Peach-CF-F2-2014

Map Overview

Stock

Name

Type

Details

population

Description:	F2 population developed by crossing two peach genotypes with high and low CR values and selfing the resultant F1 hybrid ‘BY01p6245’.
Origin detail:	ARS-USDA, Southern Fruit and Tree Nut Research Laboratory (Byron, GA, USA)
Population size:	378

Contact

Name

Details

A. Abbott

First name:	Albert
Last name:	Abbott
Institution:	Clemson University
Address:	100 Jordan Hall, Dept. of Genetics and Biochemistry, Clemson University, Clemson, SC, USA 29634
Email:	aalbert@clemson.edu
Phone:	1-864-656-3060

Publication


Year	Publications
2014	Zhebentyayeva TN, Fan S, Chandra A, Bielenberg DG, Reighard GL, Okie WR, Abbott AG.. Dissection of chilling requirement and bloom date QTLs in peach using a whole genome sequencing of sibling trees from an F2 mapping population. Tree Genetics & Genomes. 2014; 10(1):35-51.

Map Loci

This map contains 145 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Peach-CF-F2-2014.1	CPPCT010	CPPCT010D	marker_locus	76.94 cM
Peach-CF-F2-2014.1	M3	M3b	marker_locus	81.32 cM
Peach-CF-F2-2014.1	CPPCT029	CPPCT029	marker_locus	86.6 cM
Peach-CF-F2-2014.1	pchgms105	pchgms105	marker_locus	87.55 cM
Peach-CF-F2-2014.1	pchgms29	Pchgms29	marker_locus	87.77 cM
Peach-CF-F2-2014.1	pchgms11	pchgms11	marker_locus	87.84 cM
Peach-CF-F2-2014.1	pchgms41	pchgms41	marker_locus	87.86 cM
Peach-CF-F2-2014.1	Pchgms40	pchgms40	marker_locus	88.04 cM
Peach-CF-F2-2014.1	pchgms12	pchgms12	marker_locus	88.63 cM
Peach-CF-F2-2014.1	pchgms87	pchgms87	marker_locus	89.83 cM
Peach-CF-F2-2014.1	BPPCT028	BPPCT028	marker_locus	90.03 cM
Peach-CF-F2-2014.1	pchgms17	pchgms17	marker_locus	90.2 cM
Peach-CF-F2-2014.1	M15	M15a	marker_locus	91.19 cM
Peach-CF-F2-2014.1	pchgms18	pchgms18	marker_locus	97.22 cM
Peach-CF-F2-2014.2	UDP-410	UDP-410	marker_locus	0 cM
Peach-CF-F2-2014.2	EAG-131	EAG-131	marker_locus	2.45 cM
Peach-CF-F2-2014.2	PaCITA27	PaCITA27	marker_locus	5.58 cM
Peach-CF-F2-2014.2	EAC-200	EAC-200	marker_locus	7.47 cM
Peach-CF-F2-2014.2	UDA-008	UDA-008	marker_locus	9.88 cM
Peach-CF-F2-2014.2	EGT-106	EGT-106	marker_locus	10.64 cM
Peach-CF-F2-2014.2	eppisf018	eppisf018	marker_locus	13.16 cM
Peach-CF-F2-2014.2	EGA-317	EGA-317	marker_locus	14.13 cM
Peach-CF-F2-2014.2	EAC-304	EAC-304	marker_locus	15.38 cM
Peach-CF-F2-2014.2	MA024	MA024a	marker_locus	18 cM
Peach-CF-F2-2014.2	MA024a	MA024a	marker_locus	18 cM

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Map QTL

This map contains 45 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Peach-CF-F2-2014.2	qBD.CxF-G2.2007.2014	QTL	28 cM	33 cM	30 cM
Peach-CF-F2-2014.4	qBD.CxF-G4a.2007.2014	QTL	3 cM	11 cM	10 cM
Peach-CF-F2-2014.7	qBD.CxF-G7b.2007.2014	QTL	13 cM	22 cM	17 cM
Peach-CF-F2-2014.7	qBD.CxF-G7a.2007.2014	QTL	43 cM	45 cM	44 cM
Peach-CF-F2-2014.1	qBD.CxF-G1d.2008.2014	QTL	0 cM	1 cM	0 cM
Peach-CF-F2-2014.1	qBD.CxF-G1b.2008.2014	QTL	49 cM	61 cM	58 cM
Peach-CF-F2-2014.1	qBD.CxF-G1a.2008.2014	QTL	86 cM	88 cM	87 cM
Peach-CF-F2-2014.2	qBD.CxF-G2.2008.2014	QTL	28 cM	33 cM	29 cM
Peach-CF-F2-2014.3	qBD.CxF-G3.2008.2014	QTL	0 cM	8 cM	3 cM
Peach-CF-F2-2014.4	qBD.CxF-G4a.2008.2014	QTL	5 cM	11 cM	9 cM
Peach-CF-F2-2014.4	qBD.CxF-G4b.2008.2014	QTL	40 cM	56 cM	53 cM
Peach-CF-F2-2014.5	qBD.CxF-G5.2008.2014	QTL	16 cM	22 cM	20 cM
Peach-CF-F2-2014.6	qBD.CxF-G6.2008.2014	QTL	34 cM	42 cM	35 cM
Peach-CF-F2-2014.7	qBD.CxF-G7a.2008.2014	QTL	43 cM	45 cM	44 cM
Peach-CF-F2-2014.1	qBD.CxF-G1d.2009.2014	QTL	0 cM	4 cM	0 cM
Peach-CF-F2-2014.1	qBD.CxF-G1a.2009.2014	QTL	87 cM	89 cM	88 cM
Peach-CF-F2-2014.2	qBD.CxF-G2.2009.2014	QTL	20 cM	29 cM	22 cM
Peach-CF-F2-2014.4	qBD.CxF-G4a.2009.2014	QTL	5 cM	11 cM	10 cM
Peach-CF-F2-2014.5	qBD.CxF-G5.2009.2014	QTL	24 cM	38 cM	34 cM
Peach-CF-F2-2014.7	qBD.CxF-G7a.2009.2014	QTL	43 cM	45 cM	44 cM

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