Trait Overview
Traitcatechin content
Trait Categorybiochemical trait
AbbreviationCAT
Definitionamount of polyphenolic compound catechin in fruit
QTLs[view all 63]
QTLs
Download Table
QTL/MTLLinkage GroupPeakStartStopDatasetMapViewer
CAT-fl-T1.9A-ch1.1LG1111.1584.48135.38Japanese_plum-flavanol_content-Pacheco-2021View
CAT-sk-T1.9A-ch1.2LG1111.1579.58138.14Japanese_plum-flavanol_content-Pacheco-2021View
qCAT.CA×CF.IIIa.France3A37.6--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.IVb.France4B190--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.IVc.France4C123.9--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.IVd2.France4D79.7--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.Vb.France5B1--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.Vd.France5D58.1--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.Vd.France.15D99.9--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.Vd.France.25D16.1--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.VIb.France6B8.5--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.VIb.France.16B146.2--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.VIIa.France7A106.4--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.VIIc.France7C93.7--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CA×CF.VIId.France7D33.3--Strawberry-Flavonoids-QTL-Labadie-2020View
qCAT.CC.A6.FranceA6240.537.75241.22Strawberry-fruit_colour-QTL-Labadie-2022View
qCAT.RGxBr.2008-ch16(BB)LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qCAT.RGxBr.2008-ch16(RG)LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qCAT.RGxBr.2010-ch16(BB)LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qCAT.RGxBr.2010-ch16(BB).1LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qCAT.RGxBr.2010-ch16(RG)LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qCAT.RGxBr.2010-ch16(RG).1LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qCAT.X5210X8402-LG10.J10----Apple-polyphenol_content-Laurens-2014-
qCAT.X5210X8402-LG12.J09----Apple-polyphenol_content-Laurens-2014-
qCAT.X5210X8402-LG15.J09----Apple-polyphenol_content-Laurens-2014-
qCAT.X5210X8402-LG15.J10----Apple-polyphenol_content-Laurens-2014-
qCAT.X5210X8402-LG17.J10----Apple-polyphenol_content-Laurens-2014-
qCAT.X5210X8402-LG1.J09----Apple-polyphenol_content-Laurens-2014-
qCAT.X5210X8402-LG3.J10----Apple-polyphenol_content-Laurens-2014-
qCAT.X5210X8402-LG4.J10----Apple-polyphenol_content-Laurens-2014-
GWAS0001333----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001400----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0004086----Apple_polyphenols_GWAS_McClure_2019View
GWAS0004952----Apple_polyphenols_GWAS_Li_2025View
GWAS0004953----Apple_polyphenols_GWAS_Li_2025View
GWAS0004954----Apple_polyphenols_GWAS_Li_2025View
GWAS0004955----Apple_polyphenols_GWAS_Li_2025View
GWAS0004956----Apple_polyphenols_GWAS_Li_2025View
GWAS0004957----Apple_polyphenols_GWAS_Li_2025View
GWAS0004958----Apple_polyphenols_GWAS_Li_2025View
GWAS0004959----Apple_polyphenols_GWAS_Li_2025View
GWAS0004960----Apple_polyphenols_GWAS_Li_2025View
GWAS0004961----Apple_polyphenols_GWAS_Li_2025View
GWAS0004962----Apple_polyphenols_GWAS_Li_2025View
GWAS0004963----Apple_polyphenols_GWAS_Li_2025View
GWAS0004964----Apple_polyphenols_GWAS_Li_2025View
GWAS0004965----Apple_polyphenols_GWAS_Li_2025View
GWAS0004966----Apple_polyphenols_GWAS_Li_2025View
GWAS0004967----Apple_polyphenols_GWAS_Li_2025View
GWAS0004968----Apple_polyphenols_GWAS_Li_2025View
GWAS0004969----Apple_polyphenols_GWAS_Li_2025View
GWAS0004970----Apple_polyphenols_GWAS_Li_2025View
GWAS0004971----Apple_polyphenols_GWAS_Li_2025View
GWAS0004972----Apple_polyphenols_GWAS_Li_2025View
GWAS0004973----Apple_polyphenols_GWAS_Li_2025View
GWAS0004974----Apple_polyphenols_GWAS_Li_2025View
GWAS0004975----Apple_polyphenols_GWAS_Li_2025View
GWAS0004976----Apple_polyphenols_GWAS_Li_2025View
GWAS0004977----Apple_polyphenols_GWAS_Li_2025View
GWAS0004978----Apple_polyphenols_GWAS_Li_2025View
GWAS0004979----Apple_polyphenols_GWAS_Li_2025View
GWAS0004980----Apple_polyphenols_GWAS_Li_2025View
GWAS0004981----Apple_polyphenols_GWAS_Li_2025View
YearPublication
2024Li Z, Gao C, Fan T, Cui Y, Liu Z, Li L, Qian Q, Cheng M, Zhan X, Niu C, Ma F, Yang P, Guan Q, Integrative Analysis of Genome-wide Association Studies of Polyphenols in Apple Fruits Identifies the MdDof2.4-MdPAT10 Module That Promotes Procyanidin Accumulation, Horticulture Research, 2024 Dec 12; uhae349
2022Labadie M, Vallin G, Potier A, Petit A, Ring L, Hoffmann T, Gaston A, Munoz-Blanco J, Caballero JL, Schwab W, Rothan C, Denoyes B. High Resolution Quantitative Trait Locus Mapping and Whole Genome Sequencing Enable the Design of an Anthocyanidin Reductase-Specific Homoeo-Allelic Marker for Fruit Colour Improvement in Octoploid Strawberry (Fragaria × ananassa).. Frontiers in plant science. 2022; 13:869655.
2022Kumar S, Molloy C, Hunt M, Deng CH, Wiedow C, Andre C, Dare A, McGhie T. GWAS provides new insights into the genetic mechanisms of phytochemicals production and red skin colour in apple.. Horticulture research. 2022; 9:uhac218.
2021Battistoni B, Salazar J, Vega W, Valderrama-Soto D, Jiménez-Muñoz P, Sepúlveda-González A, Ahumada S, Cho I, Gardana C, Morales H, Peña Á, Silva H, Maldonado J, González M, Infante R and Pacheco I (2022) An Upgraded, Highly Saturated Linkage Map of the Japanese Plum (Prunus salicina Lindl.), and the Identification of a New Major Locus Controlling the Flavan-3-ol Composition in Fruits. Front. Plant Sci. 13:805744. doi: 10.3389/fpls.2022.805744
2020Labadie M, Vallin G, Petit A, Ring L, Hoffmann T, Gaston A, Potier A, Schwab W, Rothan C, Denoyes B. Metabolite Quantitative Trait Loci for Flavonoids Provide New Insights into the Genetic Architecture of Strawberry (Fragaria × ananassa) Fruit Quality. Journal of agricultural and food chemistry. 2020; 68(25):6927-6939.
2019Kendra AM, YuiHui G, Jun S, Melinda V, Leslie CP, Lihua F, Karen B, ZhaoQi Z, Jean-Marc C, Charles FF, Zoë M, Sean M, Genome-wide association studies in apple reveal loci of large effect controlling apple polyphenols, Horticulture Research, Volume 6, 2019, 107
2016Bianco L, Cestaro A, Linsmith G, Muranty H, Denance C, Théron A, Poncet C, Micheletti D, Kerschbamer E, Di Pierro EA, Larger S, Pindo M, van de Weg E, Davassi A, Laurens F, Velasco R, Durel CE, Troggio M. Development and validation of the Axiom(®) Apple480K SNP genotyping array. The Plant journal : for cell and molecular biology. 2016 Feb 26.
2014Bianco L, Cestaro A, Sargent DJ, Banchi E, Derdak S, Di Guardo M, Salvi S, Jansen J, Viola R, Gut I, Laurens F, Chagné D, Velasco R, van de Weg E, Troggio M. Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh). PloS one. 2014; 9(10):e110377.
2014Verdu CF, Guyot S, Childebrand N, Bahut M, Celton J-M, Gaillard S, Lasserre-Zuber P, Troggio M, Guilet D, Laurens F. QTL Analysis and Candidate Gene Mapping for the Polyphenol Content in Cider Apple. PLoS ONE. 2014; 9(10):e107103.
2012QTL and candidate gene mapping for polyphenolic composition in apple fruit. BMC Plant Biology 2012, 12:12