ppa013208m, ppa013208m (mRNA) Prunus persica

Transcript Overview


Name	ppa013208m
Unique Name	ppa013208m
Type	mRNA
Organism	Prunus persica (Peach)
Sequence length	787

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
scaffold_1	supercontig	scaffold_1:12800877..12803755 +	Prunus persica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Prunus persica Whole Genome v1.0 Assembly & Annotation	2012-01-16
InterProScan of Prunus persica Whole Genome v1.0	2012-07-23
BLASTx of Prunus persica v1.0 vs Vitis vinifera	2012-07-23
BLASTx of Prunus persica v1.0 vs UniProt TrEMBL	2012-07-23
BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot	2012-07-23
BLASTx of Prunus persica v1.0 vs TAIR 10	2012-07-23
BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0	2012-07-23
BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0	2012-07-23
BLASTx of Prunus persica v1.0 vs NCBI nr	2012-07-23

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ppa013208m.g	ppa013208m.g	Prunus persica	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ppa013208m.five_prime_UTR.1	ppa013208m.five_prime_UTR.1	Prunus persica	five_prime_UTR
ppa013208m.five_prime_UTR.2	ppa013208m.five_prime_UTR.2	Prunus persica	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ppa013208m.CDS.1	ppa013208m.CDS.1	Prunus persica	CDS
ppa013208m.CDS.2	ppa013208m.CDS.2	Prunus persica	CDS
ppa013208m.CDS.3	ppa013208m.CDS.3	Prunus persica	CDS
ppa013208m.CDS.4	ppa013208m.CDS.4	Prunus persica	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
ppa013208m.three_prime_UTR.1	ppa013208m.three_prime_UTR.1	Prunus persica	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
ppa013208m	ppa013208m	Prunus persica	polypeptide

Cross References

External references for this mRNA


Database	Accession
"Phytozome_pacid	17658959"

Homology

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01021024001 (assembled CDS)

HSP 1 Score: 171.014 bits (432), Expect = 1.381e-43
Identity = 89/120 (74.17%), Postives = 103/120 (85.83%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQN----GQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAFCN+ G+LLR SISQN    GQ  M ++LN+ RCMSS KLFIGGLS+GT D+SLK+AFSSFGDV EARVI DR+TG+SRGFGFV+F SD+SASSAL+AMDGQEL+GRNIRVS A ERT
Sbjct:    1 MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANERT 120

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01007865001 (assembled CDS)

HSP 1 Score: 134.035 bits (336), Expect = 1.871e-32
Identity = 71/119 (59.66%), Postives = 91/119 (76.47%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQ--NGQAPMA--SMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF  KVG++LR ++S+  N Q  ++  S+  A RCMSS KLFIGGLS+ T D SL+EAF  +G+V EARVI+DR TG+SRGFGFV F S E ASSA+ A+DGQ+LHGR +RV+ AT+R
Sbjct:    1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01033897001 (assembled CDS)

HSP 1 Score: 94.3597 bits (233), Expect = 1.643e-20
Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MA   ++G     ++S +   P A +L   R ++SKLF+GGLSF T+++ L E FS +G V EA+++MDR + +S+GFGFV FAS+E A  A   MDG+EL+GR I V  A  R
Sbjct:    1 MAAFARIGRRNLTNLSPSFLLPPA-LLICCRGIASKLFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKARTEMDGKELNGRTIFVDYAKPR 113

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01030490001 (assembled CDS)

HSP 1 Score: 93.2041 bits (230), Expect = 3.659e-20
Identity = 44/81 (54.32%), Postives = 63/81 (77.78%), Query Frame = 1

Query:  100 SSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            ++KLF+ GLS+   ++SLK+AFSSFGDVTE R++ D+++G+SRGFGFV F+ +  A SA +AMDG+   GR +RVS A E+
Sbjct:   37 NTKLFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKDAMDGKAFLGRPLRVSYALEK 117

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01031973001 (assembled CDS)

HSP 1 Score: 92.4337 bits (228), Expect = 6.242e-20
Identity = 41/79 (51.90%), Postives = 59/79 (74.68%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            + F+GGL++ T D+SL+ AFS FG++ E+++I DR TG+SRGFGFV F+S++S   A+  M+GQ L GRNI V+ A  R
Sbjct:    9 RCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQSR 87

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01038128001 (assembled CDS)

HSP 1 Score: 85.8853 bits (211), Expect = 5.842e-18
Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 1

Query:  106 KLFIG--GLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTA 333
            KLFIG  GLS+ T++  LK+AF  +G++ E +VI D  +GKS+G+GFV F SD+ A  AL  MDGQ L GRNIRV+ A
Sbjct:   28 KLFIGDAGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYA 105

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01001672001 (assembled CDS)

HSP 1 Score: 83.1889 bits (204), Expect = 3.787e-17
Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTA 333
            + FIGGLS+ TSD SLKEAF  FG + EA+V++D+ +G+SRGFGFV F   ++   A+  M G +L GR+I V  A
Sbjct:    8 RCFIGGLSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKEMHGMDLDGRSITVDKA 83

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01032361001 (assembled CDS)

HSP 1 Score: 78.1814 bits (191), Expect = 1.218e-15
Identity = 37/81 (45.68%), Postives = 54/81 (66.67%), Query Frame = 1

Query:  100 SSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            S ++++G L +   D  L++ FS  G V +ARV+ DR+T +SRGFGFV  +S+   + A+ A+DGQ L GR IRV+ A ER
Sbjct:  186 SFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEER 266

HSP 2 Score: 58.5362 bits (140), Expect = 9.988e-10
Identity = 30/80 (37.50%), Postives = 45/80 (56.25%), Query Frame = 1

Query:  103 SKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            +KLF+G L +    E L + F   G V  A VI +R T +SRGFGF+  ++ E A  A+   +  +L+GR + V+ A  R
Sbjct:   93 AKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPR 172

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01007596001 (assembled CDS)

HSP 1 Score: 77.7962 bits (190), Expect = 1.591e-15
Identity = 37/79 (46.84%), Postives = 49/79 (62.03%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            ++++G L +      L++ FS  G V EARV+ DR TG+SRGFGFV  +S      A+ A DGQ L GR IRV+ A ER
Sbjct:  222 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEER 300

HSP 2 Score: 57.7658 bits (138), Expect = 1.704e-9
Identity = 31/80 (38.75%), Postives = 43/80 (53.75%), Query Frame = 1

Query:  103 SKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            +K+F+G L +    E L   F   G V  A VI +R T +SRGFGFV  ++ E A  A++     EL GR + V+ A  R
Sbjct:  127 AKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPR 206

[Close]

BLAST of ppa013208m vs. Vitis vinifera
Match: GSVIVT01036082001 (assembled CDS)

HSP 1 Score: 77.0258 bits (188), Expect = 2.714e-15
Identity = 36/89 (40.45%), Postives = 59/89 (66.29%), Query Frame = 1

Query:   67 MASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTA 333
            ++S L   R ++S LF+ G+SF T++++L EAFS FG+V EA++IMD+   + +GF +V F  ++ A  AL  M+G+ + GR + V  A
Sbjct:   22 LSSQLIFCRGIASTLFVKGISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKALTEMNGKVVDGRTVLVDYA 110

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: B9S9Z2_RICCO (Glycine-rich RNA-binding protein, putative OS=Ricinus communis GN=RCOM_0523760 PE=4 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.262e-43
Identity = 88/115 (76.52%), Postives = 105/115 (91.30%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+GSL+R S++QNG+ P++SMLN+ RCMSS KLFIGGLS+GT+D+SLK+AFS FGDV  ARVI DR+TG+SRGFGFVDF+S +SASSAL+AMDGQELHGRNIRVS ATER
Sbjct:    1 MAFCNKIGSLVRQSVAQNGKVPVSSMLNSIRCMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAMDGQELHGRNIRVSYATER 115

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: A5C101_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0029g00440 PE=4 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.803e-41
Identity = 89/120 (74.17%), Postives = 103/120 (85.83%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQN----GQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAFCN+ G+LLR SISQN    GQ  M ++LN+ RCMSS KLFIGGLS+GT D+SLK+AFSSFGDV EARVI DR+TG+SRGFGFV+F SD+SASSAL+AMDGQEL+GRNIRVS A ERT
Sbjct:    1 MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANERT 120

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: A9P9S1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_836867 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.875e-39
Identity = 84/115 (73.04%), Postives = 98/115 (85.22%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF NK GSL+R S+SQNGQ PMASMLN+ RCMSS KLFIGGL++ T D+SLK+AFS FG+VTEARVI DR+TG+SRGFGFV + S ESAS AL+AMDGQEL GRNIRV  AT++
Sbjct:    1 MAFFNKFGSLVRQSVSQNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDK 115

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: Q3HVL3_SOLTU (RNA binding protein-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.494e-37
Identity = 77/118 (65.25%), Postives = 97/118 (82.20%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQA----PMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+G LLR SIS    A    P  +MLNA RCMSS+LF+GGLS+GT D+SLKEAF+SFGDV +A+VI+DR++G+SRGFGFV+F+ ++ A  A+NAMDGQ+LHGRNIRV+ A ER
Sbjct:    1 MAFCNKLGGLLRQSISTGNAASANSPTPAMLNAIRCMSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQLHGRNIRVNLAQER 118

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: P93486_PEA (Glycine-rich RNA-binding protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.959e-37
Identity = 79/115 (68.70%), Postives = 99/115 (86.09%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+G+LLR   +Q+  AP++SMLN  R MSS KLFIGGLS+G  D+SLK+AF+S+G+V EARVI DR+TG+SRGFGFV+F SDESA+SAL+AMDGQ+L+GRNIRVS A +R
Sbjct:    1 MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDR 115

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: C6T3N5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.328e-36
Identity = 77/115 (66.96%), Postives = 100/115 (86.96%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNKVG++LR   +++ QAP++SMLN  RCMSS KLFIGGLS+G  D+SLK+AFS FGDV +A+VI DR++G+SRGFGFV+F++DESASSAL+AMDG++L GR+IRVS A +R
Sbjct:    1 MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDR 115

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: C6SXA0_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.55194 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.958e-36
Identity = 76/115 (66.09%), Postives = 100/115 (86.96%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNKVG++LR   +++  AP+ASMLN  RCMSS KLFIGGLS+G  D+SLK+AFS FGDV +A+VI DR++G+SRGFGFV+F++DESASSAL+AMDG++L+GR+IRVS A ++
Sbjct:    1 MAFCNKVGNVLRQGAARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYANDK 115

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: C6KF85_9CARY (Putative glycine-rich RNA-binding protein OS=Tamarix hispida GN=GRP1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.958e-36
Identity = 77/116 (66.38%), Postives = 101/116 (87.07%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAFCN++GSL+R ++SQN  AP+ SMLN+ RCMSS +LF+GGLS+GT D+SLK+AFSSFG+VT+A+VI DR TG+SRGFGFV+F  +E+A SAL++MDG EL+GR+IRVS A ER+
Sbjct:    1 MAFCNRIGSLIRQTVSQNS-APIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQERS 115

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: O23793_NICSY (RNA binding protein OS=Nicotiana sylvestris GN=RGP-3 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.863e-36
Identity = 77/117 (65.81%), Postives = 97/117 (82.91%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNG---QAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF NK+G LLR SIS N     +PM SML+A RCMS+KLF+GGLS+GT D+SL++AF++FGDV +ARVI+DR++G+SRGFGFV+F+ DE A+ A+ AMDGQEL GRNIRVS A ER
Sbjct:    1 MAFYNKLGGLLRQSISGNAVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQER 117

[Close]

BLAST of ppa013208m vs. ExPASy TrEMBL
Match: D6PZY8_TOBAC (RNA-binding glycine-rich protein OS=Nicotiana tabacum GN=RGP-3 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.863e-36
Identity = 77/117 (65.81%), Postives = 97/117 (82.91%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNG---QAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF NK+G LLR SIS N     +PM SML+A RCMS+KLF+GGLS+GT D+SL++AF++FGDV +ARVI+DR++G+SRGFGFV+F+ DE A+ A+ AMDGQEL GRNIRVS A ER
Sbjct:    1 MAFYNKLGGLLRQSISGNAVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQER 117

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: GRP2_ARATH (Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 2.074e-35
Identity = 69/114 (60.53%), Postives = 94/114 (82.46%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+G LLR +IS NG  P+ SML + R MS+KLFIGGLS+GT D SL++AF+ FGDV +A+VI+DR TG+SRGFGFV+F  + +A++A++ MDG+EL+GR+IRV+ A +R
Sbjct:    1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: RT19_ARATH (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana GN=RPS19 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.716e-27
Identity = 61/113 (53.98%), Postives = 87/113 (76.99%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATE 339
            MAFC K+G   +  ++     P++SML + R MS+KL+IGGLS GT + SLK+AFSSF  VTEARV+ ++ TG+SRG+GFV+F S++SA+SA++AM+GQEL+G NI V+ A +
Sbjct:    1 MAFCTKLGGHWKQGVN----VPVSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKD 109

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.199e-20
Identity = 44/79 (55.70%), Postives = 60/79 (75.95%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            + F+GGL + T D+SL+ AFS +GDV ++++I DR TG+SRGFGFV FASDE+   A+ AM+GQ+L GRNI V+ A  R
Sbjct:    7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 4.199e-20
Identity = 43/79 (54.43%), Postives = 61/79 (77.22%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            + F+GGL++ T+DESL++AFS FGD+T++++I DR TG+SRGFGFV F  ++S   A+  M+GQEL GRNI V+ A  R
Sbjct:    7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQSR 85

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.351e-18
Identity = 43/86 (50.00%), Postives = 64/86 (74.42%), Query Frame = 1

Query:   85 AARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            AA  +  + F+GGL++ TS+ESL+ AF+S+G++ +++VI DR TG+SRGFGFV F+S+ S   A+  M+G+EL GRNI V+ A  R
Sbjct:    2 AAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSR 87

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.009e-18
Identity = 42/86 (48.84%), Postives = 65/86 (75.58%), Query Frame = 1

Query:   85 AARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            AA  +  + F+GGL++ T++E+L++AF++FG V +++VI DR TG+SRGFGFV F+S++S   A+  M+G+EL GRNI V+ A  R
Sbjct:    2 AAADVEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQSR 87

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: RBM3_MOUSE (Putative RNA-binding protein 3 OS=Mus musculus GN=Rbm3 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.548e-17
Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTA 333
            KLF+GGL+F T +++L++ FSSFG ++E  V+ DR T +SRGFGF+ F + E AS A+ AM+G+ L GR IRV  A
Sbjct:    7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGRQIRVDHA 82

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: ROC2_NICSY (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.346e-17
Identity = 38/81 (46.91%), Postives = 63/81 (77.78%), Query Frame = 1

Query:  100 SSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            S+++++G LS+G  D +LKE FS  G+V +A+V+ DR++G+SRGFGFV ++S +  + A+++++G +L GR+IRVS A ER
Sbjct:  206 SNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEER 286

