ppa012461m, ppa012461m (mRNA) Prunus persica

Transcript Overview


Name	ppa012461m
Unique Name	ppa012461m
Type	mRNA
Organism	Prunus persica (Peach)
Sequence length	594

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
scaffold_5	supercontig	scaffold_5:740825..741418 -	Prunus persica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Prunus persica Whole Genome v1.0 Assembly & Annotation	2012-01-16
InterProScan of Prunus persica Whole Genome v1.0	2012-07-23
BLASTx of Prunus persica v1.0 vs Vitis vinifera	2012-07-23
BLASTx of Prunus persica v1.0 vs UniProt TrEMBL	2012-07-23
BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot	2012-07-23
BLASTx of Prunus persica v1.0 vs TAIR 10	2012-07-23
BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0	2012-07-23
BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0	2012-07-23
BLASTx of Prunus persica v1.0 vs NCBI nr	2012-07-23

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ppa012461m.g	ppa012461m.g	Prunus persica	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ppa012461m.CDS.1	ppa012461m.CDS.1	Prunus persica	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ppa012461m.five_prime_UTR.1	ppa012461m.five_prime_UTR.1	Prunus persica	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ppa012461m	ppa012461m	Prunus persica	polypeptide

Cross References

External references for this mRNA


Database	Accession
"Phytozome_pacid	17656862"

Homology

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01022306001 (assembled CDS)

HSP 1 Score: 135.576 bits (340), Expect = 1.026e-32
Identity = 62/89 (69.66%), Postives = 71/89 (79.78%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKKIL+SLPKLT+ A  + KF ECAICL EF  GDEIR LPQCGH FHV C+D WL SHSSCPSCRQI  V ++C +CG FP++S
Sbjct:   72 NKGLKKKILQSLPKLTHDATVSGKFAECAICLAEFVEGDEIRVLPQCGHGFHVLCVDTWLSSHSSCPSCRQI-LVVTRCRQCGKFPAIS 159

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01032684001 (assembled CDS)

HSP 1 Score: 86.2705 bits (212), Expect = 7.137e-18
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1

Query:  244 GLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            GLKK  LR +P   Y +      T+C ICL EF  GD++R LP+C H FH+ CID WL SHSSCP+CR
Sbjct:   88 GLKKSALRQIPVAVYGSGTNIPATDCPICLGEFEQGDKVRVLPKCHHGFHMKCIDTWLVSHSSCPTCR 155

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01016661001 (assembled CDS)

HSP 1 Score: 82.0333 bits (201), Expect = 1.346e-16
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 1

Query:  241 KGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSS 468
            +GL   IL S+P L +  +      ECA+CL+E   G++ R LP+C H FHV CID+W +SHS+CP CR +   SS
Sbjct:   96 RGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPKCNHGFHVECIDMWFQSHSTCPLCRNLVATSS 171

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01024698001 (assembled CDS)

HSP 1 Score: 79.337 bits (194), Expect = 8.725e-16
Identity = 35/69 (50.72%), Postives = 42/69 (60.87%), Query Frame = 1

Query:  241 KGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            KGL    + S+P   Y A+      EC ICL+ F   D  R LP+CGH FHV CID+WL SHS+CP CR
Sbjct:   94 KGLDSSAISSIPLFVYKAEEHKHGLECVICLSVFEDDDVGRNLPKCGHAFHVQCIDMWLHSHSNCPICR 162

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01028038001 (assembled CDS)

HSP 1 Score: 77.7962 bits (190), Expect = 2.539e-15
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKC 483
            ++GL   IL+SLP   Y+        ECA+CL+EF   ++ R LP+C H FH  CID+W  SHS+CP CR +  +S    +C
Sbjct:   82 DQGLDVSILKSLPTFVYSKATHGPILECAVCLSEFEDDEKGRVLPKCNHCFHNDCIDMWFHSHSNCPLCRAL-TISGASPRC 162

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01037142001 (assembled CDS)

HSP 1 Score: 77.0258 bits (188), Expect = 4.330e-15
Identity = 28/68 (41.18%), Postives = 46/68 (67.65%), Query Frame = 1

Query:  244 GLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            GLKK++   LP + +    +   T+C++CL ++ A D ++++P CGH FH+ CID WL +H++CP CR
Sbjct:   75 GLKKEVREMLPIIVFKESFSVSDTQCSVCLADYQAEDRLQQIPACGHTFHMDCIDHWLATHTTCPLCR 142

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01026703001 (assembled CDS)

HSP 1 Score: 74.7146 bits (182), Expect = 2.149e-14
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 1

Query:  244 GLKKKILRSLPKLTYT-ADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            GL++  ++S+    Y  +    + T+C++CL+EF  G+ +R LP+C H FH+ CID WL+SHSSCP CR
Sbjct:  109 GLEEGFIKSITVYKYKKSGGVVEGTDCSVCLSEFEDGENLRLLPKCNHAFHLPCIDTWLKSHSSCPLCR 177

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01023776001 (assembled CDS)

HSP 1 Score: 74.7146 bits (182), Expect = 2.149e-14
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 1

Query:  244 GLKKKILRSLPKLTYTADCTSKFT-ECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            G+ +  + +LP   Y A   +K   +CA+CL EF A D++R LP+C H FH+ CID WL SHS+CP CR
Sbjct:  148 GVDQSFIDTLPVFLYKAIIGAKNPFDCAVCLCEFEAEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR 216

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01005189001 (assembled CDS)

HSP 1 Score: 74.7146 bits (182), Expect = 2.149e-14
Identity = 31/74 (41.89%), Postives = 44/74 (59.46%), Query Frame = 1

Query:  241 KGLKKKILRSLPKLTYTAD----CTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQ 450
            KGL    +  +PK+T T+D     + +   C++CL +F  G+ +R LP C H FH+ CID WL  H SCP CR+
Sbjct:  160 KGLPGDSVEKIPKITITSDNNGDASGEKVSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDKWLLGHGSCPLCRR 233

[Close]

BLAST of ppa012461m vs. Vitis vinifera
Match: GSVIVT01016564001 (assembled CDS)

HSP 1 Score: 74.3294 bits (181), Expect = 2.807e-14
Identity = 28/43 (65.12%), Postives = 36/43 (83.72%), Query Frame = 1

Query:  319 CAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            CA+CL+EF  G+E+R LP+C H FHVACID+WL SH++CP CR
Sbjct:   94 CAVCLSEFEEGEELRTLPECMHSFHVACIDMWLYSHTNCPLCR 136

HSP 2 Score: 73.1738 bits (178), Expect = 6.253e-14
Identity = 37/79 (46.84%), Postives = 43/79 (54.43%), Query Frame = 1

