Trait Overview
Traitchlorogenic acid content
Trait Categorybiochemical trait
AbbreviationCLGA
Definitionamount of polyphenolic compound chlorogenic acid in fruit
QTLs[view all 49]
QTLs
Download Table
QTL/MTLLinkage GroupPeakStartStopDatasetMapViewer
qCLGA.RGxBr.2008-ch13(BB)LG13---Apple fruit polyphenolic composition traits-Chagne-2012View
qCLGA.RGxBr.2008-ch17(BB)LG17---Apple fruit polyphenolic composition traits-Chagne-2012View
qCLGA.RGxBr.2008-ch17(RG)LG17---Apple fruit polyphenolic composition traits-Chagne-2012View
qCLGA.RGxBr.2008-ch17(RG).1LG17---Apple fruit polyphenolic composition traits-Chagne-2012View
qCLGA.RGxBr.2010-ch17(RG)LG17---Apple fruit polyphenolic composition traits-Chagne-2012View
qCLGA.RGxBr.2010-ch17(RG).1LG17---Apple fruit polyphenolic composition traits-Chagne-2012View
GWAS0001230----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001244----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001257----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001278----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001282----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001283----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001287----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001295----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001318----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001378----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001391----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001410----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0004091----Apple_polyphenols_GWAS_McClure_2019View
GWAS0004092----Apple_polyphenols_GWAS_McClure_2019View
GWAS0005534----Apple_polyphenols_GWAS_Li_2025View
GWAS0005535----Apple_polyphenols_GWAS_Li_2025View
GWAS0005536----Apple_polyphenols_GWAS_Li_2025View
GWAS0005537----Apple_polyphenols_GWAS_Li_2025View
GWAS0005538----Apple_polyphenols_GWAS_Li_2025View
GWAS0005539----Apple_polyphenols_GWAS_Li_2025View
GWAS0005540----Apple_polyphenols_GWAS_Li_2025View
GWAS0005541----Apple_polyphenols_GWAS_Li_2025View
GWAS0005542----Apple_polyphenols_GWAS_Li_2025View
GWAS0005543----Apple_polyphenols_GWAS_Li_2025View
GWAS0005544----Apple_polyphenols_GWAS_Li_2025View
GWAS0005545----Apple_polyphenols_GWAS_Li_2025View
GWAS0005546----Apple_polyphenols_GWAS_Li_2025View
GWAS0005547----Apple_polyphenols_GWAS_Li_2025View
GWAS0005548----Apple_polyphenols_GWAS_Li_2025View
GWAS0005549----Apple_polyphenols_GWAS_Li_2025View
GWAS0005550----Apple_polyphenols_GWAS_Li_2025View
GWAS0005551----Apple_polyphenols_GWAS_Li_2025View
GWAS0005552----Apple_polyphenols_GWAS_Li_2025View
GWAS0005553----Apple_polyphenols_GWAS_Li_2025View
GWAS0005554----Apple_polyphenols_GWAS_Li_2025View
GWAS0005555----Apple_polyphenols_GWAS_Li_2025View
GWAS0005556----Apple_polyphenols_GWAS_Li_2025View
GWAS0005557----Apple_polyphenols_GWAS_Li_2025View
GWAS0005558----Apple_polyphenols_GWAS_Li_2025View
GWAS0005559----Apple_polyphenols_GWAS_Li_2025View
GWAS0005560----Apple_polyphenols_GWAS_Li_2025View
GWAS0005561----Apple_polyphenols_GWAS_Li_2025View
GWAS0005562----Apple_polyphenols_GWAS_Li_2025View
YearPublication
2024Li Z, Gao C, Fan T, Cui Y, Liu Z, Li L, Qian Q, Cheng M, Zhan X, Niu C, Ma F, Yang P, Guan Q, Integrative Analysis of Genome-wide Association Studies of Polyphenols in Apple Fruits Identifies the MdDof2.4-MdPAT10 Module That Promotes Procyanidin Accumulation, Horticulture Research, 2024 Dec 12; uhae349
2022Kumar S, Molloy C, Hunt M, Deng CH, Wiedow C, Andre C, Dare A, McGhie T. GWAS provides new insights into the genetic mechanisms of phytochemicals production and red skin colour in apple.. Horticulture research. 2022; 9:uhac218.
2020Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8
2019Kendra AM, YuiHui G, Jun S, Melinda V, Leslie CP, Lihua F, Karen B, ZhaoQi Z, Jean-Marc C, Charles FF, Zoë M, Sean M, Genome-wide association studies in apple reveal loci of large effect controlling apple polyphenols, Horticulture Research, Volume 6, 2019, 107
2016Bianco L, Cestaro A, Linsmith G, Muranty H, Denance C, Théron A, Poncet C, Micheletti D, Kerschbamer E, Di Pierro EA, Larger S, Pindo M, van de Weg E, Davassi A, Laurens F, Velasco R, Durel CE, Troggio M. Development and validation of the Axiom(®) Apple480K SNP genotyping array. The Plant journal : for cell and molecular biology. 2016 Feb 26.
2014Bianco L, Cestaro A, Sargent DJ, Banchi E, Derdak S, Di Guardo M, Salvi S, Jansen J, Viola R, Gut I, Laurens F, Chagné D, Velasco R, van de Weg E, Troggio M. Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh). PloS one. 2014; 9(10):e110377.
2012QTL and candidate gene mapping for polyphenolic composition in apple fruit. BMC Plant Biology 2012, 12:12
2012Antanaviciute L, Fernández-Fernández F, Jansen J, Banchi E, Evans KM, Viola R, Velasco R, Dunwell JM, Troggio M, Sargent DJ. Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array. BMC genomics. 2012; 13:203.