HSP 2 Score: 61.2326 bits (147), Expect = 1.955e-9
Identity = 31/74 (41.89%), Postives = 42/74 (56.76%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVS 327
            KLF+G L F     +L   F   G+V    VI D+ TG+SRGFGFV  ++ E   +A    +G E+ GR IRV+
Sbjct:   88 KLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVN 161

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: RBM3_HUMAN (Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.346e-17
Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTA 333
            KLF+GGL+F T +++L++ FSSFG ++E  V+ DR T +SRGFGF+ F + E AS A+ AM+G+ L GR IRV  A
Sbjct:    7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82

[Close]

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Match: RBM3_RAT (Putative RNA-binding protein 3 OS=Rattus norvegicus GN=Rbm3 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 7.412e-17
Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTA 333
            KLF+GGL+F T +++L++ FSSFG ++E  V+ DR T +SRGFGF+ F + E AS  + AM+G+ L GR IRV  A
Sbjct:    7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESLDGRQIRVDHA 82

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT3G23830.2 (| Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136)

HSP 1 Score: 150.599 bits (379), Expect = 2.671e-37
Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAFCNK+  +LR  +SQ+   P+ SML + R MSSKLF+GGLS+GT D SLK+AF+SFG+VTEA VI DR TG+SRGFGFV F+ ++SA++A+  MDG+EL+GR IRV+ ATER+
Sbjct:    1 MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERS 115

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT3G23830.1 (| Symbols: GR-RBP4, GRP4 | glycine-rich RNA-binding protein 4 | chr3:8606762-8607677 REVERSE LENGTH=136)

HSP 1 Score: 150.599 bits (379), Expect = 2.671e-37
Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAFCNK+  +LR  +SQ+   P+ SML + R MSSKLF+GGLS+GT D SLK+AF+SFG+VTEA VI DR TG+SRGFGFV F+ ++SA++A+  MDG+EL+GR IRV+ ATER+
Sbjct:    1 MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERS 115

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT4G13850.4 (| Symbols: ATGRP2 | glycine-rich RNA-binding protein 2 | chr4:8021314-8022065 FORWARD LENGTH=129)

HSP 1 Score: 147.517 bits (371), Expect = 2.261e-36
Identity = 69/114 (60.53%), Postives = 94/114 (82.46%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+G LLR +IS NG  P+ SML + R MS+KLFIGGLS+GT D SL++AF+ FGDV +A+VI+DR TG+SRGFGFV+F  + +A++A++ MDG+EL+GR+IRV+ A +R
Sbjct:    1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT4G13850.3 (| Symbols: ATGRP2 | glycine-rich RNA-binding protein 2 | chr4:8021314-8022065 FORWARD LENGTH=144)

HSP 1 Score: 147.517 bits (371), Expect = 2.261e-36
Identity = 69/114 (60.53%), Postives = 94/114 (82.46%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+G LLR +IS NG  P+ SML + R MS+KLFIGGLS+GT D SL++AF+ FGDV +A+VI+DR TG+SRGFGFV+F  + +A++A++ MDG+EL+GR+IRV+ A +R
Sbjct:    1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT4G13850.2 (| Symbols: ATGRP2 | glycine-rich RNA-binding protein 2 | chr4:8021314-8022065 FORWARD LENGTH=153)

HSP 1 Score: 147.517 bits (371), Expect = 2.261e-36
Identity = 69/114 (60.53%), Postives = 94/114 (82.46%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+G LLR +IS NG  P+ SML + R MS+KLFIGGLS+GT D SL++AF+ FGDV +A+VI+DR TG+SRGFGFV+F  + +A++A++ MDG+EL+GR+IRV+ A +R
Sbjct:    1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT4G13850.1 (| Symbols: ATGRP2, GR-RBP2, GRP2 | glycine-rich RNA-binding protein 2 | chr4:8021314-8022065 FORWARD LENGTH=158)

HSP 1 Score: 147.517 bits (371), Expect = 2.261e-36
Identity = 69/114 (60.53%), Postives = 94/114 (82.46%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+G LLR +IS NG  P+ SML + R MS+KLFIGGLS+GT D SL++AF+ FGDV +A+VI+DR TG+SRGFGFV+F  + +A++A++ MDG+EL+GR+IRV+ A +R
Sbjct:    1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT5G61030.1 (| Symbols: GR-RBP3 | glycine-rich RNA-binding protein 3 | chr5:24560870-24562152 FORWARD LENGTH=309)

HSP 1 Score: 121.709 bits (304), Expect = 1.329e-28
Identity = 60/120 (50.00%), Postives = 91/120 (75.83%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQ--NGQAPMAS--MLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAF +K G++L+ + ++  N Q  ++S  +  A RCMSS KLFIGG+++   ++SL+EAF+ +G+V + RVI+DR TG+SRGFGFV F S E+ASSA+ A+DG++LHGR ++V+ A +RT
Sbjct:    1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRT 120

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT5G47320.1 (| Symbols: RPS19 | ribosomal protein S19 | chr5:19203801-19204951 FORWARD LENGTH=212)

HSP 1 Score: 120.553 bits (301), Expect = 2.960e-28
Identity = 61/113 (53.98%), Postives = 87/113 (76.99%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATE 339
            MAFC K+G   +  ++     P++SML + R MS+KL+IGGLS GT + SLK+AFSSF  VTEARV+ ++ TG+SRG+GFV+F S++SA+SA++AM+GQEL+G NI V+ A +
Sbjct:    1 MAFCTKLGGHWKQGVN----VPVSSMLGSLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKD 109

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT1G74230.1 (| Symbols: GR-RBP5 | glycine-rich RNA-binding protein 5 | chr1:27915346-27916857 FORWARD LENGTH=289)

HSP 1 Score: 116.316 bits (290), Expect = 5.583e-27
Identity = 61/115 (53.04%), Postives = 83/115 (72.17%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF +KVG L   + S       +SML + RCMSS K+F+GG+S+ T +  L+EAFS +G+V +A++I+DR TG+SRGF FV F S E AS+A+  +DGQ+LHGR IRV+ ATER
Sbjct:    1 MAFLSKVGRLFSQTSSH--VTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATER 112

[Close]

BLAST of ppa013208m vs. TAIR10
Match: AT3G08000.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:2555034-2555829 REVERSE LENGTH=143)

HSP 1 Score: 104.76 bits (260), Expect = 1.681e-23
Identity = 54/109 (49.54%), Postives = 76/109 (69.72%), Query Frame = 1

Query:   16 KVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            +V ++ +HSIS +         +++   SSKLFIGGLS+   ++SLK+AFSSFG+V E R+  D+ +G+SRGFGFVDFA +  A SA +AMDG+ L GR +R+S A ER
Sbjct:   12 RVSAIPQHSISSSFHFLPQFCTSSSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRISFALER 120

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0017s08570.1 ()

HSP 1 Score: 164.851 bits (416), Expect = 1.577e-41
Identity = 84/115 (73.04%), Postives = 98/115 (85.22%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF NK GSL+R S+SQNGQ PMASMLN+ RCMSS KLFIGGL++ T D+SLK+AFS FG+VTEARVI DR+TG+SRGFGFV + S ESAS AL+AMDGQEL GRNIRV  AT++
Sbjct:    1 MAFFNKFGSLVRQSVSQNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDK 115

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0323s00200.1 ()

HSP 1 Score: 155.606 bits (392), Expect = 9.570e-39
Identity = 81/115 (70.43%), Postives = 93/115 (80.87%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF NK+GSL R SISQ GQ PM SMLN+ RCMSS KLFIGGL + T D++LK+AFS FG+VTEARVIMDR TG+SRGFGFV + S E+AS AL+AMDGQ L GR +RVS A ER
Sbjct:    1 MAFFNKLGSLARQSISQKGQVPMVSMLNSIRCMSSSKLFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEER 115

