID WL  H +CP CRH L++
Sbjct:  103 GIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVD 177
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.270e-18
Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 1 
Query:  178 GLKKSHLRQIPIAVYGSGVEIPAT--ECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            G+KK  LR  P+  Y   + +P    EC ICL +F  GE++R+LP+CNHGFHVRCID WL  H +CP CR+ L+E
Sbjct:  108 GIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVE 182
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL75_ARATH (RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.659e-18
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  178 GLKKSHLRQIPIAVYGSGVEIPAT--ECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            G+ K  LR  P+  Y   + +P    EC ICL +F  GE++R+LP+C+HGFHVRCID WL  H +CP CRH L+E
Sbjct:  109 GINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVE 183
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL49_ARATH (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.829e-18
Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 1 
Query:  133 ALETPEQAAARLAATGLKKSHLRQIPIAVYGS--GVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL---ELHHPKKST 420
            AL+   Q    L  +G+ +S +  +P+  Y S  G++I   +CP+CL EFE  +K+R+LP+C+H FHV CIDTWLLSHS+CP CR +LL     HH   S+
Sbjct:   84 ALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSS 184
[Close]
BLAST of ppa012052m vs. ExPASy Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.834e-17
Identity = 39/74 (52.70%), Postives = 53/74 (71.62%), Query Frame = 1 
Query:  166 LAATGLKKSHLRQIPIAVY--GSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCR 381
            +  TGL++S +  I I  Y  G G+ I  T+CP+CL EFE+ E +R+LP+CNH FH+ CIDTWL SH++CP CR
Sbjct:  147 IRTTGLQQSIINSITICNYKRGDGL-IERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT5G01880.1 (| Symbols: | RING/U-box superfamily protein | chr5:339017-339496 FORWARD LENGTH=159)

HSP 1 Score: 150.214 bits (378), Expect = 6.891e-37
Identity = 79/154 (51.30%), Postives = 94/154 (61.04%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY-------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSG-VEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELH 402
            MHR LL +      + G+   D Y  + NFD+NMVIILAAL                     F L +   A       GLKK  L++ P+A YGSG V+I ATEC ICLGEF DGE+VRVLP CNH FH+ CIDTWL+SHSSCPNCRHSL+E+H
Sbjct:    1 MHRLLLESHGGGNETSGSGGGDGYTRDMNFDANMVIILAALLCALILALGLNSILRCAMRCGFGLSSSAAAGTVADRAGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSLIEVH 154
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT3G10910.1 (| Symbols: | RING/U-box superfamily protein | chr3:3413068-3413613 REVERSE LENGTH=181)

HSP 1 Score: 140.198 bits (352), Expect = 7.131e-34
Identity = 84/161 (52.17%), Postives = 98/161 (60.87%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFA----LETPEQAAARL----AATGLKKSHLRQIPIAVYGSGV-EIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL 393
            M R LL  + N AP+  N      I++  FD+NMVIILAAL                      RF     +     A A L    AATGLKK  L+QIP+ +YGSG+ ++ ATEC ICLG+FEDGEKVRVLP+CNHGFHVRCIDTWLLS SSCP CR SLL
Sbjct:    1 MGRLLLEPQAN-APANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLL 160
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT5G05280.1 (| Symbols: | RING/U-box superfamily protein | chr5:1565509-1566039 REVERSE LENGTH=176)

HSP 1 Score: 121.709 bits (304), Expect = 2.624e-28
Identity = 76/170 (44.71%), Postives = 94/170 (55.29%), Query Frame = 1 
Query:    1 MHRHLLGTEPN---TAPSFGNRTADSYISE----ANFDSNMVIILAALY---------------------RFAL-ETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTR 423
            M R LL T+     +A     RT    +S     A+ D++MVIILAAL                      RF   E P    A +A  G+KK  L+ IP+  Y   +++ ATEC ICLG+F +GE VRVLP+CNHGFHV+CIDTWLLSHSSCP CR SLLE   P   +R
Sbjct:    1 MARFLLATQATPTISATDANPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVLRCVLRCTRRFTPNEDPVDTNANVAK-GIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSLLEHQTPANGSR 169
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT1G49230.1 (| Symbols: | RING/U-box superfamily protein | chr1:18209320-18209979 FORWARD LENGTH=219)

HSP 1 Score: 105.145 bits (261), Expect = 2.542e-23
Identity = 60/153 (39.22%), Postives = 80/153 (52.29%), Query Frame = 1 
Query:   10 HLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY-------------RFALE----TPEQAAA-----RLAATGLKKSHLRQIPIAVYGSGVEIPA--TECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            H     P  APS        Y+ + NFD+N+V++L+ L              R AL      P +A       RL  TG+K+  L+      Y + + +P   TEC ICL EF   E+V++LP C+HGFHVRCID WL SHSSCP CRH L++
Sbjct:   33 HTHDQSPTPAPS-------PYVGDNNFDANVVMVLSVLLCALVCSLGLNSIIRCALRCSNLVPSEAGGDNYPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQ 178
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT1G49210.1 (| Symbols: | RING/U-box superfamily protein | chr1:18201994-18202671 FORWARD LENGTH=225)

HSP 1 Score: 96.6709 bits (239), Expect = 9.041e-21
Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 1 
Query:  133 ALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPAT--ECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            +L TP  ++ +    G+KK  LR  P+  Y   + +P    EC ICL +F  GE++R+LP+CNHGFHVRCID WL  H +CP CRH L+E
Sbjct:   97 SLSTPRSSSNK----GIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLVE 182
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT3G18773.1 (| Symbols: | RING/U-box superfamily protein | chr3:6466304-6466966 FORWARD LENGTH=220)

HSP 1 Score: 94.7449 bits (234), Expect = 3.436e-20
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:  178 GLKKSHLRQIPIAVYGSGVEIPAT--ECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            G+KK  L+ +P+  Y   + +P    EC ICL +F  GE++RVLP+CNHGFH+RCID WL  H +CP CRH L++
Sbjct:  103 GIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCRHCLVD 177
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT1G49220.1 (| Symbols: | RING/U-box superfamily protein | chr1:18205946-18206701 FORWARD LENGTH=251)

HSP 1 Score: 92.8189 bits (229), Expect = 1.306e-19
Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 1 
Query:  178 GLKKSHLRQIPIAVYGSGVEIPAT--ECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            G+KK  LR  P+  Y   + +P    EC ICL +F  GE++R+LP+CNHGFHVRCID WL  H +CP CR+ L+E
Sbjct:  108 GIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVE 182
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT1G49200.1 (| Symbols: | RING/U-box superfamily protein | chr1:18198298-18198978 FORWARD LENGTH=226)

