Peach-CF-F2-2014

Map Overview

Stock

Name

Type

Details

population

Description:	F2 population developed by crossing two peach genotypes with high and low CR values and selfing the resultant F1 hybrid ‘BY01p6245’.
Origin detail:	ARS-USDA, Southern Fruit and Tree Nut Research Laboratory (Byron, GA, USA)
Population size:	378

Contact

Name

Details

A. Abbott

First name:	Albert
Last name:	Abbott
Institution:	Clemson University
Address:	100 Jordan Hall, Dept. of Genetics and Biochemistry, Clemson University, Clemson, SC, USA 29634
Email:	aalbert@clemson.edu
Phone:	1-864-656-3060

Publication


Year	Publications
2014	Zhebentyayeva TN, Fan S, Chandra A, Bielenberg DG, Reighard GL, Okie WR, Abbott AG.. Dissection of chilling requirement and bloom date QTLs in peach using a whole genome sequencing of sibling trees from an F2 mapping population. Tree Genetics & Genomes. 2014; 10(1):35-51.

Map Loci

This map contains 145 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Peach-CF-F2-2014.7	CPPCT033	CPPCT033	marker_locus	52.02 cM
Peach-CF-F2-2014.7	UDAp-409	UDAp-409A	marker_locus	52.13 cM
Peach-CF-F2-2014.7	UDAp-458	UDAp-458B	marker_locus	52.77 cM
Peach-CF-F2-2014.7	pchgms238	pchgms238	marker_locus	60.89 cM
Peach-CF-F2-2014.7	pchgms177	pchgms177	marker_locus	65.89 cM
Peach-CF-F2-2014.8	EGA-176	EGA-176	marker_locus	7.45 cM
Peach-CF-F2-2014.8	CPDCT020	CPDCT020	marker_locus	9.4 cM
Peach-CF-F2-2014.8	CPPCT024	CPPCT024E	marker_locus	12.27 cM
Peach-CF-F2-2014.8	UDP-015	UDP-015	marker_locus	15.62 cM
Peach-CF-F2-2014.8	EGA-467	EGA-467	marker_locus	17.51 cM
Peach-CF-F2-2014.8	EPPCU4962	EPPCU4962D	marker_locus	19.33 cM
Peach-CF-F2-2014.8	EAC-174	EAC-174	marker_locus	20.62 cM
Peach-CF-F2-2014.8	EPPISF020	EPPISF020	marker_locus	28.55 cM
Peach-CF-F2-2014.8	UDP-019	UDP-019	marker_locus	35.45 cM
Peach-CF-F2-2014.8	CPPCT006	CPPCT006	marker_locus	36.85 cM
Peach-CF-F2-2014.8	pchgms234	pchgms234	marker_locus	51.85 cM
Peach-CF-F2-2014.8	PacC13	PacC13	marker_locus	54.09 cM
Peach-CF-F2-2014.8	CPDCT023	CPDCT023	marker_locus	60.56 cM
Peach-CF-F2-2014.8	EGT-183	EGT-183	marker_locus	63.79 cM
Peach-CF-F2-2014.8	PacA33	PacA33	marker_locus	70.04 cM
Peach-CF-F2-2014.8	phgms159	phgms159	marker_locus	71.77 cM

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Map QTL

This map contains 45 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Peach-CF-F2-2014.2	qBD.CxF-G2.2007.2014	QTL	28 cM	33 cM	30 cM
Peach-CF-F2-2014.4	qBD.CxF-G4a.2007.2014	QTL	3 cM	11 cM	10 cM
Peach-CF-F2-2014.7	qBD.CxF-G7b.2007.2014	QTL	13 cM	22 cM	17 cM
Peach-CF-F2-2014.7	qBD.CxF-G7a.2007.2014	QTL	43 cM	45 cM	44 cM
Peach-CF-F2-2014.1	qBD.CxF-G1d.2008.2014	QTL	0 cM	1 cM	0 cM
Peach-CF-F2-2014.1	qBD.CxF-G1b.2008.2014	QTL	49 cM	61 cM	58 cM
Peach-CF-F2-2014.1	qBD.CxF-G1a.2008.2014	QTL	86 cM	88 cM	87 cM
Peach-CF-F2-2014.2	qBD.CxF-G2.2008.2014	QTL	28 cM	33 cM	29 cM
Peach-CF-F2-2014.3	qBD.CxF-G3.2008.2014	QTL	0 cM	8 cM	3 cM
Peach-CF-F2-2014.4	qBD.CxF-G4a.2008.2014	QTL	5 cM	11 cM	9 cM
Peach-CF-F2-2014.4	qBD.CxF-G4b.2008.2014	QTL	40 cM	56 cM	53 cM
Peach-CF-F2-2014.5	qBD.CxF-G5.2008.2014	QTL	16 cM	22 cM	20 cM
Peach-CF-F2-2014.6	qBD.CxF-G6.2008.2014	QTL	34 cM	42 cM	35 cM
Peach-CF-F2-2014.7	qBD.CxF-G7a.2008.2014	QTL	43 cM	45 cM	44 cM
Peach-CF-F2-2014.1	qBD.CxF-G1d.2009.2014	QTL	0 cM	4 cM	0 cM
Peach-CF-F2-2014.1	qBD.CxF-G1a.2009.2014	QTL	87 cM	89 cM	88 cM
Peach-CF-F2-2014.2	qBD.CxF-G2.2009.2014	QTL	20 cM	29 cM	22 cM
Peach-CF-F2-2014.4	qBD.CxF-G4a.2009.2014	QTL	5 cM	11 cM	10 cM
Peach-CF-F2-2014.5	qBD.CxF-G5.2009.2014	QTL	24 cM	38 cM	34 cM
Peach-CF-F2-2014.7	qBD.CxF-G7a.2009.2014	QTL	43 cM	45 cM	44 cM

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