Query:  259 ILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFP 495
            I   +P   YT D       C +CL EF  G+ IR LP+C H FHV CID+WL SHS+CP CR    V S  H  G  P
Sbjct:  288 ITNLIPSFHYTKDIGLVNATCVVCLCEFKDGEAIRILPKCLHSFHVPCIDMWLCSHSNCPLCR--TTVISSGHVLGHRP 364

HSP 3 Score: 70.0922 bits (170), Expect = 5.293e-13
Identity = 26/43 (60.47%), Postives = 32/43 (74.42%), Query Frame = 1

Query:  319 CAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            C +CL+EF  G+E+R LP C H FHV CID+WL SH +CP CR
Sbjct:  207 CVVCLSEFEEGEELRTLPHCMHSFHVPCIDMWLNSHMNCPLCR 249

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: C6TKF9_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.37209 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.212e-33
Identity = 67/87 (77.01%), Postives = 74/87 (85.06%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKG+KKK+LRSLPKLT TA+   KF +CAICLTEFAAGDEIR LPQCGH FHV+CID WLRSHSSCPSCRQI  V S+C KCGG P+
Sbjct:   70 NKGVKKKVLRSLPKLTATAESAVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQI-LVVSRCDKCGGIPA 155

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: I1K799_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.27897 PE=4 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.378e-32
Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKG+KKK+LRSLPK+T +A+   KF +CAICLTEFAAGDEIR LPQCGH FHV+CID WLRSHSSCPSCRQI  V S+C KCGG P+
Sbjct:   70 NKGVKKKVLRSLPKVTASAESAVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQI-LVVSRCDKCGGIPA 155

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: D7KTT0_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_316562 PE=4 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.762e-32
Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADC--TSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+LRSLPKLTY+ D     K  ECAICLTEFAAGDE+R LPQCGH FHV+CID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   75 NKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVARCHKCGGLPGSS 164

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: F2VPP7_SOLNI (RING-H2 finger protein RHA3b (Fragment) OS=Solanum nigrum GN=RHA3b PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.526e-32
Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+LRSLPK +YT++ ++KF+ECAICL EF  GDEIR LPQCGH FHV CID WL SHSSCPSCRQIP V S+CH CG  P  S
Sbjct:   29 NKGLKKKVLRSLPKFSYTSERSAKFSECAICLMEFVVGDEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQIP-VVSRCHMCGELPVTS 116

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: G7J5Z4_MEDTR (RING-H2 finger protein ATL1B OS=Medicago truncatula GN=MTR_3g116000 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.284e-31
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFP 495
            NKG+KKK+LRSLPKLT T +   KF++CAICL+EF AGDEIR LPQCGH FHV+CID+WLRSHSSCPSCRQI  V S+C KCGG P
Sbjct:   77 NKGVKKKVLRSLPKLTATEESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQI-LVVSRCDKCGGIP 161

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: B9R8S1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1601910 PE=4 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.284e-31
Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKGLKKKILRSLPK T++AD T KF +CAICL EFA GDEIR LPQCGH FHV+CID WL SHSSCPSCRQI  V ++C KCGG P+
Sbjct:   87 NKGLKKKILRSLPKQTFSADSTPKFYDCAICLAEFAPGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVARCQKCGGLPA 172

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: A0MZQ0_BRACM (Zinc finger protein OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.284e-31
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTS--KFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+L+SLPKLT++ D  S  KFTECAICLTEF+ GDE+R LPQCGH FHV+CID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   85 NKGLKKKVLQSLPKLTFSPDSPSSEKFTECAICLTEFSNGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVARCHKCGGLPGSS 174

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: B9GPP9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_753870 PE=4 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.677e-31
Identity = 74/166 (44.58%), Postives = 87/166 (52.41%), Query Frame = 1

Query:    1 MTRPLRLLGGAFNPPALFSEPDDESSANMGSDSXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXNKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            M RP   L    N  A  +    ++SA + SD                         W                     NKGLKKK+LRSLPK T++ D + K  +CAICLTEF+AGDEIR LPQCGH FHV+CID WL SHSSCPSCRQI  V ++C KCGG PS
Sbjct:    1 MARPFSFLNAVANSSATTTGSPPQASATVDSDFMVILAALLCALICVLGLIAVARCAWLRRFSSRNPTPPVPPPPPSVANKGLKKKVLRSLPKQTFSEDFSGKLPDCAICLTEFSAGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVARCQKCGGLPS 165

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: B9H5V1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_801629 PE=4 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.860e-31
Identity = 64/87 (73.56%), Postives = 70/87 (80.46%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKGLKKK LRSLPK T++ D   KF++CAICLTEF+ GDEIR LPQCGH FHVACID WL SHSSCPSCRQI  V  +C KCGG PS
Sbjct:   47 NKGLKKKTLRSLPKQTFSEDSAGKFSDCAICLTEFSVGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILMV-DRCQKCGGLPS 132

[Close]

BLAST of ppa012461m vs. ExPASy TrEMBL
Match: F6I6U9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00870 PE=4 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.419e-30
Identity = 63/89 (70.79%), Postives = 69/89 (77.53%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKKILRSLPK+TY A+     T+CAICLTEF  GDEIR LPQCGH FHV CID WL SH SCPSCRQI  V ++C KCGG P+ S
Sbjct:   74 NKGLKKKILRSLPKVTYAAETAGNLTDCAICLTEFVGGDEIRVLPQCGHGFHVGCIDTWLGSHCSCPSCRQI-LVVARCQKCGGVPASS 161

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL8_ARATH (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 2.468e-33
Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADC--TSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+LRSLPKLTY+ D     K  ECAICLTEFAAGDE+R LPQCGH FHV+CID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   75 NKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVTRCHKCGGLPGSS 164

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL80_ARATH (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.564e-32
Identity = 64/91 (70.33%), Postives = 74/91 (81.32%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADC--TSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+L+SLPKLT++ +   + KF ECAICL EF+AGDE+R LPQCGH FHVACID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   82 NKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQI-LVVARCHKCGGLPGSS 171

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL45_ARATH (RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.024e-23
Identity = 57/99 (57.58%), Postives = 65/99 (65.66%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTAD-----------CTS-----KFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCG 486
            NKGLKKK L++LPK TYTA            C+S       TECAIC+TEF+ G+EIR LP C H FHVACID WL S SSCPSCR+I  V  KC +CG
Sbjct:   70 NKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRI-LVPVKCDRCG 167

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL44_ARATH (RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.960e-22
Identity = 55/91 (60.44%), Postives = 64/91 (70.33%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTA-DCTS-------KFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCG 486
            NKGLKKK L+SLP+ T+TA + TS         TECAICLT+FA G+EIR LP CGH FHV CID WL S SSCPSCR+I     +C +CG
Sbjct:   67 NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRI-LTPVRCDRCG 156

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL73_ARATH (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.243e-18
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 1

Query:  241 KGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQ 450
            KG+KK+ L+ +P  +Y+ +   K TEC ICL +F  G+ +R LP+C H FHV CID WL SHSSCP+CRQ
Sbjct:   87 KGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQ 156

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL74_ARATH (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.742e-16
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 1

Query:  244 GLKKKILRSLPKLTY-TADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            GLKK+ L+  P   Y + +     TECAICL EFA G+ +R LP C H FH++CID WL SHSSCP+CR
Sbjct:   79 GLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 147

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL78_ARATH (RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.676e-16
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCT--SKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQ-IPEVSSKCHKCGGFPSLS 504
            N G+K+K L+S   ++Y+ +       TECAICL+EF A + ++ LP C H FHV CID WL SHSSCP+CR  + +   K   C    SL+
Sbjct:  102 NTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLN 193

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL77_ARATH (RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.676e-16
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFT--ECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            NKG+KKK L+ LP + Y+ +        EC ICL++F AG+++R LP+C H FH+ CID WL  H +CP CR
Sbjct:  101 NKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCR 172

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL10_ARATH (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.676e-16
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCT--SKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            NKG+KKK LR  P ++Y+ +        EC ICL++F +G+++R LP+C H FHV CID WL+ H +CP CR
Sbjct:  106 NKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177

[Close]

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Match: ATL76_ARATH (E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.977e-16
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFT--ECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            NKG+KKK LR  P ++Y+ +        EC ICL++F +G+++R LP+C H FHV CID WL+ H +CP CR
Sbjct:  106 NKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCR 177

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT1G76410.1 (| Symbols: ATL8 | RING/U-box superfamily protein | chr1:28668915-28669472 FORWARD LENGTH=185)

HSP 1 Score: 141.354 bits (355), Expect = 2.653e-34
Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADC--TSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+LRSLPKLTY+ D     K  ECAICLTEFAAGDE+R LPQCGH FHV+CID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   75 NKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVTRCHKCGGLPGSS 164

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT1G20823.1 (| Symbols: | RING/U-box superfamily protein | chr1:7238880-7239473 FORWARD LENGTH=197)

HSP 1 Score: 137.502 bits (345), Expect = 3.830e-33
Identity = 64/91 (70.33%), Postives = 74/91 (81.32%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADC--TSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+L+SLPKLT++ +   + KF ECAICL EF+AGDE+R LPQCGH FHVACID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   82 NKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQI-LVVARCHKCGGLPGSS 171

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT4G35480.1 (| Symbols: RHA3B | RING-H2 finger A3B | chr4:16852233-16852835 REVERSE LENGTH=200)

HSP 1 Score: 107.842 bits (268), Expect = 3.250e-24
Identity = 57/99 (57.58%), Postives = 65/99 (65.66%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTAD-----------CTS-----KFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCG 486
            NKGLKKK L++LPK TYTA            C+S       TECAIC+TEF+ G+EIR LP C H FHVACID WL S SSCPSCR+I  V  KC +CG
Sbjct:   70 NKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRI-LVPVKCDRCG 167

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT2G17450.1 (| Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640-7577197 REVERSE LENGTH=185)

HSP 1 Score: 105.145 bits (261), Expect = 2.107e-23
Identity = 55/91 (60.44%), Postives = 64/91 (70.33%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTA-DCTS-------KFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCG 486
            NKGLKKK L+SLP+ T+TA + TS         TECAICLT+FA G+EIR LP CGH FHV CID WL S SSCPSCR+I     +C +CG
Sbjct:   67 NKGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRI-LTPVRCDRCG 156

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT5G05280.1 (| Symbols: | RING/U-box superfamily protein | chr5:1565509-1566039 REVERSE LENGTH=176)

HSP 1 Score: 91.6633 bits (226), Expect = 2.410e-19
Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 1

Query:  241 KGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQ 450
            KG+KK+ L+ +P  +Y+ +   K TEC ICL +F  G+ +R LP+C H FHV CID WL SHSSCP+CRQ
Sbjct:   87 KGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQ 156

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT5G01880.1 (| Symbols: | RING/U-box superfamily protein | chr5:339017-339496 FORWARD LENGTH=159)

HSP 1 Score: 84.7297 bits (208), Expect = 2.946e-17
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 1

Query:  244 GLKKKILRSLPKLTY-TADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            GLKK+ L+  P   Y + +     TECAICL EFA G+ +R LP C H FH++CID WL SHSSCP+CR
Sbjct:   79 GLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 147

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT3G18773.1 (| Symbols: | RING/U-box superfamily protein | chr3:6466304-6466966 FORWARD LENGTH=220)

HSP 1 Score: 83.9593 bits (206), Expect = 5.026e-17
Identity = 35/72 (48.61%), Postives = 48/72 (66.67%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFT--ECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            NKG+KKK L+ LP + Y+ +        EC ICL++F AG+++R LP+C H FH+ CID WL  H +CP CR
Sbjct:  101 NKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCPKCR 172

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT1G49220.1 (| Symbols: | RING/U-box superfamily protein | chr1:18205946-18206701 FORWARD LENGTH=251)

HSP 1 Score: 83.9593 bits (206), Expect = 5.026e-17
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCT--SKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            NKG+KKK LR  P ++Y+ +        EC ICL++F +G+++R LP+C H FHV CID WL+ H +CP CR
Sbjct:  106 NKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT1G49230.1 (| Symbols: | RING/U-box superfamily protein | chr1:18209320-18209979 FORWARD LENGTH=219)

HSP 1 Score: 83.9593 bits (206), Expect = 5.026e-17
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCT--SKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQ-IPEVSSKCHKCGGFPSLS 504
            N G+K+K L+S   ++Y+ +       TECAICL+EF A + ++ LP C H FHV CID WL SHSSCP+CR  + +   K   C    SL+
Sbjct:  102 NTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLN 193

[Close]

BLAST of ppa012461m vs. TAIR10
Match: AT1G49210.1 (| Symbols: | RING/U-box superfamily protein | chr1:18201994-18202671 FORWARD LENGTH=225)

HSP 1 Score: 83.1889 bits (204), Expect = 8.573e-17
Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFT--ECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            NKG+KKK LR  P ++Y+ +        EC ICL++F +G+++R LP+C H FHV CID WL+ H +CP CR
Sbjct:  106 NKGIKKKALRMFPVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCR 177

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0005s27660.1 ()

HSP 1 Score: 141.739 bits (356), Expect = 2.299e-34
Identity = 76/166 (45.78%), Postives = 85/166 (51.20%), Query Frame = 1