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0323s00210.1 ()

HSP 1 Score: 155.221 bits (391), Expect = 1.250e-38
Identity = 81/116 (69.83%), Postives = 91/116 (78.45%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAF NK+GSL R SISQ GQ PM SMLN  RCMSS KLFIGGL +   D +LKEAFS +G+V EARVIMDR TG+SRGFGFV + S ESAS A +AMDGQEL GRN+RVS A ER+
Sbjct:    1 MAFFNKLGSLARQSISQKGQVPMVSMLNTIRCMSSSKLFIGGLPWSADDHTLKEAFSGYGEVIEARVIMDRETGRSRGFGFVSYDSSESASEAQSAMDGQELGGRNVRVSFAEERS 116

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0001s32720.1 ()

HSP 1 Score: 152.14 bits (383), Expect = 1.058e-37
Identity = 80/115 (69.57%), Postives = 90/115 (78.26%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF NK+GSL R SISQ GQ PM SMLN  RCMSS KLFIGGL + T D +LKEAFS +G+V EARVIMDR TG+SRGFGFV + S E+AS AL+AMDGQ L GR +RVS A ER
Sbjct:    1 MAFFNKLGSLARQSISQKGQVPMVSMLNTIRCMSSSKLFIGGLPWSTDDHTLKEAFSGYGEVIEARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEER 115

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0012s05870.1 ()

HSP 1 Score: 133.65 bits (335), Expect = 3.894e-32
Identity = 68/119 (57.14%), Postives = 89/119 (74.79%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMA----SMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF  K+G++LR + S+   + ++    S+  A RCMSS KLF+GG+SF T D SLKEAF  +G+V EAR+IMDR TG+SRGFGFV + S E ASSA+ A+DGQ+LHGR +RV+ ATER
Sbjct:    1 MAFLTKMGNMLRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATER 119

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0015s06810.1 ()

HSP 1 Score: 133.265 bits (334), Expect = 5.086e-32
Identity = 69/119 (57.98%), Postives = 87/119 (73.11%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHS----ISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF  K+G++LR +    I+    A   S+  A RCMSS K+FIGG+SF T D  LKEAF  +G+V EAR+IMDR+TG+SRGFGFV + S E ASSA+ AMDGQ+LHGR +RV+ ATER
Sbjct:    1 MAFLTKLGNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATER 119

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0015s06810.2 ()

HSP 1 Score: 128.642 bits (322), Expect = 1.253e-30
Identity = 67/119 (56.30%), Postives = 85/119 (71.43%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHS----ISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF  K+G++LR +    I+    A   S+  A RCMSS K+FIGG+SF T D  LKEAF  +G+V E  +IMDR+TG+SRGFGFV + S E ASSA+ AMDGQ+LHGR +RV+ ATER
Sbjct:    1 MAFLTKLGNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEGIIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATER 119

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0323s00210.2 ()

HSP 1 Score: 125.176 bits (313), Expect = 1.385e-29
Identity = 65/94 (69.15%), Postives = 74/94 (78.72%), Query Frame = 1

Query:   67 MASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            M SMLN  RCMSS KLFIGGL +   D +LKEAFS +G+V EARVIMDR TG+SRGFGFV + S ESAS A +AMDGQEL GRN+RVS A ER+
Sbjct:    1 MVSMLNTIRCMSSSKLFIGGLPWSADDHTLKEAFSGYGEVIEARVIMDRETGRSRGFGFVSYDSSESASEAQSAMDGQELGGRNVRVSFAEERS 94

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0004s16260.2 ()

HSP 1 Score: 89.7373 bits (221), Expect = 6.449e-19
Identity = 38/79 (48.10%), Postives = 62/79 (78.48%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            + F+GGL++ T+D+SL+EAFS +G++ ++++I DR TG+SRGFGFV F ++++   A++ M+GQ+L GRNI V+ A  R
Sbjct:    8 RCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQSR 86

[Close]

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Match: POPTR_0004s16260.1 ()

HSP 1 Score: 89.7373 bits (221), Expect = 6.449e-19
Identity = 38/79 (48.10%), Postives = 62/79 (78.48%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            + F+GGL++ T+D+SL+EAFS +G++ ++++I DR TG+SRGFGFV F ++++   A++ M+GQ+L GRNI V+ A  R
Sbjct:    8 RCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEAQSR 86

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000216169 (MDP0000216169)

HSP 1 Score: 199.134 bits (505), Expect = 9.880e-52
Identity = 96/115 (83.48%), Postives = 110/115 (95.65%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAFCNK+GSLL+H+ISQ GQAPM +MLN+ RCMSSKLF+GGLSFGT+DESLKEAFSSFGDVTEARVI DR+TG+SRGFGFV+FASD+SASSAL++MDGQ+LHGRNIRVS ATERT
Sbjct:    1 MAFCNKIGSLLKHNISQTGQAPMTAMLNSVRCMSSKLFVGGLSFGTNDESLKEAFSSFGDVTEARVITDRDTGRSRGFGFVNFASDDSASSALSSMDGQDLHGRNIRVSYATERT 115

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000635271 (MDP0000635271)

HSP 1 Score: 131.339 bits (329), Expect = 2.530e-31
Identity = 66/122 (54.10%), Postives = 91/122 (74.59%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMA----SMLNAARCMSS----KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF +K+GS+LR + ++  ++ +     S+  A RCMSS    KLFIGG+S+ T D+SL+EAF  +G+V EAR+IMDR +G+SRGFGF+ F S E ASSA+ A+DGQELHGR +RV+ AT+R
Sbjct:    1 MAFLSKIGSILRQTANKQIRSEVTPLKLSIHQAIRCMSSMASSKLFIGGISYQTDDQSLREAFQKYGEVVEARIIMDRESGRSRGFGFITFTSSEEASSAIQALDGQELHGRRVRVNYATDR 122

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000302917 (MDP0000302917)

HSP 1 Score: 129.413 bits (324), Expect = 9.614e-31
Identity = 66/122 (54.10%), Postives = 92/122 (75.41%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMA----SMLNAARCMSS----KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF + +GS+LR + ++  ++ ++    S+  A RCMSS    KLFIGG+S+ T D+SL+EAF  +G+V +AR+IMDR +G+SRGFGFV F S+E A+SAL A+DGQELHGR +RV+ ATER
Sbjct:    1 MAFLSXIGSILRQTANKQIRSEVSPFKLSIHQAIRCMSSMGSSKLFIGGVSYQTDDQSLREAFQKYGEVVDARIIMDRESGRSRGFGFVTFTSNEEAASALEALDGQELHGRRVRVNYATER 122

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000255642 (MDP0000255642)

HSP 1 Score: 120.168 bits (300), Expect = 5.833e-28
Identity = 59/94 (62.77%), Postives = 75/94 (79.79%), Query Frame = 1

Query:   73 SMLNAARCMSS----KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            S+  A RCMSS    KLFIGG+S+ T D+SL+EAF  +G+V +AR+IMDR +G+SRGFGFV F S+E A+SAL A+DGQELHGR +RV+ ATER
Sbjct:  259 SIHQAIRCMSSMGSSKLFIGGVSYQTDDQSLREAFQKYGEVVDARIIMDRESGRSRGFGFVTFTSNEEAASALEALDGQELHGRRVRVNYATER 352

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000277020 (MDP0000277020)

HSP 1 Score: 98.2117 bits (243), Expect = 2.374e-21
Identity = 44/93 (47.31%), Postives = 73/93 (78.49%), Query Frame = 1

