Trait Overview
Traitepicatechin content
Trait Categorybiochemical trait
AbbreviationECAT
Definitionamount of polyphenolic compound epicatechin in fruit
QTLs[view all 37]
QTLs
Download Table
QTL/MTLLinkage GroupPeakStartStopDatasetMapViewer
ECAT-fl-T1.9A-ch1.1LG1111.1585.18138.14Japanese_plum-flavanol_content-Pacheco-2021View
ECAT-sk-T1.9A-ch1.2LG1111.1583.08138.82Japanese_plum-flavanol_content-Pacheco-2021View
qECAT.RGxBr.20008-ch16(BB)LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qECAT.RGxBr.2008-ch16(BB)LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qECAT.RGxBr.2008-ch16(RG)LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qECAT.RGxBr.2008-ch16(RG).1LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qECAT.RGxBr.2010-ch16(BB)LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qECAT.RGxBr.2010-ch16(BB).1LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qECAT.RGxBr.2010-ch16(RG)LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qECAT.RGxBr.2010-ch16(RG).1LG16---Apple fruit polyphenolic composition traits-Chagne-2012View
qECAT.X5210X8402-LG12.F09----Apple-polyphenol_content-Laurens-2014-
qECAT.X5210X8402-LG12.J09----Apple-polyphenol_content-Laurens-2014-
qECAT.X5210X8402-LG14.J09----Apple-polyphenol_content-Laurens-2014-
qECAT.X5210X8402-LG15.J10----Apple-polyphenol_content-Laurens-2014-
qECAT.X5210X8402-LG16.J10----Apple-polyphenol_content-Laurens-2014-
qECAT.X5210X8402-LG1.J09----Apple-polyphenol_content-Laurens-2014-
qECAT.X5210X8402-LG1.J10----Apple-polyphenol_content-Laurens-2014-
qECAT.X5210X8402-LG6.J09----Apple-polyphenol_content-Laurens-2014-
GWAS0001226----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001233----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001240----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001249----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001252----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001274----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001301----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001327----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001334----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001340----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001347----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001355----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001360----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001366----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001372----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001385----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001394----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001401----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001407----Apple_phytochemicals_GWAS_Kumar_2022View
YearPublication
2022Kumar S, Molloy C, Hunt M, Deng CH, Wiedow C, Andre C, Dare A, McGhie T. GWAS provides new insights into the genetic mechanisms of phytochemicals production and red skin colour in apple.. Horticulture research. 2022; 9:uhac218.
2021Battistoni B, Salazar J, Vega W, Valderrama-Soto D, Jiménez-Muñoz P, Sepúlveda-González A, Ahumada S, Cho I, Gardana C, Morales H, Peña Á, Silva H, Maldonado J, González M, Infante R and Pacheco I (2022) An Upgraded, Highly Saturated Linkage Map of the Japanese Plum (Prunus salicina Lindl.), and the Identification of a New Major Locus Controlling the Flavan-3-ol Composition in Fruits. Front. Plant Sci. 13:805744. doi: 10.3389/fpls.2022.805744
2020Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8
2016Bianco L, Cestaro A, Linsmith G, Muranty H, Denance C, Théron A, Poncet C, Micheletti D, Kerschbamer E, Di Pierro EA, Larger S, Pindo M, van de Weg E, Davassi A, Laurens F, Velasco R, Durel CE, Troggio M. Development and validation of the Axiom(®) Apple480K SNP genotyping array. The Plant journal : for cell and molecular biology. 2016 Feb 26.
2014Bianco L, Cestaro A, Sargent DJ, Banchi E, Derdak S, Di Guardo M, Salvi S, Jansen J, Viola R, Gut I, Laurens F, Chagné D, Velasco R, van de Weg E, Troggio M. Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh). PloS one. 2014; 9(10):e110377.
2014Verdu CF, Guyot S, Childebrand N, Bahut M, Celton J-M, Gaillard S, Lasserre-Zuber P, Troggio M, Guilet D, Laurens F. QTL Analysis and Candidate Gene Mapping for the Polyphenol Content in Cider Apple. PLoS ONE. 2014; 9(10):e107103.
2012QTL and candidate gene mapping for polyphenolic composition in apple fruit. BMC Plant Biology 2012, 12:12
2012Antanaviciute L, Fernández-Fernández F, Jansen J, Banchi E, Evans KM, Viola R, Velasco R, Dunwell JM, Troggio M, Sargent DJ. Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array. BMC genomics. 2012; 13:203.
2010Velasco R, Zharkikh A, Affourtit J, Dhingra A, Cestaro A, Kalyanaraman A, Fontana P, Bhatnagar SK, Troggio M, Pruss D, Salvi S, Pindo M, Baldi P, Castelletti S, Cavaiuolo M, Coppola G, Costa F, Cova V, Dal Ri A, Goremykin V, Komjanc M, Longhi S, Magnago P, Malacarne G, Malnoy M, Micheletti D, Moretto M, Perazzolli M, Si-Ammour A, Vezzulli S, Zini E, Eldredge G, Fitzgerald LM, Gutin N, Lanchbury J, Macalma T, Mitchell JT, Reid J, Wardell B, Kodira C, Chen Z, Desany B, Niazi F, Palmer M, Koepke T, Jiwan D, Schaeffer S, Krishnan V, Wu C, Chu VT, King ST, Vick J, Tao Q, Mraz A, Stormo A, Stormo K, Bogden R, Ederle D, Stella A, Vecchietti A, Kater MM, Masiero S, Lasserre P, Lespinasse Y, Allan AC, Bus V, Chagné D, Crowhurst RN, Gleave AP, Lavezzo E, Fawcett JA, Proost S, Rouzé P, Sterck L, Toppo S, Lazzari B, Hellens RP, Durel CE, Gutin A, Bumgarner RE, Gardiner SE, Skolnick M, Egholm M, Van de Peer Y, Salamini F, Viola R. The genome of the domesticated apple (Malus x domestica Borkh.). Nature Genetics. 2010 Oct; 42(10):833-839.