Query:    1 MTRPLRLLGGAFNPPALFSEPDDESSANMGSDSXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXNKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            MTRP RLL    N  A  +    +  A +  D                         W                     NKGLKKK LRSLPK T++ D   KF++CAICLTEF+ GDEIR LPQCGH FHVACID WL SHSSCPSCRQI  V  +C KCGG PS
Sbjct:    1 MTRPFRLLNADMNSSATTTGSPPQPPATVDPDFMVILAALLCALICVLGLIAVARCAWLRRLSSHTPAPPVPLPPPSVANKGLKKKTLRSLPKQTFSEDSAGKFSDCAICLTEFSVGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQILMV-DRCQKCGGLPS 165

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0002s00780.1 ()

HSP 1 Score: 139.813 bits (351), Expect = 8.735e-34
Identity = 74/166 (44.58%), Postives = 87/166 (52.41%), Query Frame = 1

Query:    1 MTRPLRLLGGAFNPPALFSEPDDESSANMGSDSXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXNKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            M RP   L    N  A  +    ++SA + SD                         W                     NKGLKKK+LRSLPK T++ D + K  +CAICLTEF+AGDEIR LPQCGH FHV+CID WL SHSSCPSCRQI  V ++C KCGG PS
Sbjct:    1 MARPFSFLNAVANSSATTTGSPPQASATVDSDFMVILAALLCALICVLGLIAVARCAWLRRFSSRNPTPPVPPPPPSVANKGLKKKVLRSLPKQTFSEDFSGKLPDCAICLTEFSAGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVARCQKCGGLPS 165

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0007s08550.1 ()

HSP 1 Score: 119.013 bits (297), Expect = 1.596e-27
Identity = 59/97 (60.82%), Postives = 69/97 (71.13%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTAD--------CTSKF--TECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKG+KKK L+ LP+ +Y+A          T+KF  TECAICL EF  GDE+R LPQCGH FHV CID WLRSHSSCPSCRQI  V ++C KC  FP+
Sbjct:   40 NKGVKKKNLQLLPRFSYSAGDGSGEGGGATTKFGSTECAICLGEFVEGDEVRVLPQCGHSFHVVCIDTWLRSHSSCPSCRQI-LVVARCQKCSHFPA 135

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0005s10190.1 ()

HSP 1 Score: 119.013 bits (297), Expect = 1.596e-27
Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTAD---CTSKF--TECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKG+KKK L+ LP+ TY+A     T+ F  TECAICL EF  GDE+R LPQCGH FHV CID WL SHSSCPSCRQI  V ++C KCG FP+
Sbjct:   69 NKGVKKKNLQLLPRFTYSAGGGGATTSFGTTECAICLGEFVEGDEVRVLPQCGHGFHVGCIDKWLGSHSSCPSCRQI-LVVARCQKCGQFPA 159

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0019s02610.1 ()

HSP 1 Score: 96.2857 bits (238), Expect = 1.108e-20
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKF----TECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            N+G+KKK L++ P + Y+A   SK     TEC IC++EF  GD +R LP+C H FHV CID+WL SHSSCP+CR    +   CHK  G    S
Sbjct:   92 NRGIKKKALKTFPVVNYSAK-DSKLPGLDTECVICISEFVFGDRVRILPKCSHVFHVRCIDMWLSSHSSCPTCRHC--LKETCHKIAGVSQAS 181

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0001s31720.1 ()

HSP 1 Score: 89.3521 bits (220), Expect = 1.354e-18
Identity = 44/93 (47.31%), Postives = 56/93 (60.22%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKF----TECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            N+G+KKK LR+ P   Y+ +  SK     T+C IC++EF  GD +R LP+C H FHV CID WL SHSSCP+CR    +   C K  G    S
Sbjct:   99 NRGIKKKALRTFPIENYSPE-KSKLPGLDTQCVICISEFVHGDRVRILPKCSHGFHVKCIDEWLSSHSSCPTCRHC--LMETCQKIAGVSQAS 188

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0016s14320.1 ()

HSP 1 Score: 88.9669 bits (219), Expect = 1.768e-18
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 1

Query:  244 GLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            GLKK+ LR +P   Y A  +   TEC ICL EF  G+++R LP+C H FHV CID WL SHSSCP+CR
Sbjct:   85 GLKKRDLRQIPVAIYGAGGSISATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPNCR 152

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0019s15050.1 ()

HSP 1 Score: 88.5817 bits (218), Expect = 2.309e-18
Identity = 38/82 (46.34%), Postives = 49/82 (59.76%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKC 483
            N GL K  L  +P +TY      + T+C ICL EF+ G+++R LP+C H FHV CID WL  HSSCP CRQ   +    + C
Sbjct:   74 NTGLMKSALGQIPVVTYEPGLNIQVTDCTICLGEFSEGEKVRVLPKCSHGFHVKCIDKWLLLHSSCPLCRQTLALDQSANNC 155

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0001s15930.1 ()

HSP 1 Score: 87.8113 bits (216), Expect = 3.939e-18
Identity = 41/71 (57.75%), Postives = 49/71 (69.01%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCT-SKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            N GLKKK + +LP  TY    + S  + CAICL +F  GD+IR LP+C HRFH  CID WL SHSSCP+CR
Sbjct:   77 NSGLKKKEMVALPTSTYAHQGSPSSASGCAICLADFTDGDKIRVLPKCNHRFHADCIDKWLLSHSSCPTCR 147

[Close]

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Match: POPTR_0001s31710.1 ()

HSP 1 Score: 87.0409 bits (214), Expect = 6.719e-18
Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCT--SKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGG 489
            N G+K+K L++ P + Y+ D       T+C ICL+EF  G+ +R LP+C H FHV CID WL SHSSCP+CR    +   C K  G
Sbjct:  107 NTGVKRKALKTFPIVKYSTDLNLPGLDTQCVICLSEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRHC--LIETCKKIAG 190

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000864704 (MDP0000864704)

HSP 1 Score: 201.83 bits (512), Expect = 2.493e-52
Identity = 102/166 (61.45%), Postives = 110/166 (66.27%), Query Frame = 1

Query:    1 MTRPLRLLGGAFNPPALFSEPDDE--SSANMGSDSXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXNKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGF 492
            MTRPLRLL  AF P +LFS P+DE  SS  MGSDS                        W                     NKGLKKK+LRSLPKLTYTADCTSKFTECAICLTEFA+GDEIRELPQCGH FHVACID WLRSHSSCPSCRQ+PE+S+KCHKCGG+
Sbjct:    1 MTRPLRLLS-AFKPSSLFSGPEDEPSSSXTMGSDSALVLLALFCALVCVLGLVVIARCVWLRRLTAAATTTTPPLPPPPPPNKGLKKKVLRSLPKLTYTADCTSKFTECAICLTEFASGDEIRELPQCGHGFHVACIDTWLRSHSSCPSCRQVPEISNKCHKCGGY 165