Query:   64 PMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            P +S  +++   +++LF+GGLS+   ++SLK+AFSSFG+VTE +++ DR++G+SRGFGFV+F+ ++ A  A +AMDG+ L GR +RV++A E+
Sbjct:   37 PSSSSSSSSPPPNNRLFVGGLSWSVDEKSLKDAFSSFGEVTEVKIVYDRDSGRSRGFGFVNFSKEDEAQVAKDAMDGKALLGRPLRVTSAVEK 129

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000294761 (MDP0000294761)

HSP 1 Score: 98.2117 bits (243), Expect = 2.374e-21
Identity = 44/93 (47.31%), Postives = 73/93 (78.49%), Query Frame = 1

Query:   64 PMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            P +S  +++   +++LF+GGLS+   ++SLK+AFSSFG+VTE +++ DR++G+SRGFGFV+F+ ++ A  A +AMDG+ L GR +RV++A E+
Sbjct:   37 PSSSSSSSSPPPNNRLFVGGLSWSVDEKSLKDAFSSFGEVTEVKIVYDRDSGRSRGFGFVNFSKEDEAQVAKDAMDGKALLGRPLRVTSAVEK 129

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000226034 (MDP0000226034)

HSP 1 Score: 88.1965 bits (217), Expect = 2.456e-18
Identity = 40/78 (51.28%), Postives = 61/78 (78.21%), Query Frame = 1

Query:  109 LFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            L   GLS+   ++SLK+AFSSFG+VTE +++ DR++G+SRGFGFV+F+ ++ A  A +AMDG+ L GR +RV++A E+
Sbjct:    6 LGFAGLSWSVDEKSLKDAFSSFGEVTEVKIVYDRDSGRSRGFGFVNFSKEDEAQVAKDAMDGKALLGRPLRVTSAVEK 83

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000797759 (MDP0000797759)

HSP 1 Score: 88.1965 bits (217), Expect = 2.456e-18
Identity = 38/79 (48.10%), Postives = 59/79 (74.68%), Query Frame = 1

Query:  106 KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            + F+GGL++ T +E+L+ AFS +G++ E+++I DR TG+SRGFGFV F ++++   A+ AM+GQ L GRNI V+ A  R
Sbjct:    9 RCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGNEQAMRDAIEAMNGQNLDGRNITVNEAQSR 87

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000794183 (MDP0000794183)

HSP 1 Score: 85.1149 bits (209), Expect = 2.079e-17
Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTA 333
            M   N V  +LR S+       +A +L   R   SKLF+ GLS+ T++  LKEAF   G++ E +VI D  +GKSRG+GFV F S+  A++AL  MDGQ L GR IR+  A
Sbjct:    1 MRCANGVVGILRMSV-------LARIL-LTRHSCSKLFVSGLSWDTNEPVLKEAFGKHGEIIEVKVICDHVSGKSRGYGFVKFTSESEATTALKEMDGQVLDGRQIRLQFA 103

[Close]

BLAST of ppa013208m vs. GDR
Match: MDP0000294262 (MDP0000294262)

HSP 1 Score: 84.7297 bits (208), Expect = 2.716e-17
Identity = 38/74 (51.35%), Postives = 58/74 (78.38%), Query Frame = 1

Query:  121 GLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            GLS    ++SLK+AFSSFG+VT  +++ DR++G+SRGFGFV+F+ ++ A  A +AMDG+ L GR +RV++A E+
Sbjct:  532 GLSXSVDEKSLKDAFSSFGEVTXVKIVYDRDSGRSRGFGFVNFSKEDEAQVAKDAMDGKALLGRPLRVTSAVEK 605

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|255563618|ref|XP_002522811.1| (glycine-rich RNA-binding protein, putative [Ricinus communis] >gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis])

HSP 1 Score: 178.718 bits (452), Expect = 2.833e-43
Identity = 88/115 (76.52%), Postives = 105/115 (91.30%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+GSL+R S++QNG+ P++SMLN+ RCMSS KLFIGGLS+GT+D+SLK+AFS FGDV  ARVI DR+TG+SRGFGFVDF+S +SASSAL+AMDGQELHGRNIRVS ATER
Sbjct:    1 MAFCNKIGSLVRQSVAQNGKVPVSSMLNSIRCMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAMDGQELHGRNIRVSYATER 115

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|225433489|ref|XP_002264895.1| (PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis vinifera] >gi|147833478|emb|CAN75185.1| hypothetical protein VITISV_001912 [Vitis vinifera] >gi|298205231|emb|CBI17290.3| unnamed protein product [Vitis vinifera])

HSP 1 Score: 171.014 bits (432), Expect = 5.907e-41
Identity = 89/120 (74.17%), Postives = 103/120 (85.83%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQN----GQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAFCN+ G+LLR SISQN    GQ  M ++LN+ RCMSS KLFIGGLS+GT D+SLK+AFSSFGDV EARVI DR+TG+SRGFGFV+F SD+SASSAL+AMDGQEL+GRNIRVS A ERT
Sbjct:    1 MAFCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDAFSSFGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANERT 120

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|224128992|ref|XP_002328863.1| (predicted protein [Populus trichocarpa] >gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa] >gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 164.851 bits (416), Expect = 4.233e-39
Identity = 84/115 (73.04%), Postives = 98/115 (85.22%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF NK GSL+R S+SQNGQ PMASMLN+ RCMSS KLFIGGL++ T D+SLK+AFS FG+VTEARVI DR+TG+SRGFGFV + S ESAS AL+AMDGQEL GRNIRV  AT++
Sbjct:    1 MAFFNKFGSLVRQSVSQNGQVPMASMLNSIRCMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDK 115

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|388521423|gb|AFK48773.1| (unknown [Lotus japonicus])

HSP 1 Score: 159.073 bits (401), Expect = 2.323e-37
Identity = 81/115 (70.43%), Postives = 99/115 (86.09%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF NKVG++LR + +Q  QAP+ASMLN  RCMSS KLFIGGLS+G  D+SL++AFSSFG V EARVI+DR+TG+SRGFGFV F S+ESASSAL++MDGQ+L+GRNIRVS A +R
Sbjct:    1 MAFLNKVGNVLRQAAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDR 115

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|388518113|gb|AFK47118.1| (unknown [Lotus japonicus])

HSP 1 Score: 158.688 bits (400), Expect = 3.034e-37
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAF NKVG++LR   +Q  QAP+ASMLN  RCMSS KLFIGGLS+G  D+SL++AFSSFG V EARVI+DR+TG+SRGFGFV F S+ESASSAL++MDGQ+L+GRNIRVS A +R
Sbjct:    1 MAFLNKVGNVLRQGAAQRSQAPVASMLNYIRCMSSSKLFIGGLSYGVDDKSLEDAFSSFGTVAEARVIVDRDTGRSRGFGFVSFDSEESASSALSSMDGQDLNGRNIRVSYANDR 115

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|76160980|gb|ABA40453.1| (RNA binding protein-like protein [Solanum tuberosum] >gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum])

HSP 1 Score: 158.688 bits (400), Expect = 3.034e-37
Identity = 77/118 (65.25%), Postives = 97/118 (82.20%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQA----PMASMLNAARCMSSKLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+G LLR SIS    A    P  +MLNA RCMSS+LF+GGLS+GT D+SLKEAF+SFGDV +A+VI+DR++G+SRGFGFV+F+ ++ A  A+NAMDGQ+LHGRNIRV+ A ER
Sbjct:    1 MAFCNKLGGLLRQSISTGNAASANSPTPAMLNAIRCMSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQLHGRNIRVNLAQER 118

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|1778374|gb|AAB71417.1| (glycine-rich RNA-binding protein PsGRBP [Pisum sativum] >gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum])

HSP 1 Score: 157.918 bits (398), Expect = 5.175e-37
Identity = 79/115 (68.70%), Postives = 99/115 (86.09%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNK+G+LLR   +Q+  AP++SMLN  R MSS KLFIGGLS+G  D+SLK+AF+S+G+V EARVI DR+TG+SRGFGFV+F SDESA+SAL+AMDGQ+L+GRNIRVS A +R
Sbjct:    1 MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDR 115

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|351725255|ref|NP_001236574.1| (uncharacterized protein LOC100527220 [Glycine max] >gi|255631812|gb|ACU16273.1| unknown [Glycine max])

HSP 1 Score: 156.762 bits (395), Expect = 1.153e-36
Identity = 77/115 (66.96%), Postives = 100/115 (86.96%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNKVG++LR   +++ QAP++SMLN  RCMSS KLFIGGLS+G  D+SLK+AFS FGDV +A+VI DR++G+SRGFGFV+F++DESASSAL+AMDG++L GR+IRVS A +R
Sbjct:    1 MAFCNKVGNVLRQGAARSTQAPVSSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDR 115

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|351723185|ref|NP_001236758.1| (uncharacterized protein LOC100499841 [Glycine max] >gi|255627057|gb|ACU13873.1| unknown [Glycine max])

HSP 1 Score: 155.606 bits (392), Expect = 2.568e-36
Identity = 76/115 (66.09%), Postives = 100/115 (86.96%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATER 342
            MAFCNKVG++LR   +++  AP+ASMLN  RCMSS KLFIGGLS+G  D+SLK+AFS FGDV +A+VI DR++G+SRGFGFV+F++DESASSAL+AMDG++L+GR+IRVS A ++
Sbjct:    1 MAFCNKVGNVLRQGAARSTHAPVASMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYANDK 115

[Close]

BLAST of ppa013208m vs. NCBI nr
Match: gi|246771225|gb|ACS94937.1| (putative glycine-rich RNA-binding protein [Tamarix hispida])

HSP 1 Score: 155.606 bits (392), Expect = 2.568e-36
Identity = 77/116 (66.38%), Postives = 101/116 (87.07%), Query Frame = 1

Query:    1 MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSS-KLFIGGLSFGTSDESLKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQELHGRNIRVSTATERT 345
            MAFCN++GSL+R ++SQN  AP+ SMLN+ RCMSS +LF+GGLS+GT D+SLK+AFSSFG+VT+A+VI DR TG+SRGFGFV+F  +E+A SAL++MDG EL+GR+IRVS A ER+
Sbjct:    1 MAFCNRIGSLIRQTVSQNS-APIDSMLNSIRCMSSSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVELNGRSIRVSFAQERS 115

The following BLAST results are available for this feature:

BLAST of ppa013208m vs. Vitis vinifera
BLAST of ppa013208m vs. ExPASy TrEMBL
BLAST of ppa013208m vs. ExPASy Swiss-Prot
BLAST of ppa013208m vs. TAIR10
BLAST of ppa013208m vs. Populus trichicarpa v2.0
BLAST of ppa013208m vs. GDR
BLAST of ppa013208m vs. NCBI nr

BLAST of ppa013208m vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Vitis vinifera)
Total hits: 25


Match Name	E-value	Identity	Description
GSVIVT01021024001	1.381e-43	74.17	assembled CDS	[more]
GSVIVT01007865001	1.871e-32	59.66	assembled CDS	[more]
GSVIVT01033897001	1.643e-20	45.61	assembled CDS	[more]
GSVIVT01030490001	3.659e-20	54.32	assembled CDS	[more]
GSVIVT01031973001	6.242e-20	51.90	assembled CDS	[more]
GSVIVT01038128001	5.842e-18	55.13	assembled CDS	[more]
GSVIVT01001672001	3.787e-17	51.32	assembled CDS	[more]
GSVIVT01032361001	1.218e-15	45.68	assembled CDS	[more]
GSVIVT01007596001	1.591e-15	46.84	assembled CDS	[more]
GSVIVT01036082001	2.714e-15	40.45	assembled CDS	[more]

Pages

BLAST of ppa013208m vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
B9S9Z2_RICCO	3.262e-43	76.52	Glycine-rich RNA-binding protein, putative OS=Rici...	[more]
A5C101_VITVI	6.803e-41	74.17	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A9P9S1_POPTR	4.875e-39	73.04	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q3HVL3_SOLTU	3.494e-37	65.25	RNA binding protein-like protein OS=Solanum tubero...	[more]
P93486_PEA	5.959e-37	68.70	Glycine-rich RNA-binding protein OS=Pisum sativum ...	[more]
C6T3N5_SOYBN	1.328e-36	66.96	Putative uncharacterized protein OS=Glycine max PE...	[more]
C6SXA0_SOYBN	2.958e-36	66.09	Uncharacterized protein OS=Glycine max GN=Gma.5519...	[more]
C6KF85_9CARY	2.958e-36	66.38	Putative glycine-rich RNA-binding protein OS=Tamar...	[more]
O23793_NICSY	3.863e-36	65.81	RNA binding protein OS=Nicotiana sylvestris GN=RGP...	[more]
D6PZY8_TOBAC	3.863e-36	65.81	RNA-binding glycine-rich protein OS=Nicotiana taba...	[more]

Pages

BLAST of ppa013208m vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot)
Total hits: 25


Match Name	E-value	Identity	Description
GRP2_ARATH	2.074e-35	60.53	Glycine-rich RNA-binding protein 2, mitochondrial ...	[more]
RT19_ARATH	2.716e-27	53.98	40S ribosomal protein S19, mitochondrial OS=Arabid...	[more]
GRP_HORVU	4.199e-20	55.70	Glycine-rich RNA-binding protein blt801 OS=Hordeum...	[more]
GRP1_DAUCA	4.199e-20	54.43	Glycine-rich RNA-binding protein OS=Daucus carota ...	[more]
GRPA_MAIZE	1.351e-18	50.00	Glycine-rich RNA-binding, abscisic acid-inducible ...	[more]
GRP2_SORBI	3.009e-18	48.84	Glycine-rich RNA-binding protein 2 OS=Sorghum bico...	[more]
RBM3_MOUSE	2.548e-17	52.63	Putative RNA-binding protein 3 OS=Mus musculus GN=...	[more]
ROC2_NICSY	4.346e-17	46.91	29 kDa ribonucleoprotein B, chloroplastic OS=Nicot...	[more]
RBM3_HUMAN	4.346e-17	52.63	Putative RNA-binding protein 3 OS=Homo sapiens GN=...	[more]
RBM3_RAT	7.412e-17	51.32	Putative RNA-binding protein 3 OS=Rattus norvegicu...	[more]

Pages

BLAST of ppa013208m vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs TAIR 10)
Total hits: 25


Match Name	E-value	Identity	Description
AT3G23830.2	2.671e-37	61.74	\| Symbols: GR-RBP4, GRP4 \| glycine-rich RNA-bindin...	[more]
AT3G23830.1	2.671e-37	61.74	\| Symbols: GR-RBP4, GRP4 \| glycine-rich RNA-bindin...	[more]
AT4G13850.4	2.261e-36	60.53	\| Symbols: ATGRP2 \| glycine-rich RNA-binding prote...	[more]
AT4G13850.3	2.261e-36	60.53	\| Symbols: ATGRP2 \| glycine-rich RNA-binding prote...	[more]
AT4G13850.2	2.261e-36	60.53	\| Symbols: ATGRP2 \| glycine-rich RNA-binding prote...	[more]
AT4G13850.1	2.261e-36	60.53	\| Symbols: ATGRP2, GR-RBP2, GRP2 \| glycine-rich RN...	[more]
AT5G61030.1	1.329e-28	50.00	\| Symbols: GR-RBP3 \| glycine-rich RNA-binding prot...	[more]
AT5G47320.1	2.960e-28	53.98	\| Symbols: RPS19 \| ribosomal protein S19 \| chr5:19...	[more]
AT1G74230.1	5.583e-27	53.04	\| Symbols: GR-RBP5 \| glycine-rich RNA-binding prot...	[more]
AT3G08000.1	1.681e-23	49.54	\| Symbols: \| RNA-binding (RRM/RBD/RNP motifs) fam...	[more]

Pages

BLAST of ppa013208m vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0)
Total hits: 25


Match Name	E-value	Identity
POPTR_0017s08570.1	1.577e-41	73.04	[more]
POPTR_0323s00200.1	9.570e-39	70.43	[more]
POPTR_0323s00210.1	1.250e-38	69.83	[more]
POPTR_0001s32720.1	1.058e-37	69.57	[more]
POPTR_0012s05870.1	3.894e-32	57.14	[more]
POPTR_0015s06810.1	5.086e-32	57.98	[more]
POPTR_0015s06810.2	1.253e-30	56.30	[more]
POPTR_0323s00210.2	1.385e-29	69.15	[more]
POPTR_0004s16260.2	6.449e-19	48.10	[more]
POPTR_0004s16260.1	6.449e-19	48.10	[more]

Pages

BLAST of ppa013208m vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0)
Total hits: 25


Match Name	E-value	Identity	Description
MDP0000216169	9.880e-52	83.48	MDP0000216169	[more]
MDP0000635271	2.530e-31	54.10	MDP0000635271	[more]
MDP0000302917	9.614e-31	54.10	MDP0000302917	[more]
MDP0000255642	5.833e-28	62.77	MDP0000255642	[more]
MDP0000277020	2.374e-21	47.31	MDP0000277020	[more]
MDP0000294761	2.374e-21	47.31	MDP0000294761	[more]
MDP0000226034	2.456e-18	51.28	MDP0000226034	[more]
MDP0000797759	2.456e-18	48.10	MDP0000797759	[more]
MDP0000794183	2.079e-17	45.05	MDP0000794183	[more]
MDP0000294262	2.716e-17	51.35	MDP0000294262	[more]

Pages

BLAST of ppa013208m vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs NCBI nr )
Total hits: 25


Match Name	E-value	Identity	Description
gi\|255563618\|ref\|XP_002522811.1\|	2.833e-43	76.52	glycine-rich RNA-binding protein, putative [Ricinu...	[more]
gi\|225433489\|ref\|XP_002264895.1\|	5.907e-41	74.17	PREDICTED: glycine-rich RNA-binding protein 2, mit...	[more]
gi\|224128992\|ref\|XP_002328863.1\|	4.233e-39	73.04	predicted protein [Populus trichocarpa] >gi\|118482...	[more]
gi\|388521423\|gb\|AFK48773.1\|	2.323e-37	70.43	unknown [Lotus japonicus]	[more]
gi\|388518113\|gb\|AFK47118.1\|	3.034e-37	70.43	unknown [Lotus japonicus]	[more]
gi\|76160980\|gb\|ABA40453.1\|	3.034e-37	65.25	RNA binding protein-like protein [Solanum tuberosu...	[more]
gi\|1778374\|gb\|AAB71417.1\|	5.175e-37	68.70	glycine-rich RNA-binding protein PsGRBP [Pisum sat...	[more]
gi\|351725255\|ref\|NP_001236574.1\|	1.153e-36	66.96	uncharacterized protein LOC100527220 [Glycine max]...	[more]
gi\|351723185\|ref\|NP_001236758.1\|	2.568e-36	66.09	uncharacterized protein LOC100499841 [Glycine max]...	[more]
gi\|246771225\|gb\|ACS94937.1\|	2.568e-36	66.38	putative glycine-rich RNA-binding protein [Tamarix...	[more]

Pages

InterPro

Analysis Name: InterProScan of Prunus persica Whole Genome v1.0
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 37..107 score: 1.4
IPR000504	RNA recognition motif domain	SMART	SM00360	RNA recognition motif	coord: 36..109 score: 1.5
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 35..113 score: 22
IPR012677	Nucleotide-binding, alpha-beta plait	GENE3D	3.30.70.330	no description	coord: 34..128 score: 1.6
None	No IPR available	PANTHER	PTHR24012	FAMILY NOT NAMED	coord: 25..135 score: 2.4
None	No IPR available	PANTHER	PTHR24012:SF31	SUBFAMILY NOT NAMED	coord: 25..135 score: 2.4
None	No IPR available	SEG	seg	seg	coord: 116..135 score
None	No IPR available	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 34..134 score: 4.7
None	No IPR available	SEG	seg	seg	coord: 4..22 score: NAcoord: 61..73 score
None	No IPR available	SEG	seg	seg	coord: 1..7 score: NAcoord: 32..47 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_1:12800877..12803755+
coding sequence from alignment at scaffold_1:12800877..12803755+

mRNA sequence

>ppa013208m ID=ppa013208m; Name=ppa013208m; organism=Prunus persica; type=mRNA; length=787bp
TGATTTTCGGCTTAAACCCTAGCCGCTCCGCTTCTTCTTCATCCTCATTT
CTCTCTGAGGTTCTTGGAACACCTGAGAACAGTGAACATTGGAAATGGCT
TTCTGTAACAAAGTCGGGAGCCTCTTGAGGCATAGCATTTCCCAGAATGG
ACAAGCACCCATGGCATCTATGCTTAATGCTGCCCGCTGCATGTCCTCCA
AGCTTTTTATTGGAGGTCTTTCATTTGGAACTAGTGACGAGTCTCTTAAA
GAAGCATTCTCTAGCTTTGGTGATGTGACTGAGGCAAGGGTTATTATGGA
TAGGAATACTGGGAAGTCTAGGGGGTTTGGATTTGTTGACTTTGCCAGTG
ATGAATCTGCTAGTTCAGCACTTAATGCCATGGATGGCCAGGAGTTGCAT
GGGCGAAACATTCGCGTCAGCACTGCCACTGAGAGAACTGGTCCTCGACC
ATATAATGGTGGTGGTGGTGGCGGCGGTTACCGCGGGGATGGTGGCTATT
AAATGGGTGTTTGGTAGAAAAGAAAGTGGCCTTTAAGCTGTTGCCACAAG
TGCTGTCTATAGACTTTTCTATCGTGATTTCTCTAGAATTGGGTTTGTTT
TTGTCACTTGGATTTATTAGATTAATTTCTGGCATTGTAGATGTGCTGGT
TATATCTAGCTATGCAAGTCAGTTGCAGAAGTTTTACAGTAAAGCTTTTC
ATTTGCATGTTATCTAGCATCATTGCTGAATGATTGTTTGTGAATGATTT
TAGTAATGCTTCTACTGAGTTACTCTGCGTTCCAACT

protein sequence of ppa013208m

>ppa013208m ID=ppa013208m; Name=ppa013208m; organism=Prunus persica; type=polypeptide; length=136bp
MAFCNKVGSLLRHSISQNGQAPMASMLNAARCMSSKLFIGGLSFGTSDES
LKEAFSSFGDVTEARVIMDRNTGKSRGFGFVDFASDESASSALNAMDGQE
LHGRNIRVSTATERTGPRPYNGGGGGGGYRGDGGY*

mRNA from alignment at scaffold_1:12800877..12803755+

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>ppa013208m ID=ppa013208m; Name=ppa013208m; organism=Prunus persica; type=mRNA; length=2879bp; location=Sequence derived from: scaffold_1:12800877..12803755+ (Prunus persica
TGATTTTCGGCTTAAACCCTAGCCGCTCCGCTTCTTCTTCATCCTCATTT
CTCTCTGAGGTAAACCCCTTTCCTAAACCCTACCGCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTGAATGCATGTTATCAGATTGTATCAGTTTCCAT
GTTTTATTTGACCTGTTTTGTTACTGATTTTTCTTATTTGTTGTTCTTCT
GGGAATGTAAATATAGGTGTATTCTGGGTTTTGGATTTTTTTTTATAAGT
AGGAAGATGTATGACTCCGTGTTTTTGGGTATTGTATGTTATTTGTTTAG
CTACCGATCAGCTTGAGGAAAATGGTAGTAACAGAGAGAGAATGTAGGTT
TGAAGAATAAATAGACTAGAGGAAATGGAAAAGAGAGCGTTTTCTATCCG
TTTGCATTTTAGAAAGTAGATCAAAGCAGCCAGGTGTGCGAAGCAGTGGG
GGAACAAGGCTGTTTTAATTTCCTGTCTGACCCAAATAGTTTTTGTTTGG
GGTGTATTAGGAGGTGCAAGACTCTTCATATTCTAGGTGGGAGATTCAGA
GTCTCTGGCATGTACTTATTGAAGAAATATACCCAGTGTCGTCAAATATT
TTTGCCAAATTTCTTTTTGGTTCTGTAAATAAACTTTTGTTTACCGAAGA
GTTTTTTTTTAAAAAAAAAAATTTGGTGCTTTGTAATGGGGAAAGTAATT
TCAATCTTTGATGACTTGTTTCTTGTCAATACACTCGAAGTCTTCCTGCT
ACTGGTTGTGTTGTTTGAATTTAAATAATGAAAATTACTTTTGTGTAATG
ACATTGGTTTATTTTAAATATGTTGGCTGTAGTATAGAGCAAGTTGTTTT
TTATTGGAAGTGGTTTCTAACAATTTTTTGCATATTTGCTTTGGAATATA
TGTGTTCATTTTGAGTAACTCTTGTAGTTTCTAGCAATCTATTCGTGATG
TTTTTGTTGCTGCTGTTGTTTTTGTTGTGATGGTGAGAATTGTTGCTGGT
GCAGGTTCTTGGAACACCTGAGAACAGTGAACATTGGAAATGGCTTTCTG
TAACAAAGTCGGGAGCCTCTTGAGGCATAGCATTTCCCAGAATGGACAAG
CACCCATGGCATCTATGCTTAATGCTGCCCGCTGCATGTCCTCCAAGCTT
TTTATTGGAGGTATATTATTGGACAATCTGTGTCTAAGATGACTAATTAG
AGATCCTGTAGATTTATATTTGACATTTTGTTTCTAAATTGTGGTTTGTT
AGGTCTTTCATTTGGAACTAGTGACGAGTCTCTTAAAGAAGCATTCTCTA
GCTTTGGTGATGTGACTGAGGGTAAGTTTTAAATGTGGTGTTTTGTTATT
GTAGGCTTGCTGAAAAGCTTAACTTCTTGCCATAAAGTATATATACCTGC
AATTTCTTCATCGTACCAAAACTTTGTTTAGGCAGAGCATTACACTTGCA
TATTGCATCATGTGCTATATAATATACTTCACAGTATGGAGTTAGGCGAA
ATGAATATTTGGTAACCAAGACCAAAAATCTTGGTTTTCAATTGTTGCTA
TTATTACTGCTTCTGCTCAGCCTTCAATTACGCATCTGTTAATGATTTCC
ATCTGATGCTTTCTCTGTATCTAGGGAACAGCCTCAAATTCTCGAATGGT
TTTAAACTTTGGGTTTACTTGAAAAGTATTGAGTAATGTATTTATTTTGT
AAGTTTTTGTAGTTCAATAACTCACTTTGTATCTTCCTGCTATTTGGGTT
GTCTCCAGCCTCTTAATCTAGGTTTTTTCTATTGCACCTCTGTAGGAGAA
ATCTATTGGGATCCGTGGGTCCGCTTCTTTTTCTAGTTGTCTTTGTTTTC
TTTTGCATGCAGGATCTTGTGTTTGTTTCCAAAAAAAACTAAAAAGAGTT
GGAGGTTTCTGCTTCTTTTTTTCTTCACAGTGACATTGAGTAATTTGAAC
TGGCATTCGAATGCTGAATAAAATAACTTATTGCATCAAGATGCTGATAT
CGCCTTATATATTTACTTTCTCCTTCCTCCCTTAGTAATGTTATTATCAT
AAGAAATTTCCTTGGGATTTTGTAAGCTTAATGAGGTGATGTCTTTAGGG
TCTGTTGTTGGTCTCTTTCCTATGTACTGGTATTAACAGTTGATTTTTTT
GTGTGCAGCAAGGGTTATTATGGATAGGAATACTGGGAAGTCTAGGGGGT
TTGGATTTGTTGACTTTGCCAGTGATGAATCTGCTAGTTCAGCACTTAAT
GCCATGGATGGCCAGGTCAGAATTTGAATTCTATTTTTGAGAGGTTATGG
AATTGCATAAATTTGAACCATCCAGAATTCAAGGTCCCACATGGTGGAAG
TGTTATTCGAAATGGATGGTCAAATACTTGTTTTAAAGTCTGTAAACACT
GCAGTTGTGAGTGATAGCTCCCCTCTTGAGAGCTGTTAATATTTTCTTAT
AATGATCTTGTGACTGGACATGCTGAATTTCAGGAGTTGCATGGGCGAAA
CATTCGCGTCAGCACTGCCACTGAGAGAACTGGTCCTCGACCATATAATG
GTGGTGGTGGTGGCGGCGGTTACCGCGGGGATGGTGGCTATTAAATGGGT
GTTTGGTAGAAAAGAAAGTGGCCTTTAAGCTGTTGCCACAAGTGCTGTCT
ATAGACTTTTCTATCGTGATTTCTCTAGAATTGGGTTTGTTTTTGTCACT
TGGATTTATTAGATTAATTTCTGGCATTGTAGATGTGCTGGTTATATCTA
GCTATGCAAGTCAGTTGCAGAAGTTTTACAGTAAAGCTTTTCATTTGCAT
GTTATCTAGCATCATTGCTGAATGATTGTTTGTGAATGATTTTAGTAATG
CTTCTACTGAGTTACTCTGCGTTCCAACT

Coding sequence (CDS) from alignment at scaffold_1:12800877..12803755+

>ppa013208m ID=ppa013208m; Name=ppa013208m; organism=Prunus persica; type=CDS; length=408bp; location=Sequence derived from: scaffold_1:12800877..12803755+ (Prunus persica
ATGGCTTTCTGTAACAAAGTCGGGAGCCTCTTGAGGCATAGCATTTCCCA
GAATGGACAAGCACCCATGGCATCTATGCTTAATGCTGCCCGCTGCATGT
CCTCCAAGCTTTTTATTGGAGGTCTTTCATTTGGAACTAGTGACGAGTCT
CTTAAAGAAGCATTCTCTAGCTTTGGTGATGTGACTGAGGCAAGGGTTAT
TATGGATAGGAATACTGGGAAGTCTAGGGGGTTTGGATTTGTTGACTTTG
CCAGTGATGAATCTGCTAGTTCAGCACTTAATGCCATGGATGGCCAGGAG
TTGCATGGGCGAAACATTCGCGTCAGCACTGCCACTGAGAGAACTGGTCC
TCGACCATATAATGGTGGTGGTGGTGGCGGCGGTTACCGCGGGGATGGTG
GCTATTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding