New QTL, marker, genetic map, and genotype data has been added to GDR. It includes data from 12 publications: 4 from Rosa, 3 from Fragaria, 3 from Malus and 2 from Pyrus.
Rosa
- Li S, Yang G, Yang S, Just J, Yan H, Zhou N, Jian H, Wang Q, Chen M, Qiu X, Zhang H, Dong X, Jiang X, Sun Y, Zhong M, Bendahmane M, Ning G, Ge H, Hu JY, Tang K. The development of a high-density genetic map significantly improves the quality of reference genome assemblies for rose. Scientific reports. 2019 Apr 12; 9(1):5985.
- Yu C, Luo L, Pan H, Guo X, Wan H, Zhang Q. Filling gaps with construction of a genetic linkage map in tetraploid roses. Frontiers in plant science. 2015; 5:796.
- Hibrand-Saint Oyant L, Crespel L, Rajapakse S, Zhang L, Foucher F. Genetic linkage maps of rose constructed with new microsatellite markers and locating QTL controlling flowering traits. Tree genetics & genomes. 2008; 4(1):11-23.
- Zhang L.H., Byrne D.H., Ballard R.E., Rajapakse S.. Microsatellite marker development in rose and its application in tetraploid mapping. Journal of the American Society for Horticultural Science. 2006; 131(3):380-387.
Fragaria
- Cockerton HM, Vickerstaff RJ, Karlström A, Wilson F, Sobczyk M, He JQ, Sargent DJ, Passey AJ, McLeary KJ, Pakozdi K, Harrison N, Lumbreras-Martinez M, Antanaviciute L, Simpson DW, Harrison RJ. Identification of powdery mildew resistance QTL in strawberry (Fragaria × ananassa). Theoretical and Applied Genetics. 2018; 131(9):1995-2007.
- Anciro A, Mangandi J, Verma S, Peres N, Whitaker VM, Lee S. FaRCg1: a quantitative trait locus conferring resistance to Colletotrichum crown rot caused by Colletotrichum gloeosporioides in octoploid strawberry. Theoretical and Applied Genetics. 2018 131(10):2167-2177.
- Sanchez-Sevilla JF, Crus-Rus E, Valpuesta V, Botella MA, Amaya I.. Deciphering gamma-decalactone biosynthesis in strawberry fruit using a combination of genetic mapping, RNA-Seq and eQTL analyses. BMC Genomics. 2014; 15:218.
Malus
- Howard NP, van de Weg E, Tillman J, Tong CBS, Silverstein KAT, Luby JJ. Two QTL characterized for soft scald and soggy breakdown in apple (Malus x domestica) through pedigree-based analysis of a large population of interconnected families. Tree Genetics and Genomes. 2018; 14(2).
- Howard N, van de Weg E, Bedford D, Peace C, Vanderzande S, Clark M, Teh S, Cai L, Luby J. Elucidation of the ‘Honeycrisp’ pedigree through haplotype analysis with a multi-family integrated SNP linkage map and a large apple (Malus× domestica) pedigree-connected SNP data set. Horticulture Research. 2017; (4)17003.
- Li L, Deng CH, Knäbel M, Chagné D, Kumar S, Sun J, Zhang S, Wu J. Integrated high-density consensus genetic map of Pyrus and anchoring of the 'Bartlett' v1.0 (Pyrus communis) genome. DNA Research. 2017; 24(3):289-301.
Pyrus
- Montanari S, Bianco L, Allen BJ, Martínez-García PJ, Bassil NV, Postman J, Knäbel M, Kitson B, Deng CH, Chagné D, Crepeau MW, Langley CH, Evans K, Dhingra A, Troggio M, Neale DB. Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization. BMC genomics. 2019 May 02; 20(1):331.
- Chen H, Song Y, Li L, Khan M, Korban S, Wu J, Zhang S. Construction of a High-Density Simple Sequence Repeat Consensus Genetic Map for Pear (Pyrus spp.). Plant Molecular Biology Reporter. 2015; 33(2):316–325.