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000137556 (MDP0000137556)

HSP 1 Score: 125.946 bits (315), Expect = 1.738e-29
Identity = 63/91 (69.23%), Postives = 70/91 (76.92%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYT---ADCTSKF-TECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKGLKKK+L+SLPK TY    A+   K  +ECAICL EFA G EIR LPQCGH FHV CID WL SHSSCPSCRQI  V ++CHKCGGFP+
Sbjct:   79 NKGLKKKVLQSLPKFTYGTGGAEPPPKLGSECAICLGEFAEGHEIRVLPQCGHVFHVGCIDTWLGSHSSCPSCRQI-LVVARCHKCGGFPA 168

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000461119 (MDP0000461119)

HSP 1 Score: 125.561 bits (314), Expect = 2.270e-29
Identity = 63/91 (69.23%), Postives = 70/91 (76.92%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYT---ADCTSKF-TECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKGLKKK+L+SLPK TY    A+   K  +ECAICL EFA G EIR LPQCGH FHV CID WL SHSSCPSCRQI  V ++CHKCGGFP+
Sbjct:   79 NKGLKKKVLQSLPKFTYGSGGAEPPPKLGSECAICLGEFAEGHEIRILPQCGHVFHVGCIDTWLGSHSSCPSCRQI-LVVARCHKCGGFPA 168

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000195974 (MDP0000195974)

HSP 1 Score: 97.8265 bits (242), Expect = 5.070e-21
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHK 480
            ++GL + I+ SLP ++Y A+  ++  ECAICL EF  GD  R LP CGH FHV+C+D WLR HSSCPSCR        C+K
Sbjct:   74 DQGLXEMIICSLPSVSYNAEADARLAECAICLMEFVDGDVTRVLPHCGHGFHVSCVDRWLRCHSSCPSCRGSVVAEEGCYK 154

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000853517 (MDP0000853517)

HSP 1 Score: 92.4337 bits (228), Expect = 2.130e-19
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCT--SKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGF 492
            N G+KKK L++ P + Y+ +       TECAICL+EF AG+ +R LP+C H FHV CID WL SHSSCP CR    +   C K  G+
Sbjct:  115 NTGVKKKALKTFPTVNYSVELKLPGLDTECAICLSEFTAGERVRLLPKCNHGFHVRCIDKWLSSHSSCPKCRH--NLIETCQKIVGY 199

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000803911 (MDP0000803911)

HSP 1 Score: 91.6633 bits (226), Expect = 3.633e-19
Identity = 49/93 (52.69%), Postives = 60/93 (64.52%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTY----TADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            N GLKKK + +LP  TY    T   +S  + CAICL +F+ GD++R LP+C HRFHVACID WL  HSSCP+CR   + SS C      PSLS
Sbjct:   87 NSGLKKKEMVALPTSTYADSGTTSPSSSSSGCAICLADFSDGDKLRVLPKCNHRFHVACIDKWLLCHSSCPTCRHRLK-SSDC-----MPSLS 173

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000126653 (MDP0000126653)

HSP 1 Score: 90.5077 bits (223), Expect = 8.094e-19
Identity = 42/74 (56.76%), Postives = 51/74 (68.92%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTY----TADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            N GLKKK + +LP  TY    T   +S  + CAICL +F  GD++R LP+C HRFHVACID WL  HSSCP+CR
Sbjct:   81 NSGLKKKEMVALPTSTYADSGTTSPSSSSSGCAICLADFCDGDKLRVLPKCNHRFHVACIDKWLLCHSSCPTCR 154

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000166108 (MDP0000166108)

HSP 1 Score: 90.5077 bits (223), Expect = 8.094e-19
Identity = 42/74 (56.76%), Postives = 51/74 (68.92%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTY----TADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            N GLKKK + +LP  TY    T   +S  + CAICL +F  GD++R LP+C HRFHVACID WL  HSSCP+CR
Sbjct:   81 NSGLKKKEMVALPTSTYADSGTTSPSSSSSGCAICLADFCDGDKLRVLPKCNHRFHVACIDKWLLCHSSCPTCR 154

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000486156 (MDP0000486156)

HSP 1 Score: 87.8113 bits (216), Expect = 5.246e-18
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 1

Query:  244 GLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            GLKK  LR +P   Y +      TEC ICLTEF  G+++R LP+C H FHV CID W  SHSSCP+CR
Sbjct:   83 GLKKSHLRQIPIAVYGSGVNIPATECPICLTEFEDGEKVRVLPKCNHGFHVRCIDTWFLSHSSCPNCR 150

[Close]

BLAST of ppa012461m vs. GDR
Match: MDP0000220790 (MDP0000220790)

HSP 1 Score: 87.8113 bits (216), Expect = 5.246e-18
Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 1

Query:  244 GLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCR 447
            GLKK  LR +P   Y +      TEC ICLTEF  G+++R LP+C H FHV CID W  SHSSCP+CR
Sbjct:  155 GLKKSHLRQIPIAVYGSGVNIPATECPICLTEFEDGEKVRVLPKCNHGFHVRCIDTWFLSHSSCPNCR 222

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|359806958|ref|NP_001241583.1| (uncharacterized protein LOC100794614 [Glycine max] >gi|255645817|gb|ACU23399.1| unknown [Glycine max])

HSP 1 Score: 144.821 bits (364), Expect = 4.581e-33
Identity = 67/87 (77.01%), Postives = 74/87 (85.06%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKG+KKK+LRSLPKLT TA+   KF +CAICLTEFAAGDEIR LPQCGH FHV+CID WLRSHSSCPSCRQI  V S+C KCGG P+
Sbjct:   70 NKGVKKKVLRSLPKLTATAESAVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQI-LVVSRCDKCGGIPA 155

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|356517197|ref|XP_003527275.1| (PREDICTED: RING-H2 finger protein ATL80-like [Glycine max])

HSP 1 Score: 142.124 bits (357), Expect = 2.969e-32
Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKG+KKK+LRSLPK+T +A+   KF +CAICLTEFAAGDEIR LPQCGH FHV+CID WLRSHSSCPSCRQI  V S+C KCGG P+
Sbjct:   70 NKGVKKKVLRSLPKVTASAESAVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQI-LVVSRCDKCGGIPA 155

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|297839511|ref|XP_002887637.1| (hypothetical protein ARALYDRAFT_316562 [Arabidopsis lyrata subsp. lyrata] >gi|297333478|gb|EFH63896.1| hypothetical protein ARALYDRAFT_316562 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 141.354 bits (355), Expect = 5.065e-32
Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADC--TSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+LRSLPKLTY+ D     K  ECAICLTEFAAGDE+R LPQCGH FHV+CID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   75 NKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVARCHKCGGLPGSS 164

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|21555237|gb|AAM63811.1| (putative RING zinc finger protein [Arabidopsis thaliana])

HSP 1 Score: 141.354 bits (355), Expect = 5.065e-32
Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADC--TSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+LRSLPKLTY+ D     K  ECAICLTEFAAGDE+R LPQCGH FHV+CID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   75 NKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVTRCHKCGGLPGSS 164

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|15223041|ref|NP_177767.1| (RING-H2 finger protein ATL8 [Arabidopsis thaliana] >gi|68565205|sp|Q8LC69.2|ATL8_ARATH RecName: Full=RING-H2 finger protein ATL8 >gi|6554478|gb|AAF16660.1|AC012394_9 putative RING zinc finger protein; 36546-35989 [Arabidopsis thaliana] >gi|12323975|gb|AAG51946.1|AC015450_7 putative RING zinc finger protein; 5217-5774 [Arabidopsis thaliana] >gi|26452794|dbj|BAC43477.1| putative RING finger protein [Arabidopsis thaliana] >gi|28973309|gb|AAO63979.1| putative RING zinc finger protein [Arabidopsis thaliana] >gi|332197717|gb|AEE35838.1| RING-H2 finger protein ATL8 [Arabidopsis thaliana])

HSP 1 Score: 141.354 bits (355), Expect = 5.065e-32
Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADC--TSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+LRSLPKLTY+ D     K  ECAICLTEFAAGDE+R LPQCGH FHV+CID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   75 NKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVTRCHKCGGLPGSS 164

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|321149961|gb|ADW66128.1| (RING-H2 finger protein RHA3b [Solanum nigrum])

HSP 1 Score: 140.969 bits (354), Expect = 6.615e-32
Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+LRSLPK +YT++ ++KF+ECAICL EF  GDEIR LPQCGH FHV CID WL SHSSCPSCRQIP V S+CH CG  P  S
Sbjct:   29 NKGLKKKVLRSLPKFSYTSERSAKFSECAICLMEFVVGDEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQIP-VVSRCHMCGELPVTS 116

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|255539298|ref|XP_002510714.1| (protein with unknown function [Ricinus communis] >gi|223551415|gb|EEF52901.1| protein with unknown function [Ricinus communis])

HSP 1 Score: 140.198 bits (352), Expect = 1.128e-31
Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            NKGLKKKILRSLPK T++AD T KF +CAICL EFA GDEIR LPQCGH FHV+CID WL SHSSCPSCRQI  V ++C KCGG P+
Sbjct:   87 NKGLKKKILRSLPKQTFSADSTPKFYDCAICLAEFAPGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVARCQKCGGLPA 172

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|357467153|ref|XP_003603861.1| (RING-H2 finger protein ATL1B [Medicago truncatula] >gi|355492909|gb|AES74112.1| RING-H2 finger protein ATL1B [Medicago truncatula])

HSP 1 Score: 140.198 bits (352), Expect = 1.128e-31
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFP 495
            NKG+KKK+LRSLPKLT T +   KF++CAICL+EF AGDEIR LPQCGH FHV+CID+WLRSHSSCPSCRQI  V S+C KCGG P
Sbjct:   77 NKGVKKKVLRSLPKLTATEESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQI-LVVSRCDKCGGIP 161

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|117667934|gb|ABK56013.1| (zinc finger protein [Brassica rapa])

HSP 1 Score: 140.198 bits (352), Expect = 1.128e-31
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 1

Query:  238 NKGLKKKILRSLPKLTYTADCTS--KFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPSLS 504
            NKGLKKK+L+SLPKLT++ D  S  KFTECAICLTEF+ GDE+R LPQCGH FHV+CID WL SHSSCPSCRQI  V ++CHKCGG P  S
Sbjct:   85 NKGLKKKVLQSLPKLTFSPDSPSSEKFTECAICLTEFSNGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVARCHKCGGLPGSS 174

[Close]

BLAST of ppa012461m vs. NCBI nr
Match: gi|224065651|ref|XP_002301903.1| (predicted protein [Populus trichocarpa] >gi|222843629|gb|EEE81176.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 139.813 bits (351), Expect = 1.474e-31
Identity = 74/166 (44.58%), Postives = 87/166 (52.41%), Query Frame = 1

Query:    1 MTRPLRLLGGAFNPPALFSEPDDESSANMGSDSXXXXXXXXXXXXXXXXXXXXXXXXWXXXXXXXXXXXXXXXXXXXXXNKGLKKKILRSLPKLTYTADCTSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQIPEVSSKCHKCGGFPS 498
            M RP   L    N  A  +    ++SA + SD                         W                     NKGLKKK+LRSLPK T++ D + K  +CAICLTEF+AGDEIR LPQCGH FHV+CID WL SHSSCPSCRQI  V ++C KCGG PS
Sbjct:    1 MARPFSFLNAVANSSATTTGSPPQASATVDSDFMVILAALLCALICVLGLIAVARCAWLRRFSSRNPTPPVPPPPPSVANKGLKKKVLRSLPKQTFSEDFSGKLPDCAICLTEFSAGDEIRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQI-LVVARCQKCGGLPS 165

The following BLAST results are available for this feature:

BLAST of ppa012461m vs. Vitis vinifera
BLAST of ppa012461m vs. ExPASy TrEMBL
BLAST of ppa012461m vs. ExPASy Swiss-Prot
BLAST of ppa012461m vs. TAIR10
BLAST of ppa012461m vs. Populus trichicarpa v2.0
BLAST of ppa012461m vs. GDR
BLAST of ppa012461m vs. NCBI nr

BLAST of ppa012461m vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Vitis vinifera)
Total hits: 25


Match Name	E-value	Identity	Description
GSVIVT01022306001	1.026e-32	69.66	assembled CDS	[more]
GSVIVT01032684001	7.137e-18	54.41	assembled CDS	[more]
GSVIVT01016661001	1.346e-16	46.05	assembled CDS	[more]
GSVIVT01024698001	8.725e-16	50.72	assembled CDS	[more]
GSVIVT01028038001	2.539e-15	42.68	assembled CDS	[more]
GSVIVT01037142001	4.330e-15	41.18	assembled CDS	[more]
GSVIVT01026703001	2.149e-14	44.93	assembled CDS	[more]
GSVIVT01023776001	2.149e-14	47.83	assembled CDS	[more]
GSVIVT01005189001	2.149e-14	41.89	assembled CDS	[more]
GSVIVT01016564001	2.807e-14	65.12	assembled CDS	[more]

