RosBREED_snp_tart_cherry_f_Pp1_05383904, RosBREED_snp_tart_cherry_f_Pp1_05383904 (genetic_marker) Prunus cerasus

Marker Overview
NameRosBREED_snp_tart_cherry_f_Pp1_05383904
dbSNP IDss490545854
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_tart_cherry_f_Pp1_05383904
TypeSNP
SNP AllelesT/C
SpeciesPrunus cerasus
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prunus-TE-6K cherry SNP-estimate1N/A9.09RosBREED_snp_tart_cherry_f_Pp1_05383904View
2sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A23.58RosBREED_snp_tart_cherry_f_Pp1_05383904View
3Sour Cherry-M172x25-F1LG1N/A11.5RosBREED_snp_tart_cherry_f_Pp1_05383904View
4SourCherry-Montx25-F1LG1N/A11.5RosBREED_snp_tart_cherry_f_Pp1_05383904View
5SourCherry-25x25-F1LG1N/A11.5RosBREED_snp_tart_cherry_f_Pp1_05383904View
6Sour Cherry-US-F1LG1N/A11.5RosBREED_snp_tart_cherry_f_Pp1_05383904View
7SourCherry-RE-F1LG1N/A11.5RosBREED_snp_tart_cherry_f_Pp1_05383904View
Sequence
>RosBREED_snp_tart_cherry_f_Pp1_05383904 ID=RosBREED_snp_tart_cherry_f_Pp1_05383904; Name=RosBREED_snp_tart_cherry_f_Pp1_05383904; organism=Prunus cerasus; type=genetic_marker; length=207bp
GTCCCAGAAGAAACGCTCCCTGAGATTCGTTCTTTTGAGTATTTTATTAA
TTCCTTTGTTTATATTCTAAGTTTCGTTAATCTCCAAGGCATTCTTTCAA
A[T/C]TTTGTTCCTTAATCTCTCTCTACATTTTATTTTCTGTTTGGCAG
CCAAGAAAGCGCCGGAAAAATAAAAGAAAATGGGAGAAGAGGAAGCTTTG
ATACTGC
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:5383904..5383904. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:4490595..4490595. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:4070648..4070648. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)