HSP 1 Score: 92.4337 bits (228), Expect = 1.705e-19
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  178 GLKKSHLRQIPIAVYGSGVEIPAT--ECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            G+ K  LR  P+  Y   + +P    EC ICL +F  GE++R+LP+C+HGFHVRCID WL  H +CP CRH L+E
Sbjct:  109 GINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCRHCLVE 183
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT2G18650.1 (| Symbols: MEE16 | RING/U-box superfamily protein | chr2:8086860-8088131 REVERSE LENGTH=423)

HSP 1 Score: 91.6633 bits (226), Expect = 2.908e-19
Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 1 
Query:  133 ALETPEQAAARLAATGLKKSHLRQIPIAVYGS--GVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL---ELHHPKKST 420
            AL+   Q    L  +G+ +S +  +P+  Y S  G++I   +CP+CL EFE  +K+R+LP+C+H FHV CIDTWLLSHS+CP CR +LL     HH   S+
Sbjct:   84 ALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSS 184
[Close]
BLAST of ppa012052m vs. TAIR10
Match: AT1G72220.1 (| Symbols: | RING/U-box superfamily protein | chr1:27184388-27185629 REVERSE LENGTH=413)

HSP 1 Score: 88.9669 bits (219), Expect = 1.885e-18
Identity = 39/74 (52.70%), Postives = 53/74 (71.62%), Query Frame = 1 
Query:  166 LAATGLKKSHLRQIPIAVY--GSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCR 381
            +  TGL++S +  I I  Y  G G+ I  T+CP+CL EFE+ E +R+LP+CNH FH+ CIDTWL SH++CP CR
Sbjct:  147 IRTTGLQQSIINSITICNYKRGDGL-IERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0016s14320.1 ()

HSP 1 Score: 208.764 bits (530), Expect = 1.851e-54
Identity = 107/154 (69.48%), Postives = 117/154 (75.97%), Query Frame = 1 
Query:    1 MHRHLLGTEP-NTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            MHR +L T P + AP+ GNRT DSYI+E NFD+NMVIILAAL                      RFALET E+AAARLAATGLKK  LRQIP+A+YG+G  I ATECPICLGEF DGEKVRVLP+CNHGFHVRCIDTWLLSHSSCPNCRHSLLE
Sbjct:    4 MHRRMLDTVPLDVAPANGNRTHDSYINETNFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSRFALETTEEAAARLAATGLKKRDLRQIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLE 157
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0013s09370.1 ()

HSP 1 Score: 187.578 bits (475), Expect = 4.417e-48
Identity = 99/154 (64.29%), Postives = 112/154 (72.73%), Query Frame = 1 
Query:    4 HRHLLGTEPNTAPSFG-NRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYG-SGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            HR LL TE +T P+   +RT ++Y S+ANFDSNMVIILAAL                      RFA ETP+Q AARLAATGLKKS LRQIP+ +YG SG+   AT+C ICLGEF DGEKVRVLP+CNHGFHVRCIDTWL+SHSSCP CRHSLLE
Sbjct:    9 HRLLLDTESSTRPAANESRTRNTYSSDANFDSNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDQTAARLAATGLKKSALRQIPVIIYGVSGIHTIATDCAICLGEFIDGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPTCRHSLLE 162
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0019s08600.1 ()

HSP 1 Score: 171.014 bits (432), Expect = 4.278e-43
Identity = 91/154 (59.09%), Postives = 108/154 (70.13%), Query Frame = 1 
Query:    4 HRHLLGTEPNT-APSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYG-SGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            HR LL TE +T + + G+RT ++Y SEANFD+NMVIILAAL                      RF  ET +Q AA +AATGLKKS LR+IP+ +YG +G+ + AT+C ICLGEF  GEKVRVLP CNHGFHVRCIDTWL+SHSSCP CR SLLE
Sbjct:    9 HRLLLETESSTQSAANGSRTRNTYNSEANFDTNMVIILAALLCALICALGLNSIVRCAIRCSRRFTFETRDQTAAHMAATGLKKSALRRIPVIIYGVAGIHLIATDCAICLGEFIGGEKVRVLPNCNHGFHVRCIDTWLVSHSSCPTCRQSLLE 162
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0019s15050.1 ()

HSP 1 Score: 134.806 bits (338), Expect = 3.397e-32
Identity = 71/133 (53.38%), Postives = 86/133 (64.66%), Query Frame = 1 
Query:   64 DSYISEANFDSNMVIILAAL---------------------YRFALETPEQAAARLAA---TGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSL 390
            +S I  ++ +SNMVI+LAAL                     YR   ETP+QAA+RLAA   TGL KS L QIP+  Y  G+ I  T+C ICLGEF +GEKVRVLP+C+HGFHV+CID WLL HSSCP CR +L
Sbjct:   14 NSSILNSDENSNMVIVLAALLFAFLCALGIKSIARCAIRCGYRIGFETPQQAASRLAAATNTGLMKSALGQIPVVTYEPGLNIQVTDCTICLGEFSEGEKVRVLPKCSHGFHVKCIDKWLLLHSSCPLCRQTL 146
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0013s15290.1 ()

HSP 1 Score: 134.035 bits (336), Expect = 5.795e-32
Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = 1 
Query:   49 GNRTADSYI--SEANFDSNMVIILAAL---------------------YRFALETPEQAAARLAA---TGLKKSHLRQIPIAVYGSGVEIP-ATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL 393
            G+  +  YI  +  NFD  +V++L AL                     YR   ETP+QAA+RLAA   T LKKS L QIP+  Y SG+ I  +T+CPICLGEF +GEKVRVLP+C+HGFHV+CID WLL HSSCP CR +LL
Sbjct:    7 GDGNSSDYILGTGTNFDGKVVMVLVALLFALVCAFGINSIARCATRNGYRIGFETPQQAASRLAAATNTELKKSALGQIPVVPYKSGLHIQVSTDCPICLGEFSEGEKVRVLPQCSHGFHVKCIDRWLLLHSSCPLCRQALL 148
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0001s31710.1 ()

