RosBREEDSNP_SNP_CT_1301573_Lg10_RosCOS2296_MAF20_233424_exon1, RosBREEDSNP_SNP_CT_1301573_Lg10_RosCOS2296_MAF20_233424_exon1 (genetic_marker) Malus x domestica

Marker Overview

Name

RosBREEDSNP_SNP_CT_1301573_Lg10_RosCOS2296_MAF20_233424_exon1

dbSNP ID

SNP Array ID

IRSC 9K SNP array for apple:

RosBREEDSNP_SNP_CT_1301573_Lg10_RosCOS2296_MAF20_233424_exon1

Type

SNP

SNP Alleles

T/C

Species

Publication

Libraries


Library Name	Type
IRSC 9K SNP array for apple	SNP_chip

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
MDC008416.202	contig	MDC008416.202:11813..11813 .	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
Chr10	chromosome	Chr10:1600964..1600964 .	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation	n/a

Analyses

This genetic_marker is derived from or has results from the following analyses


Analysis Name	Date Performed
RosBREED SNP development	2011-01-01

Publications


Year	Publication
2013	Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-M432-2013	5	N/A	69	RosBREEDSNP_SNP_CT_1301573_Lg10_RosCOS2296_MAF20_233424_exon1	View
2	Apple-M432-2013-physical-Malus-domestica	10	N/A	1301573	RosBREEDSNP_SNP_CT_1301573_Lg10_RosCOS2296_MAF20_233424_exon1	View