Pages

BLAST of ppa012461m vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
C6TKF9_SOYBN	5.212e-33	77.01	Uncharacterized protein OS=Glycine max GN=Gma.3720...	[more]
I1K799_SOYBN	3.378e-32	74.71	Uncharacterized protein OS=Glycine max GN=Gma.2789...	[more]
D7KTT0_ARALL	5.762e-32	73.63	Putative uncharacterized protein OS=Arabidopsis ly...	[more]
F2VPP7_SOLNI	7.526e-32	71.91	RING-H2 finger protein RHA3b (Fragment) OS=Solanum...	[more]
G7J5Z4_MEDTR	1.284e-31	74.42	RING-H2 finger protein ATL1B OS=Medicago truncatul...	[more]
B9R8S1_RICCO	1.284e-31	74.71	Putative uncharacterized protein OS=Ricinus commun...	[more]
A0MZQ0_BRACM	1.284e-31	72.53	Zinc finger protein OS=Brassica campestris PE=2 SV...	[more]
B9GPP9_POPTR	1.677e-31	44.58	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9H5V1_POPTR	2.860e-31	73.56	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
F6I6U9_VITVI	1.419e-30	70.79	Putative uncharacterized protein OS=Vitis vinifera...	[more]

Pages

BLAST of ppa012461m vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot)
Total hits: 25


Match Name	E-value	Identity	Description
ATL8_ARATH	2.468e-33	73.63	RING-H2 finger protein ATL8 OS=Arabidopsis thalian...	[more]
ATL80_ARATH	3.564e-32	70.33	RING-H2 finger protein ATL80 OS=Arabidopsis thalia...	[more]
ATL45_ARATH	3.024e-23	57.58	RING-H2 finger protein ATL45 OS=Arabidopsis thalia...	[more]
ATL44_ARATH	1.960e-22	60.44	RING-H2 finger protein ATL44 OS=Arabidopsis thalia...	[more]
ATL73_ARATH	2.243e-18	54.29	RING-H2 finger protein ATL73 OS=Arabidopsis thalia...	[more]
ATL74_ARATH	2.742e-16	55.07	RING-H2 finger protein ATL74 OS=Arabidopsis thalia...	[more]
ATL78_ARATH	4.676e-16	44.57	RING-H2 finger protein ATL78 OS=Arabidopsis thalia...	[more]
ATL77_ARATH	4.676e-16	48.61	RING-H2 finger protein ATL77 OS=Arabidopsis thalia...	[more]
ATL10_ARATH	4.676e-16	48.61	RING-H2 finger protein ATL10 OS=Arabidopsis thalia...	[more]
ATL76_ARATH	7.977e-16	48.61	E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis t...	[more]

Pages

BLAST of ppa012461m vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs TAIR 10)
Total hits: 25


Match Name	E-value	Identity	Description
AT1G76410.1	2.653e-34	73.63	\| Symbols: ATL8 \| RING/U-box superfamily protein \|...	[more]
AT1G20823.1	3.830e-33	70.33	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT4G35480.1	3.250e-24	57.58	\| Symbols: RHA3B \| RING-H2 finger A3B \| chr4:16852...	[more]
AT2G17450.1	2.107e-23	60.44	\| Symbols: RHA3A \| RING-H2 finger A3A \| chr2:75766...	[more]
AT5G05280.1	2.410e-19	54.29	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT5G01880.1	2.946e-17	55.07	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT3G18773.1	5.026e-17	48.61	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G49220.1	5.026e-17	48.61	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G49230.1	5.026e-17	44.57	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]
AT1G49210.1	8.573e-17	48.61	\| Symbols: \| RING/U-box superfamily protein \| chr...	[more]

Pages

BLAST of ppa012461m vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0)
Total hits: 25


Match Name	E-value	Identity
POPTR_0005s27660.1	2.299e-34	45.78	[more]
POPTR_0002s00780.1	8.735e-34	44.58	[more]
POPTR_0007s08550.1	1.596e-27	60.82	[more]
POPTR_0005s10190.1	1.596e-27	64.13	[more]
POPTR_0019s02610.1	1.108e-20	49.46	[more]
POPTR_0001s31720.1	1.354e-18	47.31	[more]
POPTR_0016s14320.1	1.768e-18	57.35	[more]
POPTR_0019s15050.1	2.309e-18	46.34	[more]
POPTR_0001s15930.1	3.939e-18	57.75	[more]
POPTR_0001s31710.1	6.719e-18	46.51	[more]

Pages

BLAST of ppa012461m vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0)
Total hits: 25


Match Name	E-value	Identity	Description
MDP0000864704	2.493e-52	61.45	MDP0000864704	[more]
MDP0000137556	1.738e-29	69.23	MDP0000137556	[more]
MDP0000461119	2.270e-29	69.23	MDP0000461119	[more]
MDP0000195974	5.070e-21	51.85	MDP0000195974	[more]
MDP0000853517	2.130e-19	49.43	MDP0000853517	[more]
MDP0000803911	3.633e-19	52.69	MDP0000803911	[more]
MDP0000126653	8.094e-19	56.76	MDP0000126653	[more]
MDP0000166108	8.094e-19	56.76	MDP0000166108	[more]
MDP0000486156	5.246e-18	55.88	MDP0000486156	[more]
MDP0000220790	5.246e-18	55.88	MDP0000220790	[more]

Pages

BLAST of ppa012461m vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs NCBI nr )
Total hits: 25


Match Name	E-value	Identity	Description
gi\|359806958\|ref\|NP_001241583.1\|	4.581e-33	77.01	uncharacterized protein LOC100794614 [Glycine max]...	[more]
gi\|356517197\|ref\|XP_003527275.1\|	2.969e-32	74.71	PREDICTED: RING-H2 finger protein ATL80-like [Glyc...	[more]
gi\|297839511\|ref\|XP_002887637.1\|	5.065e-32	73.63	hypothetical protein ARALYDRAFT_316562 [Arabidopsi...	[more]
gi\|21555237\|gb\|AAM63811.1\|	5.065e-32	73.63	putative RING zinc finger protein [Arabidopsis tha...	[more]
gi\|15223041\|ref\|NP_177767.1\|	5.065e-32	73.63	RING-H2 finger protein ATL8 [Arabidopsis thaliana]...	[more]
gi\|321149961\|gb\|ADW66128.1\|	6.615e-32	71.91	RING-H2 finger protein RHA3b [Solanum nigrum]	[more]
gi\|255539298\|ref\|XP_002510714.1\|	1.128e-31	74.71	protein with unknown function [Ricinus communis] >...	[more]
gi\|357467153\|ref\|XP_003603861.1\|	1.128e-31	74.42	RING-H2 finger protein ATL1B [Medicago truncatula]...	[more]
gi\|117667934\|gb\|ABK56013.1\|	1.128e-31	72.53	zinc finger protein [Brassica rapa]	[more]
gi\|224065651\|ref\|XP_002301903.1\|	1.474e-31	44.58	predicted protein [Populus trichocarpa] >gi\|222843...	[more]

Pages

InterPro

Analysis Name: InterProScan of Prunus persica Whole Genome v1.0
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	Ring finger	coord: 107..148 score: 1.9
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 107..149 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 103..150 score: 2.5
None	No IPR available	PANTHER	PTHR22764	FAMILY NOT NAMED	coord: 23..168 score: 1.7
None	No IPR available	PANTHER	PTHR22764:SF16	ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEIN	coord: 23..168 score: 1.7
None	No IPR available	PFAM	PF13639	zf-RING_2	coord: 106..150 score: 4.9
None	No IPR available	SEG	seg	seg	coord: 34..57 score: NAcoord: 59..79 score
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 80..155 score: 2.6
None	No IPR available	SEG	seg	seg	coord: 19..33 score: NAcoord: 42..53 score: NAcoord: 60..73 score
None	No IPR available	SEG	seg	seg	coord: 7..39 score: NAcoord: 45..55 score: NAcoord: 80..105 score
None	No IPR available	SEG	seg	seg	coord: 53..70 score
None	No IPR available	COIL	coil	coiled-coil	coord: 32..53 score
None	No IPR available	SEG	seg	seg	coord: 9..20 score: NAcoord: 26..52 score
None	No IPR available	SEG	seg	seg	coord: 15..26 score: NAcoord: 32..64 score
None	No IPR available	SEG	seg	seg	coord: 17..59 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_5:740825..741418-
coding sequence from alignment at scaffold_5:740825..741418-

mRNA sequence

>ppa012461m ID=ppa012461m; Name=ppa012461m; organism=Prunus persica; type=mRNA; length=594bp
CGACCAAAACCCAAATCACTCACTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCACCAAATTCACATTCATTCACAAAACATGACTCGTCCTC
TGCGACTGTTAGGCGGCGCCTTTAACCCTCCCGCGCTGTTTTCCGAACCC
GACGATGAATCGTCAGCCAACATGGGCTCCGACTCCGCTTTGATCCTCCT
CGCCCTCTTCTGCGCTCTCGTCTGCGTCCTCGGCCTCCTCGTCGTGGCTC
GCTGCGTCTGGCTCCGCCGCCTCGCAACCGCTGCCACACCTCCTCCTCCT
CCTCCGCTGCCGACTCCTCCGCCGAACAAGGGGTTGAAGAAGAAAATCCT
ACGCTCACTCCCGAAGCTCACTTACACGGCGGACTGCACTTCCAAGTTCA
CCGAGTGCGCCATCTGCCTCACCGAGTTCGCCGCCGGAGACGAGATCCGG
GAGCTGCCGCAGTGCGGCCACCGCTTCCACGTGGCTTGCATCGACGTATG
GCTGCGATCGCACTCGTCCTGCCCCTCCTGCCGTCAGATTCCGGAGGTTT
CCAGTAAGTGCCACAAGTGTGGCGGCTTCCCTTCTCTTTCTTAA

protein sequence of ppa012461m

>ppa012461m ID=ppa012461m; Name=ppa012461m; organism=Prunus persica; type=polypeptide; length=169bp
MTRPLRLLGGAFNPPALFSEPDDESSANMGSDSALILLALFCALVCVLGL
LVVARCVWLRRLATAATPPPPPPLPTPPPNKGLKKKILRSLPKLTYTADC
TSKFTECAICLTEFAAGDEIRELPQCGHRFHVACIDVWLRSHSSCPSCRQ
IPEVSSKCHKCGGFPSLS*

mRNA from alignment at scaffold_5:740825..741418-

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>ppa012461m ID=ppa012461m; Name=ppa012461m; organism=Prunus persica; type=mRNA; length=594bp; location=Sequence derived from: scaffold_5:740825..741418- (Prunus persica
CGACCAAAACCCAAATCACTCACTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCACCAAATTCACATTCATTCACAAAACATGACTCGTCCTC
TGCGACTGTTAGGCGGCGCCTTTAACCCTCCCGCGCTGTTTTCCGAACCC
GACGATGAATCGTCAGCCAACATGGGCTCCGACTCCGCTTTGATCCTCCT
CGCCCTCTTCTGCGCTCTCGTCTGCGTCCTCGGCCTCCTCGTCGTGGCTC
GCTGCGTCTGGCTCCGCCGCCTCGCAACCGCTGCCACACCTCCTCCTCCT
CCTCCGCTGCCGACTCCTCCGCCGAACAAGGGGTTGAAGAAGAAAATCCT
ACGCTCACTCCCGAAGCTCACTTACACGGCGGACTGCACTTCCAAGTTCA
CCGAGTGCGCCATCTGCCTCACCGAGTTCGCCGCCGGAGACGAGATCCGG
GAGCTGCCGCAGTGCGGCCACCGCTTCCACGTGGCTTGCATCGACGTATG
GCTGCGATCGCACTCGTCCTGCCCCTCCTGCCGTCAGATTCCGGAGGTTT
CCAGTAAGTGCCACAAGTGTGGCGGCTTCCCTTCTCTTTCTTAA

Coding sequence (CDS) from alignment at scaffold_5:740825..741418-

>ppa012461m ID=ppa012461m; Name=ppa012461m; organism=Prunus persica; type=CDS; length=507bp; location=Sequence derived from: scaffold_5:740825..741418- (Prunus persica
ATGACTCGTCCTCTGCGACTGTTAGGCGGCGCCTTTAACCCTCCCGCGCT
GTTTTCCGAACCCGACGATGAATCGTCAGCCAACATGGGCTCCGACTCCG
CTTTGATCCTCCTCGCCCTCTTCTGCGCTCTCGTCTGCGTCCTCGGCCTC
CTCGTCGTGGCTCGCTGCGTCTGGCTCCGCCGCCTCGCAACCGCTGCCAC
ACCTCCTCCTCCTCCTCCGCTGCCGACTCCTCCGCCGAACAAGGGGTTGA
AGAAGAAAATCCTACGCTCACTCCCGAAGCTCACTTACACGGCGGACTGC
ACTTCCAAGTTCACCGAGTGCGCCATCTGCCTCACCGAGTTCGCCGCCGG
AGACGAGATCCGGGAGCTGCCGCAGTGCGGCCACCGCTTCCACGTGGCTT
GCATCGACGTATGGCTGCGATCGCACTCGTCCTGCCCCTCCTGCCGTCAG
ATTCCGGAGGTTTCCAGTAAGTGCCACAAGTGTGGCGGCTTCCCTTCTCT
TTCTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding