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Transcript Overview
Name | CMT3A |
Unique Name | JX575802.1-CMT3A.m1 |
Type | mRNA |
Organism | Malus x domestica (Apple) |
Source | genbank |
Product | CMT-type cytosine DNA-methyltransferase 3a |
Genbank Note | MdCMT3a |
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
JX575802.1-CMT3A.m1-cds1 | JX575802.1-CMT3A.m1-cds1 | Malus x domestica | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
CMT3A | JX575802.1-CMT3A.p1 | Malus x domestica | polypeptide |
Cross References
External references for this mRNA
Sequences
The
following sequences are available for this feature:
mRNA sequence >JX575802.1-CMT3A.m1 ID=JX575802.1-CMT3A.m1; Name=CMT3A; organism=Malus x domestica; type=mRNA; length=1119bp atgcaaacaaaaatagagccaaacagatcgaaaagtcatccccgatacca gacatccccaaagtccttacgctccaaaaccaaacagaatcccaatccaa tcactcgcgcactgaaaaacccctatcgcccatctctctctctctctctc tgttctccgccgaagtcgaagaacccaaggcaaaccaagaatgtggaaaa atctgcttctccgccgaaatcgaagaatccgaggcaaaccaatgaggcga gagttgaagaggaggtagcaacgagtgtagaaaaagctgcttctctgccg aggaagccagtgactcaggaggtagctgcggctgatgaagacggagagga atcgaggtttagtggcaaaccgatggaagatgaggagactcgtaagcaat atcccaagagatatgtgggagagaattatgcattgctagcaatcagttgt gagtgttctatgtatttcactgggtcacgaaaagaaaggaagaaatgtta tgaaaggacaattacaaagagtatcgccctttgttttgactttgatcctt gcattggtgcagaaggcaaagaggaatgggcaaaaaaactccaacgagga gagacaaaagaaccctacatttgtaagattgtggaaatgtttgaggcaat tggtgggctattatattttactgcacaatggtactatagatcacaagaca ctgtcataaagcactgtgctagtgttgcttgtgggcatgttgatcaagat gtgaagagtaaatcaattccagtgtgcaattactattgcgacaccaagta tttgctaccgtattctacttttgtcaatctgcaaacaggatattgttctc tttctacttactgtcatgatgctgaaattatgcagtctggaagtgatgac tcaactatctctgtttcggatgatgtttgtttggatagtgaggttgattc aaagctgtcaaatggagtgtgtgccaaatcacaagtaaggctcctggacc tatattctggttgtggagtgatgtctactggcctgtgccttgctgcccat ttggccaatgtcaatcttgtaacgttgagagaaactgtttcaattgattg caatgcaatgctgttgtaa back to topprotein sequence of CMT3A >JX575802.1-CMT3A.p1 ID=JX575802.1-CMT3A.p1; Name=CMT3A; organism=Malus x domestica; type=polypeptide; length=372bp MQTKIEPNRSKSHPRYQTSPKSLRSKTKQNPNPITRALKNPYRPSLSLSL CSPPKSKNPRQTKNVEKSASPPKSKNPRQTNEARVEEEVATSVEKAASLP RKPVTQEVAAADEDGEESRFSGKPMEDEETRKQYPKRYVGENYALLAISC ECSMYFTGSRKERKKCYERTITKSIALCFDFDPCIGAEGKEEWAKKLQRG ETKEPYICKIVEMFEAIGGLLYFTAQWYYRSQDTVIKHCASVACGHVDQD VKSKSIPVCNYYCDTKYLLPYSTFVNLQTGYCSLSTYCHDAEIMQSGSDD STISVSDDVCLDSEVDSKLSNGVCAKSQVRLLDLYSGCGVMSTGLCLAAH LANVNLVTLRETVSIDCNAMLL back to topmRNA from alignment at JX575802:1..1119+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >JX575802.1-CMT3A.m1 ID=JX575802.1-CMT3A.m1; Name=CMT3A; organism=Malus x domestica; type=mRNA; length=1119bp; location=Sequence derived from: JX575802:1..1119+ (Malus x domestica atgcaaacaaaaatagagccaaacagatcgaaaagtcatccccgatacca
gacatccccaaagtccttacgctccaaaaccaaacagaatcccaatccaa
tcactcgcgcactgaaaaacccctatcgcccatctctctctctctctctc
tgttctccgccgaagtcgaagaacccaaggcaaaccaagaatgtggaaaa
atctgcttctccgccgaaatcgaagaatccgaggcaaaccaatgaggcga
gagttgaagaggaggtagcaacgagtgtagaaaaagctgcttctctgccg
aggaagccagtgactcaggaggtagctgcggctgatgaagacggagagga
atcgaggtttagtggcaaaccgatggaagatgaggagactcgtaagcaat
atcccaagagatatgtgggagagaattatgcattgctagcaatcagttgt
gagtgttctatgtatttcactgggtcacgaaaagaaaggaagaaatgtta
tgaaaggacaattacaaagagtatcgccctttgttttgactttgatcctt
gcattggtgcagaaggcaaagaggaatgggcaaaaaaactccaacgagga
gagacaaaagaaccctacatttgtaagattgtggaaatgtttgaggcaat
tggtgggctattatattttactgcacaatggtactatagatcacaagaca
ctgtcataaagcactgtgctagtgttgcttgtgggcatgttgatcaagat
gtgaagagtaaatcaattccagtgtgcaattactattgcgacaccaagta
tttgctaccgtattctacttttgtcaatctgcaaacaggatattgttctc
tttctacttactgtcatgatgctgaaattatgcagtctggaagtgatgac
tcaactatctctgtttcggatgatgtttgtttggatagtgaggttgattc
aaagctgtcaaatggagtgtgtgccaaatcacaagtaaggctcctggacc
tatattctggttgtggagtgatgtctactggcctgtgccttgctgcccat
ttggccaatgtcaatcttgtaacgttgagagaaactgtttcaattgattg
caatgcaatgctgttgtaa back to topCoding sequence (CDS) from alignment at JX575802:1..1119+ >JX575802.1-CMT3A.m1 ID=JX575802.1-CMT3A.m1; Name=CMT3A; organism=Malus x domestica; type=CDS; length=1119bp; location=Sequence derived from: JX575802:1..1119+ (Malus x domestica atgcaaacaaaaatagagccaaacagatcgaaaagtcatccccgatacca gacatccccaaagtccttacgctccaaaaccaaacagaatcccaatccaa tcactcgcgcactgaaaaacccctatcgcccatctctctctctctctctc tgttctccgccgaagtcgaagaacccaaggcaaaccaagaatgtggaaaa atctgcttctccgccgaaatcgaagaatccgaggcaaaccaatgaggcga gagttgaagaggaggtagcaacgagtgtagaaaaagctgcttctctgccg aggaagccagtgactcaggaggtagctgcggctgatgaagacggagagga atcgaggtttagtggcaaaccgatggaagatgaggagactcgtaagcaat atcccaagagatatgtgggagagaattatgcattgctagcaatcagttgt gagtgttctatgtatttcactgggtcacgaaaagaaaggaagaaatgtta tgaaaggacaattacaaagagtatcgccctttgttttgactttgatcctt gcattggtgcagaaggcaaagaggaatgggcaaaaaaactccaacgagga gagacaaaagaaccctacatttgtaagattgtggaaatgtttgaggcaat tggtgggctattatattttactgcacaatggtactatagatcacaagaca ctgtcataaagcactgtgctagtgttgcttgtgggcatgttgatcaagat gtgaagagtaaatcaattccagtgtgcaattactattgcgacaccaagta tttgctaccgtattctacttttgtcaatctgcaaacaggatattgttctc tttctacttactgtcatgatgctgaaattatgcagtctggaagtgatgac tcaactatctctgtttcggatgatgtttgtttggatagtgaggttgattc aaagctgtcaaatggagtgtgtgccaaatcacaagtaaggctcctggacc tatattctggttgtggagtgatgtctactggcctgtgccttgctgcccat ttggccaatgtcaatcttgtaacgttgagagaaactgtttcaattgattg caatgcaatgctgttgtaa back to top
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