Peach-CF-F2-2014

Map Overview

Stock

Name

Type

Details

population

Description:	F2 population developed by crossing two peach genotypes with high and low CR values and selfing the resultant F1 hybrid ‘BY01p6245’.
Origin detail:	ARS-USDA, Southern Fruit and Tree Nut Research Laboratory (Byron, GA, USA)
Population size:	378

Contact

Name

Details

A. Abbott

First name:	Albert
Last name:	Abbott
Institution:	Clemson University
Address:	100 Jordan Hall, Dept. of Genetics and Biochemistry, Clemson University, Clemson, SC, USA 29634
Email:	aalbert@clemson.edu
Phone:	1-864-656-3060

Publication


Year	Publications
2014	Zhebentyayeva TN, Fan S, Chandra A, Bielenberg DG, Reighard GL, Okie WR, Abbott AG.. Dissection of chilling requirement and bloom date QTLs in peach using a whole genome sequencing of sibling trees from an F2 mapping population. Tree Genetics & Genomes. 2014; 10(1):35-51.

Map Loci

This map contains 145 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Peach-CF-F2-2014.4	Pchgms174	pchgms174	marker_locus	11 cM
Peach-CF-F2-2014.4	PaCITA6	PaCITA6	marker_locus	37.66 cM
Peach-CF-F2-2014.4	pchgms162	pchgms162	marker_locus	38.88 cM
Peach-CF-F2-2014.4	UDP-003	UDP-003	marker_locus	40.15 cM
Peach-CF-F2-2014.4	M12	M12a	marker_locus	51.01 cM
Peach-CF-F2-2014.4	Pchgms167	pchgms167	marker_locus	55.16 cM
Peach-CF-F2-2014.4	AMPA103	AMPA103	marker_locus	61.56 cM
Peach-CF-F2-2014.5	BPPCT038	BPPCT038	marker_locus	0 cM
Peach-CF-F2-2014.5	EAA-360	EAA-360	marker_locus	1.46 cM
Peach-CF-F2-2014.5	UDA-042	UDA-042	marker_locus	11.78 cM
Peach-CF-F2-2014.5	CPSCT011	CPSCT011	marker_locus	14.74 cM
Peach-CF-F2-2014.5	UDA-015	UDA-015	marker_locus	19.66 cM
Peach-CF-F2-2014.5	UDP-401	UDP-401	marker_locus	22.54 cM
Peach-CF-F2-2014.5	pchgms165	pchgms165	marker_locus	24.87 cM
Peach-CF-F2-2014.5	ETG-80	ETG-80	marker_locus	35.13 cM
Peach-CF-F2-2014.5	PaCITA21	PaCITA21	marker_locus	37.83 cM
Peach-CF-F2-2014.5	UDA-043	UDA-043	marker_locus	57.61 cM
Peach-CF-F2-2014.5	CPSCT022	CPSCT022	marker_locus	58.1 cM
Peach-CF-F2-2014.5	BPPCT014	BPPCT014	marker_locus	71.32 cM
Peach-CF-F2-2014.6	PaCITA12	PaCITA12	marker_locus	0 cM
Peach-CF-F2-2014.6	BPPCT008	BPPCT008	marker_locus	2.89 cM
Peach-CF-F2-2014.6	EGT-152	EGT-152	marker_locus	3.6 cM
Peach-CF-F2-2014.6	BPPCT009B	BPPCT009B	marker_locus	5.65 cM
Peach-CF-F2-2014.6	BPPCT009	BPPCT009B	marker_locus	5.65 cM
Peach-CF-F2-2014.6	ECA-335	ECA-335	marker_locus	10.51 cM

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Map QTL

This map contains 45 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
Peach-CF-F2-2014.2	qBD.CxF-G2.2007.2014	QTL	28 cM	33 cM	30 cM
Peach-CF-F2-2014.4	qBD.CxF-G4a.2007.2014	QTL	3 cM	11 cM	10 cM
Peach-CF-F2-2014.7	qBD.CxF-G7b.2007.2014	QTL	13 cM	22 cM	17 cM
Peach-CF-F2-2014.7	qBD.CxF-G7a.2007.2014	QTL	43 cM	45 cM	44 cM
Peach-CF-F2-2014.1	qBD.CxF-G1d.2008.2014	QTL	0 cM	1 cM	0 cM
Peach-CF-F2-2014.1	qBD.CxF-G1b.2008.2014	QTL	49 cM	61 cM	58 cM
Peach-CF-F2-2014.1	qBD.CxF-G1a.2008.2014	QTL	86 cM	88 cM	87 cM
Peach-CF-F2-2014.2	qBD.CxF-G2.2008.2014	QTL	28 cM	33 cM	29 cM
Peach-CF-F2-2014.3	qBD.CxF-G3.2008.2014	QTL	0 cM	8 cM	3 cM
Peach-CF-F2-2014.4	qBD.CxF-G4a.2008.2014	QTL	5 cM	11 cM	9 cM
Peach-CF-F2-2014.4	qBD.CxF-G4b.2008.2014	QTL	40 cM	56 cM	53 cM
Peach-CF-F2-2014.5	qBD.CxF-G5.2008.2014	QTL	16 cM	22 cM	20 cM
Peach-CF-F2-2014.6	qBD.CxF-G6.2008.2014	QTL	34 cM	42 cM	35 cM
Peach-CF-F2-2014.7	qBD.CxF-G7a.2008.2014	QTL	43 cM	45 cM	44 cM
Peach-CF-F2-2014.1	qBD.CxF-G1d.2009.2014	QTL	0 cM	4 cM	0 cM
Peach-CF-F2-2014.1	qBD.CxF-G1a.2009.2014	QTL	87 cM	89 cM	88 cM
Peach-CF-F2-2014.2	qBD.CxF-G2.2009.2014	QTL	20 cM	29 cM	22 cM
Peach-CF-F2-2014.4	qBD.CxF-G4a.2009.2014	QTL	5 cM	11 cM	10 cM
Peach-CF-F2-2014.5	qBD.CxF-G5.2009.2014	QTL	24 cM	38 cM	34 cM
Peach-CF-F2-2014.7	qBD.CxF-G7a.2009.2014	QTL	43 cM	45 cM	44 cM

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