Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.3	MdSNPui01364	MdSNPui01364	marker_locus	15.85 cM
Apple-C16xC17-F1-2012.3	MdSNPui04059	MdSNPui04059	marker_locus	16.95 cM
Apple-C16xC17-F1-2012.3	CTG1065894	CTG1065894	marker_locus	19.58 cM
Apple-C16xC17-F1-2012.3	CN495857	CN495857	marker_locus	20.02 cM
Apple-C16xC17-F1-2012.3	BACSSR58	BACSSR58	marker_locus	22.34 cM
Apple-C16xC17-F1-2012.3	BACSSR63-325	BACSSR63-325	marker_locus	22.81 cM
Apple-C16xC17-F1-2012.3	CTG1071750	CTG1071750	marker_locus	24.97 cM
Apple-C16xC17-F1-2012.3	Hi03d06	Hi03d06	marker_locus	30.4 cM
Apple-C16xC17-F1-2012.3	CTG1073688	CTG1073688	marker_locus	33.57 cM
Apple-C16xC17-F1-2012.3	MdSNPui02679	MdSNPui02679	marker_locus	36.15 cM
Apple-C16xC17-F1-2012.3	GD12	GD12	marker_locus	39.95 cM
Apple-C16xC17-F1-2012.3	BACSSR82	BACSSR82	marker_locus	40.64 cM
Apple-C16xC17-F1-2012.3	MdSNPui10837	MdSNPui10837	marker_locus	41.5 cM
Apple-C16xC17-F1-2012.3	MdSNPui10647	MdSNPui10647	marker_locus	41.5 cM
Apple-C16xC17-F1-2012.3	MdSNPui10648	MdSNPui10648	marker_locus	41.5 cM
Apple-C16xC17-F1-2012.3	MdSNPui07455	MdSNPui07455	marker_locus	42.86 cM
Apple-C16xC17-F1-2012.3	MdSNPui00385	MdSNPui00385	marker_locus	44.58 cM
Apple-C16xC17-F1-2012.3	MdSNPui06565	MdSNPui06565	marker_locus	45.54 cM
Apple-C16xC17-F1-2012.3	CTG1064630	CTG1064630	marker_locus	48.53 cM
Apple-C16xC17-F1-2012.3	CTG1077006	CTG1077006	marker_locus	49.83 cM
Apple-C16xC17-F1-2012.3	Hi15b02	Hi15b02	marker_locus	51.63 cM
Apple-C16xC17-F1-2012.3	CTG1071899	CTG1071899	marker_locus	53.97 cM
Apple-C16xC17-F1-2012.3	CN444051	CN444051	marker_locus	55.03 cM
Apple-C16xC17-F1-2012.3	MdSNPui08437	MdSNPui08437	marker_locus	57.24 cM
Apple-C16xC17-F1-2012.3	CTG1058237	CTG1058237	marker_locus	67.7 cM

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