HSP 1 Score: 112.079 bits (279), Expect = 2.358e-25
Identity = 63/146 (43.15%), Postives = 85/146 (58.22%), Query Frame = 1 
Query:   34 TAPSFGNR-TADSYISEAN-FDSNMVIILAALY-------------RFALETPEQAAARLAA--------TGLKKSHLRQIPIAVYGSGVEIPA--TECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            T P+ GN  ++++Y S  N FD+N+V++L+ L              R AL      A+  AA        TG+K+  L+  PI  Y + + +P   T+C ICL EF  GE VR+LP+CNHGFHV+CID WL SHSSCP CRH L+E
Sbjct:   38 TPPAPGNTASSETYTSTDNSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNLVASESAANPSTQAANTGVKRKALKTFPIVKYSTDLNLPGLDTQCVICLSEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRHCLIE 183
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0019s02620.1 ()

HSP 1 Score: 109.383 bits (272), Expect = 1.529e-24
Identity = 62/150 (41.33%), Postives = 84/150 (56.00%), Query Frame = 1 
Query:   22 TEPNTAPSFGNRTAD--SYISEANFDSNMVIILAALY-------------RFALETPEQAAARLAA--------TGLKKSHLRQIPIAVYGSGVEIPA--TECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            T   T P+ GN      S  + ++FD+N+V++L+ L              R AL     AA+  AA        TG+ +  L+  P+  Y S + +P   TEC ICL EF  GE+VR+LP+C+HGFHV+CID WL SHSSCP CRH L+E
Sbjct:   33 TNTATPPAPGNSAPSEPSTGTGSSFDANVVMVLSVLLCALICSLGLNSIIRCALRCSNIAASESAANPSTQSANTGVNRRALKSFPVVNYSSDLNLPGLDTECVICLSEFTPGERVRLLPKCHHGFHVKCIDKWLSSHSSCPTCRHCLIE 182
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0001s15930.1 ()

HSP 1 Score: 101.679 bits (252), Expect = 3.187e-22
Identity = 53/147 (36.05%), Postives = 72/147 (48.98%), Query Frame = 1 
Query:   16 LGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYG-SGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSL 390
            +   P  +P+           E   D N+++I+AA+                      R   E  E  ++R   +GLKK  +  +P + Y   G    A+ C ICL +F DG+K+RVLP+CNH FH  CID WLLSHSSCP CRH L
Sbjct:    4 ISPSPTLSPTMSTPPCQDQSQEPTMDFNVMVIVAAMICALVCALGLNSMLQCVFQCTRRAVTEPAEWISSRRRNSGLKKKEMVALPTSTYAHQGSPSSASGCAICLADFTDGDKIRVLPKCNHRFHADCIDKWLLSHSSCPTCRHRL 150
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0003s07270.1 ()

HSP 1 Score: 99.7525 bits (247), Expect = 1.211e-21
Identity = 53/147 (36.05%), Postives = 73/147 (49.66%), Query Frame = 1 
Query:   16 LGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYG-SGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSL 390
            +   P  +P+    +      E   D N+++I+AA+                      R   ET    ++R   +GLKK  +  +P + Y   G     + C ICL +F DG+K+RVLP+CNH FHV CID WLLSHSSCP CRH L
Sbjct:    4 ISPSPTLSPTVSAPSCHDQSQEPTMDFNVMVIVAAMLCAFVCALGLNSMLQCVFQCTQRTVTETAGWISSRRQNSGLKKREMVGLPTSTYAHQGSPSSTSGCAICLADFTDGDKIRVLPKCNHEFHVDCIDKWLLSHSSCPTCRHRL 150
[Close]
BLAST of ppa012052m vs. Populus trichicarpa v2.0
Match: POPTR_0001s31720.1 ()

HSP 1 Score: 97.8265 bits (242), Expect = 4.602e-21
Identity = 59/151 (39.07%), Postives = 79/151 (52.32%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFGNRTADSYISEAN----FDSNMVIIL-----AALYRFALETPEQAAARLAAT-------GLKKSHLRQIPIAVYG-SGVEIPA--TECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            +H  L       +PS      D     AN    FD N+V++L     A L    L +  + A R +         G+KK  LR  PI  Y     ++P   T+C IC+ EF  G++VR+LP+C+HGFHV+CID WL SHSSCP CRH L+E
Sbjct:   26 LHNPLSQPSSIASPSPSGNIQDPLNPNANGDKHFDINVVMVLIVLICALLVSLGLNSFIRCAVRCSYLNGNSSNRGIKKKALRTFPIENYSPEKSKLPGLDTQCVICISEFVHGDRVRILPKCSHGFHVKCIDEWLSSHSSCPTCRHCLME 176
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000486156 (MDP0000486156)

HSP 1 Score: 238.039 bits (606), Expect = 3.813e-63
Identity = 132/209 (63.16%), Postives = 143/209 (68.42%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAP--SFGNRTADSYISEANFDSNMVIILAAL---------------------YRFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTRTNSPSTXXXXXXXXXXXXXXXXXXXSTNEPNQQ-GRVVIVIEQAS 555
            MHRHLLGT  NTA   S GNRTADS+I+EANFD+NMVIILAAL                     +RF LETPEQAAARLAATGLKKSHLRQIPIAVYGSGV IPATECPICL EFEDGEKVRVLP+CNHGFHVRCIDTW LSHSSCPNCRHSLL          T+S +                    + NE +QQ GRVV+V+EQ S
Sbjct:    1 MHRHLLGTALNTAAPSSNGNRTADSFINEANFDTNMVIILAALLCALICALGLNSIVRCALRCSHRFVLETPEQAAARLAATGLKKSHLRQIPIAVYGSGVNIPATECPICLTEFEDGEKVRVLPKCNHGFHVRCIDTWFLSHSSCPNCRHSLLS---------TSSXAAAVAADSSGEAAAAEEESPAAANESSQQGGRVVVVVEQGS 200
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000220790 (MDP0000220790)

HSP 1 Score: 238.039 bits (606), Expect = 3.813e-63
Identity = 132/209 (63.16%), Postives = 143/209 (68.42%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAP--SFGNRTADSYISEANFDSNMVIILAAL---------------------YRFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTRTNSPSTXXXXXXXXXXXXXXXXXXXSTNEPNQQ-GRVVIVIEQAS 555
            MHRHLLGT  NTA   S GNRTADS+I+EANFD+NMVIILAAL                     +RF LETPEQAAARLAATGLKKSHLRQIPIAVYGSGV IPATECPICL EFEDGEKVRVLP+CNHGFHVRCIDTW LSHSSCPNCRHSLL          T+S +                    + NE +QQ GRVV+V+EQ S
Sbjct:   73 MHRHLLGTALNTAAPSSNGNRTADSFINEANFDTNMVIILAALLCALICALGLNSIVRCALRCSHRFVLETPEQAAARLAATGLKKSHLRQIPIAVYGSGVNIPATECPICLTEFEDGEKVRVLPKCNHGFHVRCIDTWFLSHSSCPNCRHSLLS---------TSSTAAAVAADSSGEAAAAEEESPAAANESSQQGGRVVVVVEQGS 272
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000231890 (MDP0000231890)

HSP 1 Score: 234.187 bits (596), Expect = 5.506e-62
Identity = 133/210 (63.33%), Postives = 144/210 (68.57%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAP--SFGNRTADSYISEANFDSNMVIILAAL---------------------YRFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTRTNSPSTXXXXXXXXXXXXXXXXXXXS---TNEPNQQ-GRVVIVIEQ 549
            MHRHLLGTE NTA   S GNR ADSY+SEA FD+NMVIILAAL                     +RFALETPEQAAA+LAATGLKK HLRQIPIAVYGSGV IPATECPICL EFEDGEKVRVLP+C+HGFHVRCIDTWLLSHSSCPNCRHSLL       ST + +P+                    S   TNE +QQ GRVV+V EQ
Sbjct:    1 MHRHLLGTEVNTAAPLSNGNRAADSYVSEAKFDTNMVIILAALLCALICALGLNSFVRCALRCSHRFALETPEQAAAQLAATGLKKRHLRQIPIAVYGSGVNIPATECPICLAEFEDGEKVRVLPKCHHGFHVRCIDTWLLSHSSCPNCRHSLL-------STSSAAPAAAAVAAADSTQEANAAAEGSSAAATNESSQQGGRVVVVDEQ 203
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000131315 (MDP0000131315)

HSP 1 Score: 234.187 bits (596), Expect = 5.506e-62
Identity = 133/210 (63.33%), Postives = 144/210 (68.57%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAP--SFGNRTADSYISEANFDSNMVIILAAL---------------------YRFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTRTNSPSTXXXXXXXXXXXXXXXXXXXS---TNEPNQQ-GRVVIVIEQ 549
            MHRHLLGTE NTA   S GNR ADSY+SEA FD+NMVIILAAL                     +RFALETPEQAAA+LAATGLKK HLRQIPIAVYGSGV IPATECPICL EFEDGEKVRVLP+C+HGFHVRCIDTWLLSHSSCPNCRHSLL       ST + +P+                    S   TNE +QQ GRVV+V EQ
Sbjct:    1 MHRHLLGTEVNTAAPLSNGNRAADSYVSEAKFDTNMVIILAALLCALICALGLNSFVRCALRCSHRFALETPEQAAAQLAATGLKKRHLRQIPIAVYGSGVNIPATECPICLAEFEDGEKVRVLPKCHHGFHVRCIDTWLLSHSSCPNCRHSLL-------STSSAAPAAAAVAAADSTQEANAAAEGSSAAATNESSQQGGRVVVVDEQ 203
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000252590 (MDP0000252590)

HSP 1 Score: 177.948 bits (450), Expect = 4.683e-45
Identity = 86/143 (60.14%), Postives = 105/143 (73.43%), Query Frame = 1 
Query:   31 NTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            N+  + G++  D+Y ++ANFD+NMVIILAAL                      RF+ ETP+Q AARLAATGL+K  LRQIP+ VYG+G  IP+T+CPICLGEF DG+KVR+LP+C+HGFHVRCIDTW LSHSSCP CRHSLLE
Sbjct:   34 NSDEANGSKARDTYANDANFDTNMVIILAALLCALIFALGLNSIVRCALRCSRRFSSETPDQTAARLAATGLRKRTLRQIPVVVYGTGQNIPSTDCPICLGEFTDGQKVRLLPKCSHGFHVRCIDTWFLSHSSCPICRHSLLE 176
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000247371 (MDP0000247371)

HSP 1 Score: 176.022 bits (445), Expect = 1.779e-44
Identity = 87/139 (62.59%), Postives = 101/139 (72.66%), Query Frame = 1 
Query:   43 SFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            S G+ T  +Y +EANFDSNMVIILAAL                      RF+ ETP++ AARLA TGLKKS LR+IPI +YG+G+ I AT+CPICLGEF DG+KVR+LP+CNHGFH RCIDTW LSHSSCP CRHSLLE
Sbjct:   38 SNGSGTRGAYANEANFDSNMVIILAALLCALIFALGLNSIVRCALRCSRRFSPETPDETAARLAVTGLKKSILRRIPIVIYGTGLNIAATDCPICLGEFMDGQKVRLLPKCNHGFHARCIDTWFLSHSSCPTCRHSLLE 176
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000853517 (MDP0000853517)

HSP 1 Score: 115.931 bits (289), Expect = 2.185e-26
Identity = 65/158 (41.14%), Postives = 87/158 (55.06%), Query Frame = 1 
Query:   28 PNTAPS------FGNRTADSYISEANFDSNMVIILAALY--------------------RFALETPEQAA-------ARLAATGLKKSHLRQIPIAVYGSGVEIPA--TECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            PNTA S        + + D Y  + +FD+N+V++L+ L                      F   +  ++A       ARLA TG+KK  L+  P   Y   +++P   TEC ICL EF  GE+VR+LP+CNHGFHVRCID WL SHSSCP CRH+L+E
Sbjct:   34 PNTASSPVSTNSIDSPSTDQYPGDNSFDANVVMVLSVLLCALICSLGLNFIIKCALRCSSFVSSSESRSAGNNNATSARLANTGVKKKALKTFPTVNYSVELKLPGLDTECAICLSEFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRHNLIE 191
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000803911 (MDP0000803911)

HSP 1 Score: 98.9821 bits (245), Expect = 2.764e-21
Identity = 47/92 (51.09%), Postives = 59/92 (64.13%), Query Frame = 1 
Query:  127 RFALETPEQAAARLAATGLKKSHLRQIPIAVYG-SGVEIPATE---CPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSL 390
            R  +E  E  A+R   +GLKK  +  +P + Y  SG   P++    C ICL +F DG+K+RVLP+CNH FHV CID WLL HSSCP CRH L
Sbjct:   72 RAVIEPVEWVASRRLNSGLKKKEMVALPTSTYADSGTTSPSSSSSGCAICLADFSDGDKLRVLPKCNHRFHVACIDKWLLCHSSCPTCRHRL 163
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000126653 (MDP0000126653)

HSP 1 Score: 96.2857 bits (238), Expect = 1.792e-20
Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 1 
Query:   67 SYISEANFDSNMVIILAALYRFALETPEQAAARLAATGLKKSHLRQIPIAVYG-SGVEIPATE---CPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSL 390
            +++     +S +  +     R   E  +  A+R   +GLKK  +  +P + Y  SG   P++    C ICL +F DG+K+RVLP+CNH FHV CID WLL HSSCP CRH L
Sbjct:   46 AFVCALGLNSMLHCVFQCTNRTLTEPVQWVASRRLNSGLKKKEMVALPTSTYADSGTTSPSSSSSGCAICLADFCDGDKLRVLPKCNHRFHVACIDKWLLCHSSCPTCRHRL 157
[Close]
BLAST of ppa012052m vs. GDR
Match: MDP0000166108 (MDP0000166108)

HSP 1 Score: 96.2857 bits (238), Expect = 1.792e-20
Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 1 
Query:   67 SYISEANFDSNMVIILAALYRFALETPEQAAARLAATGLKKSHLRQIPIAVYG-SGVEIPATE---CPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSL 390
            +++     +S +  +     R   E  +  A+R   +GLKK  +  +P + Y  SG   P++    C ICL +F DG+K+RVLP+CNH FHV CID WLL HSSCP CRH L
Sbjct:   46 AFVCALGLNSMLHCVFQCTNRTLTEPVQWVASRRLNSGLKKKEMVALPTSTYADSGTTSPSSSSSGCAICLADFCDGDKLRVLPKCNHRFHVACIDKWLLCHSSCPTCRHRL 157
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|224139358|ref|XP_002323073.1| (predicted protein [Populus trichocarpa] >gi|222867703|gb|EEF04834.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 208.764 bits (530), Expect = 3.438e-52
Identity = 107/154 (69.48%), Postives = 117/154 (75.97%), Query Frame = 1 
Query:    1 MHRHLLGTEP-NTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            MHR +L T P + AP+ GNRT DSYI+E NFD+NMVIILAAL                      RFALET E+AAARLAATGLKK  LRQIP+A+YG+G  I ATECPICLGEF DGEKVRVLP+CNHGFHVRCIDTWLLSHSSCPNCRHSLLE
Sbjct:    1 MHRRMLDTVPLDVAPANGNRTHDSYINETNFDTNMVIILAALLCALIGALGLNSIVRCLLRCSSRFALETTEEAAARLAATGLKKRDLRQIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLE 154
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|225448677|ref|XP_002275084.1| (PREDICTED: RING-H2 finger protein ATL72 [Vitis vinifera] >gi|147769463|emb|CAN70348.1| hypothetical protein VITISV_012580 [Vitis vinifera] >gi|297736494|emb|CBI25365.3| unnamed protein product [Vitis vinifera])

HSP 1 Score: 197.978 bits (502), Expect = 6.069e-49
Identity = 99/159 (62.26%), Postives = 115/159 (72.33%), Query Frame = 1 
Query:    4 HRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKS 417
            HR LL T+P  +P+ G+R   SY +EANFD+NMVIILAAL                      R A ET ++ AARLAATGLKKS LRQIP+AVYGSG  IPAT+CPICLGEFE G+KVRVLP+C+HGFH++CIDTWL+SHSSCP CRHSLLE  HP  S
Sbjct:    9 HRLLLDTDPGASPNVGSRMRSSYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETADETAARLAATGLKKSALRQIPVAVYGSGTNIPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCPTCRHSLLE--HPPAS 165
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|255575568|ref|XP_002528684.1| (RING-H2 finger protein ATL5A, putative [Ricinus communis] >gi|223531856|gb|EEF33673.1| RING-H2 finger protein ATL5A, putative [Ricinus communis])

HSP 1 Score: 197.208 bits (500), Expect = 1.035e-48
Identity = 113/209 (54.07%), Postives = 127/209 (60.77%), Query Frame = 1 
Query:    1 MHRHLLGTE---PNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTRTNSPSTXXXXXXXXXXXXXXXXXXXSTNEPNQQGRVVIVIEQAS 555
            MHR LL TE   P  +P  G RT DSYI  ANFD+NMVIILAAL                      RF+LETPEQ AARLAA GLKK  LRQIP+AVYG+ V IPATECPICLGEF DGEKVR+LP+CNHGFHVRCIDTWLLSHSSCPNCR SLL     ++ +                            N P +Q  V++V+E AS
Sbjct:    1 MHRRLLETELTVPQPSPD-GTRTRDSYIIGANFDTNMVIILAALLCALLGALGLNSIVRCALRCSSRFSLETPEQTAARLAAKGLKKRELRQIPVAVYGTEVSIPATECPICLGEFLDGEKVRLLPKCNHGFHVRCIDTWLLSHSSCPNCRLSLLXSGAAQEESGRRQ----------------------GENSPGRQRNVIVVVEGAS 186
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|255559693|ref|XP_002520866.1| (RING-H2 finger protein ATL3C, putative [Ricinus communis] >gi|223539997|gb|EEF41575.1| RING-H2 finger protein ATL3C, putative [Ricinus communis])

HSP 1 Score: 189.119 bits (479), Expect = 2.819e-46
Identity = 102/163 (62.58%), Postives = 114/163 (69.94%), Query Frame = 1 
Query:    4 HRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGS-GVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTRT 426
            HR LL TE NT P  G+R   SY +EANFD+NMVIILAAL                      RFA ETP++AAARLAATGLKKS LRQIP+ +YG+ G++I AT+C ICLGEF DGEKVRVLP+CNHGFHVRCIDTWL SHSSCP CR SLLE   P  S  T
Sbjct:   12 HRLLLNTESNTPPINGSRIR-SYTNEANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPDEAAARLAATGLKKSALRQIPVVIYGAAGIQIIATDCAICLGEFSDGEKVRVLPKCNHGFHVRCIDTWLGSHSSCPTCRQSLLEQPAPGNSDAT 173
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|356530175|ref|XP_003533659.1| (PREDICTED: RING-H2 finger protein ATL73-like [Glycine max])

HSP 1 Score: 184.882 bits (468), Expect = 5.317e-45
Identity = 100/160 (62.50%), Postives = 114/160 (71.25%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFG----NRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGS-GVE--IPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            + R LL TE +  PS+G    N T D++IS+ANFD+NMVIILAAL                      RF  ET EQAAARLA TGLK+  L +IP+AVYG+ G E  IPATECPICLGEFE G+KVR+LP+CNHGFHVRCIDTWLLSHSSCPNCRHSLLE
Sbjct:    2 LQRRLLETELSMPPSYGGSGGNNTRDTFISDANFDTNMVIILAALLCALICALGLNSIARCALRCGRRFGDETAEQAAARLAGTGLKRRELSRIPVAVYGAAGGENTIPATECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLE 161
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|356518700|ref|XP_003528016.1| (PREDICTED: RING-H2 finger protein ATL72-like [Glycine max])

HSP 1 Score: 184.882 bits (468), Expect = 5.317e-45
Identity = 100/161 (62.11%), Postives = 111/161 (68.94%), Query Frame = 1 
Query:    1 MHRHLLGTEPNT---APSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSG-VEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHP 408
            +H  LL  + N+   APS  NRT +++  +ANFD+NMVIILAAL                      RFA ETPE+ AARL A GLKKS L QIPI VYGSG   I AT+CPICLGEF DGEKVRVLP+CNHGFHVRCIDTWLLSHSSCPNCR SLLE  HP
Sbjct:    3 LHHRLLLVDTNSSSPAPSSMNRTRETFTGDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPIVVYGSGSASIAATDCPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCRQSLLE--HP 161
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|356568234|ref|XP_003552318.1| (PREDICTED: RING-H2 finger protein ATL72-like [Glycine max])

HSP 1 Score: 182.956 bits (463), Expect = 2.020e-44
Identity = 96/156 (61.54%), Postives = 111/156 (71.15%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFGN-RTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSGVE--IPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            M R  L TE +  PS+G   T+D++IS+ANFD+NMVIILAAL                       F  ET EQAAARLA TGLK+  L +IP+AVYG+  E  IPATECPICLGEFE G++VR+LP+CNHGFHVRCIDTWLLSHSSCPNCRHSLLE
Sbjct:    1 MQRRFLETELSMPPSYGGGNTSDTFISDANFDTNMVIILAALLCALICALGLNSIARCALRCGRPFGNETAEQAAARLAGTGLKRRELSRIPVAVYGAAGENTIPATECPICLGEFEKGDRVRMLPKCNHGFHVRCIDTWLLSHSSCPNCRHSLLE 156
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|225439685|ref|XP_002271473.1| (PREDICTED: RING-H2 finger protein ATL72-like [Vitis vinifera])

HSP 1 Score: 180.644 bits (457), Expect = 1.003e-43
Identity = 94/147 (63.95%), Postives = 105/147 (71.43%), Query Frame = 1 
Query:    4 HRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY-----RFALETPEQAAARL-----------AATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            HR LL T   +  S GN T ++Y++E NFD+NMVIILAAL         L +  + A R            AATGLKK  LRQIP+AVYG GVEIPATECPICLGEF  GEKVRVLP+CNHGFHVRCIDTWL+SHSSCPNCRHSLLE
Sbjct:   14 HRLLLDTPEPSTMSNGNSTHEAYVNETNFDTNMVIILAALLCALIGALGLNSIVRCAMRCSRRLSPESQGQAATGLKKRALRQIPVAVYGPGVEIPATECPICLGEFVQGEKVRVLPKCNHGFHVRCIDTWLVSHSSCPNCRHSLLE 160
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|356509076|ref|XP_003523278.1| (PREDICTED: RING-H2 finger protein ATL72-like [Glycine max])

HSP 1 Score: 179.874 bits (455), Expect = 1.710e-43
Identity = 96/157 (61.15%), Postives = 108/157 (68.79%), Query Frame = 1 
Query:    1 MHRHLLGTEPNT---APSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYGSG-VEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLLE 396
            +H  LL  + N+   APS  N+T +++  +ANFD+NMVIILAAL                      RFA ETPE+ AARL A GLKKS L QIPI VYGSG   I AT+CPICLGEF DGEKVRVLP+CNH FHVRCIDTWLLSHSSCPNCR SLLE
Sbjct:    3 LHHRLLLVDTNSSSPAPSSMNKTRETFTGDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPIVVYGSGSASIAATDCPICLGEFVDGEKVRVLPKCNHRFHVRCIDTWLLSHSSCPNCRQSLLE 159
[Close]
BLAST of ppa012052m vs. NCBI nr
Match: gi|357506657|ref|XP_003623617.1| (RING-H2 finger protein ATL5H [Medicago truncatula] >gi|355498632|gb|AES79835.1| RING-H2 finger protein ATL5H [Medicago truncatula])

HSP 1 Score: 178.718 bits (452), Expect = 3.810e-43
Identity = 91/153 (59.48%), Postives = 106/153 (69.28%), Query Frame = 1 
Query:    1 MHRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALY---------------------RFALETPEQAAARLAATGLKKSHLRQIPIAVYG-SGVEIPATECPICLGEFEDGEKVRVLPECNHGFHVRCIDTWLLSHSSCPNCRHSLL 393
            M R  L TE +  PS+ N T+DS+I+  NFD+NMVIILAAL                      R + ETPEQA  RL  TGLKK  L QIP+ VYG +G +IP TECPICLGEFE G+KVR+LP+CNHGFHVRCIDTWL+SHSSCPNCR+SLL
Sbjct:    1 MKRRFLDTEMSMPPSYENNTSDSFINVENFDTNMVIILAALLCALICALGLNTIARCAMRCSRRLSEETPEQATVRLNKTGLKKRELSQIPVTVYGGAGEDIPVTECPICLGEFEKGDKVRMLPKCNHGFHVRCIDTWLVSHSSCPNCRNSLL 153
The following BLAST results are available for this feature:
BLAST of ppa012052m vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Vitis vinifera)
Total hits: 25
Match NameE-valueIdentityDescription
GSVIVT010326840011.989e-5162.26assembled CDS[more]
GSVIVT010267030013.097e-2051.95assembled CDS[more]
GSVIVT010223060013.097e-2047.12assembled CDS[more]
GSVIVT010131450016.457e-1847.44assembled CDS[more]
GSVIVT010156820011.101e-1742.71assembled CDS[more]
GSVIVT010090960011.439e-1742.11assembled CDS[more]
GSVIVT010280380011.879e-1755.88assembled CDS[more]
GSVIVT010237760014.186e-1746.07assembled CDS[more]
GSVIVT010166610015.466e-1745.35assembled CDS[more]
GSVIVT010165640014.628e-1644.44assembled CDS[more]

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BLAST of ppa012052m vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B9IGS7_POPTR3.704e-5269.48Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BMU1_VITVI6.538e-4962.26Putative uncharacterized protein OS=Vitis vinifera... [more]
B9SRS1_RICCO1.115e-4854.07RING-H2 finger protein ATL5A, putative OS=Ricinus ... [more]
B9S4E7_RICCO3.037e-4662.58RING-H2 finger protein ATL3C, putative OS=Ricinus ... [more]
I1L711_SOYBN5.727e-4562.50Uncharacterized protein OS=Glycine max GN=Gma.2020... [more]
I1KB81_SOYBN5.727e-4562.11Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
I1N390_SOYBN2.176e-4461.54Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
F6GXX0_VITVI1.080e-4363.95Putative uncharacterized protein OS=Vitis vinifera... [more]
I1JYB7_SOYBN1.842e-4361.15Uncharacterized protein OS=Glycine max GN=Gma.5360... [more]
G7KY47_MEDTR4.104e-4359.48RING-H2 finger protein ATL5H OS=Medicago truncatul... [more]

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BLAST of ppa012052m vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot)
Total hits: 25
Match NameE-valueIdentityDescription
ATL74_ARATH6.703e-3651.30RING-H2 finger protein ATL74 OS=Arabidopsis thalia... [more]
ATL72_ARATH6.936e-3352.17RING-H2 finger protein ATL72 OS=Arabidopsis thalia... [more]
ATL73_ARATH2.553e-2744.71RING-H2 finger protein ATL73 OS=Arabidopsis thalia... [more]
ATL78_ARATH2.473e-2239.22RING-H2 finger protein ATL78 OS=Arabidopsis thalia... [more]
ATL76_ARATH8.795e-2047.78E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis t... [more]
ATL77_ARATH3.342e-1950.67RING-H2 finger protein ATL77 OS=Arabidopsis thalia... [more]
ATL10_ARATH1.270e-1852.00RING-H2 finger protein ATL10 OS=Arabidopsis thalia... [more]
ATL75_ARATH1.659e-1850.67RING-H2 finger protein ATL75 OS=Arabidopsis thalia... [more]
ATL49_ARATH2.829e-1845.54Putative RING-H2 finger protein ATL49 OS=Arabidops... [more]
ATL54_ARATH1.834e-1752.70RING-H2 finger protein ATL54 OS=Arabidopsis thalia... [more]

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BLAST of ppa012052m vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs TAIR 10)
Total hits: 25
Match NameE-valueIdentityDescription
AT5G01880.16.891e-3751.30| Symbols: | RING/U-box superfamily protein | chr... [more]
AT3G10910.17.131e-3452.17| Symbols: | RING/U-box superfamily protein | chr... [more]
AT5G05280.12.624e-2844.71| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G49230.12.542e-2339.22| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G49210.19.041e-2147.78| Symbols: | RING/U-box superfamily protein | chr... [more]
AT3G18773.13.436e-2050.67| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G49220.11.306e-1952.00| Symbols: | RING/U-box superfamily protein | chr... [more]
AT1G49200.11.705e-1950.67| Symbols: | RING/U-box superfamily protein | chr... [more]
AT2G18650.12.908e-1945.54| Symbols: MEE16 | RING/U-box superfamily protein ... [more]
AT1G72220.11.885e-1852.70| Symbols: | RING/U-box superfamily protein | chr... [more]

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BLAST of ppa012052m vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0)
Total hits: 25
Match NameE-valueIdentityDescription
POPTR_0016s14320.11.851e-5469.48[more]
POPTR_0013s09370.14.417e-4864.29[more]
POPTR_0019s08600.14.278e-4359.09[more]
POPTR_0019s15050.13.397e-3253.38[more]
POPTR_0013s15290.15.795e-3251.41[more]
POPTR_0001s31710.12.358e-2543.15[more]
POPTR_0019s02620.11.529e-2441.33[more]
POPTR_0001s15930.13.187e-2236.05[more]
POPTR_0003s07270.11.211e-2136.05[more]
POPTR_0001s31720.14.602e-2139.07[more]

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BLAST of ppa012052m vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0)
Total hits: 25
Match NameE-valueIdentityDescription
MDP00004861563.813e-6363.16MDP0000486156[more]
MDP00002207903.813e-6363.16MDP0000220790[more]
MDP00002318905.506e-6263.33MDP0000231890[more]
MDP00001313155.506e-6263.33MDP0000131315[more]
MDP00002525904.683e-4560.14MDP0000252590[more]
MDP00002473711.779e-4462.59MDP0000247371[more]
MDP00008535172.185e-2641.14MDP0000853517[more]
MDP00008039112.764e-2151.09MDP0000803911[more]
MDP00001266531.792e-2041.96MDP0000126653[more]
MDP00001661081.792e-2041.96MDP0000166108[more]

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BLAST of ppa012052m vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs NCBI nr )
Total hits: 25
Match NameE-valueIdentityDescription
gi|224139358|ref|XP_002323073.1|3.438e-5269.48predicted protein [Populus trichocarpa] >gi|222867... [more]
gi|225448677|ref|XP_002275084.1|6.069e-4962.26PREDICTED: RING-H2 finger protein ATL72 [Vitis vin... [more]
gi|255575568|ref|XP_002528684.1|1.035e-4854.07RING-H2 finger protein ATL5A, putative [Ricinus co... [more]
gi|255559693|ref|XP_002520866.1|2.819e-4662.58RING-H2 finger protein ATL3C, putative [Ricinus co... [more]
gi|356530175|ref|XP_003533659.1|5.317e-4562.50PREDICTED: RING-H2 finger protein ATL73-like [Glyc... [more]
gi|356518700|ref|XP_003528016.1|5.317e-4562.11PREDICTED: RING-H2 finger protein ATL72-like [Glyc... [more]
gi|356568234|ref|XP_003552318.1|2.020e-4461.54PREDICTED: RING-H2 finger protein ATL72-like [Glyc... [more]
gi|225439685|ref|XP_002271473.1|1.003e-4363.95PREDICTED: RING-H2 finger protein ATL72-like [Viti... [more]
gi|356509076|ref|XP_003523278.1|1.710e-4361.15PREDICTED: RING-H2 finger protein ATL72-like [Glyc... [more]
gi|357506657|ref|XP_003623617.1|3.810e-4359.48RING-H2 finger protein ATL5H [Medicago truncatula]... [more]

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InterPro
Analysis Name: InterProScan of Prunus persica Whole Genome v1.0
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184Ring fingercoord: 85..126
score: 1.1
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 85..127
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10no descriptioncoord: 83..130
score: 1.1
NoneNo IPR availablePANTHERPTHR22765FAMILY NOT NAMEDcoord: 18..127
score: 2.5
NoneNo IPR availablePANTHERPTHR22765:SF22OS05G0478000 PROTEINcoord: 18..127
score: 2.5
NoneNo IPR availablePFAMPF13639zf-RING_2coord: 84..128
score: 1.2
NoneNo IPR availableSEGsegsegcoord: 148..166
score
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 59..133
score: 2.2
NoneNo IPR availableSEGsegsegcoord: 34..49
score
NoneNo IPR availableSEGsegsegcoord: 29..38
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>ppa012052m ID=ppa012052m; Name=ppa012052m; organism=Prunus persica; type=mRNA; length=570bp
ATGCATCGACATCTACTCGGCACAGAGCCAAATACGGCGCCGTCCTTTGG
GAACAGGACAGCAGATTCATACATTAGCGAGGCCAACTTTGACTCCAACA
TGGTGATCATATTGGCAGCCCTCTACAGGTTTGCTTTGGAGACGCCGGAA
CAAGCAGCTGCAAGGTTGGCAGCCACAGGCCTGAAGAAGAGCCATTTGCG
CCAGATCCCAATTGCTGTTTATGGCTCCGGCGTGGAAATTCCGGCCACAG
AATGCCCAATTTGCCTTGGAGAGTTTGAAGATGGAGAAAAAGTCAGGGTG
CTGCCAGAATGCAATCACGGATTTCATGTGAGGTGCATAGATACATGGCT
TTTGTCCCACTCGTCCTGCCCAAACTGTCGACATTCACTGCTTGAACTGC
ACCATCCCAAAAAGAGTACCAGGACTAATAGTCCCAGTACTGCTGATGCA
AGCCAAAATCAAGAAGCTGCTGCTGTTGCTGCAGCAGAGCCATCAAATTC
AACCAATGAGCCCAACCAGCAAGGCAGAGTTGTCATAGTCATTGAGCAGG
CAAGTTAAATTAAACCTGCC
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protein sequence of ppa012052m

>ppa012052m ID=ppa012052m; Name=ppa012052m; organism=Prunus persica; type=polypeptide; length=186bp
MHRHLLGTEPNTAPSFGNRTADSYISEANFDSNMVIILAALYRFALETPE
QAAARLAATGLKKSHLRQIPIAVYGSGVEIPATECPICLGEFEDGEKVRV
LPECNHGFHVRCIDTWLLSHSSCPNCRHSLLELHHPKKSTRTNSPSTADA
SQNQEAAAVAAAEPSNSTNEPNQQGRVVIVIEQAS*
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mRNA from alignment at scaffold_6:25092824..25093456+

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ppa012052m ID=ppa012052m; Name=ppa012052m; organism=Prunus persica; type=mRNA; length=633bp; location=Sequence derived from: scaffold_6:25092824..25093456+ (Prunus persica
ATGCATCGACATCTACTCGGCACAGAGCCAAATACGGCGCCGTCCTTTGG
GAACAGGACAGCAGATTCATACATTAGCGAGGCCAACTTTGACTCCAACA
TGGTGATCATATTGGCAGCCCTGTTATGTGCTCTGATATGTGCACTTGGG
CTCAACTCAATTGTCCGCTGTGCCCTGCGCTGCAGCTACAGGTTTGCTTT
GGAGACGCCGGAACAAGCAGCTGCAAGGTTGGCAGCCACAGGCCTGAAGA
AGAGCCATTTGCGCCAGATCCCAATTGCTGTTTATGGCTCCGGCGTGGAA
ATTCCGGCCACAGAATGCCCAATTTGCCTTGGAGAGTTTGAAGATGGAGA
AAAAGTCAGGGTGCTGCCAGAATGCAATCACGGATTTCATGTGAGGTGCA
TAGATACATGGCTTTTGTCCCACTCGTCCTGCCCAAACTGTCGACATTCA
CTGCTTGAACTGCACCATCCCAAAAAGAGTACCAGGACTAATAGTCCCAG
TACTGCTGATGCAAGCCAAAATCAAGAAGCTGCTGCTGTTGCTGCAGCAG
AGCCATCAAATTCAACCAATGAGCCCAACCAGCAAGGCAGAGTTGTCATA
GTCATTGAGCAGGCAAGTTAAATTAAACCTGCC
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Coding sequence (CDS) from alignment at scaffold_6:25092824..25093456+

>ppa012052m ID=ppa012052m; Name=ppa012052m; organism=Prunus persica; type=CDS; length=558bp; location=Sequence derived from: scaffold_6:25092824..25093456+ (Prunus persica
ATGCATCGACATCTACTCGGCACAGAGCCAAATACGGCGCCGTCCTTTGG
GAACAGGACAGCAGATTCATACATTAGCGAGGCCAACTTTGACTCCAACA
TGGTGATCATATTGGCAGCCCTCTACAGGTTTGCTTTGGAGACGCCGGAA
CAAGCAGCTGCAAGGTTGGCAGCCACAGGCCTGAAGAAGAGCCATTTGCG
CCAGATCCCAATTGCTGTTTATGGCTCCGGCGTGGAAATTCCGGCCACAG
AATGCCCAATTTGCCTTGGAGAGTTTGAAGATGGAGAAAAAGTCAGGGTG
CTGCCAGAATGCAATCACGGATTTCATGTGAGGTGCATAGATACATGGCT
TTTGTCCCACTCGTCCTGCCCAAACTGTCGACATTCACTGCTTGAACTGC
ACCATCCCAAAAAGAGTACCAGGACTAATAGTCCCAGTACTGCTGATGCA
AGCCAAAATCAAGAAGCTGCTGCTGTTGCTGCAGCAGAGCCATCAAATTC
AACCAATGAGCCCAACCAGCAAGGCAGAGTTGTCATAGTCATTGAGCAGG
CAAGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding