Trait Overview
Traitskin color
Trait Categorybiochemical trait; plant morphology trait; quality trait
AbbreviationSKINCOL
Definitioncolor of fruit skin/exterior
Descriptors[view all 15]
QTLs[view all 84]
Descriptors
GroupDescriptor
GRIN_PLUMBLUSHCOLOR
GRIN_PLUMSKINCOLOR
GRIN_STRAWBERRYSKINCOLOR
GRIN_APRICOTBLUSHCOLOR
GRIN_APRICOTSKINCOLOR
GRIN_PEACHBLUSHCOLOR
APPLE_CRSGrndCol_0
TART_CHERRY_CRSskin_color
TART_CHERRY_CRSSkin_spec_a
TART_CHERRY_CRSSkin_spec_b
TART_CHERRY_CRSSkin_spec_L
GRIN_APPLEFRTOVERCOL
GRIN_RUBUSFRUITCOLOR
STRAWBERRY_CRSEXTERNAL_COLOR
SWEET_CHERRY_CRSFlesh_C
QTLs
Download Table
QTL/MTLLinkage GroupPeakStartStopDatasetMapViewer
qFRCL.232x1392-ch5M2V-M.23--Agronomical and fruit quality traits-Amaya-2011View
qFRCL.232x1392-ch5M2.2007V-M.2g2--Agronomical and fruit quality traits-Amaya-2011View
qFRCL.232x1392-ch5M2.2007.1V-M.2---Agronomical and fruit quality traits-Amaya-2011View
qFRCL.232x1392-ch5M2.2008V-M.21--Agronomical and fruit quality traits-Amaya-2011View
qFRCL.232x1392-ch5M2.2008.1V-M.21--Agronomical and fruit quality traits-Amaya-2011View
qFRCL.232x1392-ch5M2.2008.2V-M.23--Agronomical and fruit quality traits-Amaya-2011View
qFRCL.BD-LG13.2009LG1338.3--Pear-fruit_phenotype-Wu-2014View
qFRCL.BD-LG16.2008LG1628.8--Pear-fruit_phenotype-Wu-2014View
qFRCL.BD-LG16.2009LG1626.5--Pear-fruit_phenotype-Wu-2014View
qFRCL.BD-LG4.2009LG44.8--Pear-fruit_phenotype-Wu-2014View
qFRCL.DG-G2G2---Peach fruit quality traits-Ogundiwin-2009View
qFRCL.DG-G5G5---Peach fruit quality traits-Ogundiwin-2009View
qFRCL.DG-G7G7---Peach fruit quality traits-Ogundiwin-2009View
qFRCL.F-LG9.2016----Apple-red_skin_coloration-Chagne-2016-
qFRCL.NQ-1.111-4.43Raspberry-Chilling Requirement and Flower and Fruit traits -Molina-Bravo-2013View
qFRCL.NQ-5.1551.6244.6279.22Raspberry-Chilling Requirement and Flower and Fruit traits -Molina-Bravo-2013View
qFRCL.NZST51-LG9.2016.1----Apple-red_skin_coloration-Chagne-2016-
qFRCL.NZST51-LG9.2016.2----Apple-red_skin_coloration-Chagne-2016-
qFRCL.NZST51-LG9.2016.3----Apple-red_skin_coloration-Chagne-2016-
qFRCL.PA153-LG9.2016----Apple-red_skin_coloration-Chagne-2016-
qFRCL.RG-LG9.2016----Apple-red_skin_coloration-Chagne-2016-
qFRCL.S-LG9.2016----Apple-red_skin_coloration-Chagne-2016-
qFSC.AJ-G3-8G3---Peach morphological traits-Yamamoto-2001View
qFSC(a).VC6+9-3.23-46.167.5SweetCherry-Polyphenols-Wunsch-2020View
qFSC(b).VC6+9-3.13-14.4446.7SweetCherry-Polyphenols-Wunsch-2020View
qFSC(b).VC6+9-3.23-3763.9SweetCherry-Polyphenols-Wunsch-2020View
qFSC.CCF-LGIa-fLGIa-f---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGIa-mLGIa-m---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGIIa-fLGIIa-f---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGIIa-f.1LGIIa-f---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGIIIa-fLGIIIa-f---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGIIIa-m/fLGIIIa-m/f---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGIVd-mLGIVd-m---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGIVd-m.1LGIVd-m---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGVb-mLGVb-m---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGVIa-mLGVIa-m---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGVIa-m/fLGVIa-m/f---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGVIa-m/f.1LGVIa-m/f---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGVIb-fLGVIb-f---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.CCF-LGVIb-f.1LGVIb-f---Fruit quality traits-Denoyes-Rothan-2012View
qFSC.EN-ch3.1G355.4--Sweet Cherry-Fruit Skin and Flesh Color-Iezzoni-2010View
qFSC.EN-ch3.2G354.2--Sweet Cherry-Fruit Skin and Flesh Color-Iezzoni-2010View
qFSC.EN-ch3.3G378.3--Sweet Cherry-Fruit Skin and Flesh Color-Iezzoni-2010View
qFSC.EN-ch6G664.3--Sweet Cherry-Fruit Skin and Flesh Color-Iezzoni-2010View
qFSC.GDSS-ch9989.5--Apple skin color trait-Myles-2014View
qFSC.GM-ch3G342.5--Apricot-Fruit Quality Traits-Testolin-2010View
qFSC.HAxRM-ch3G3---apricot-architectural phenological and fruit quality QTL-Patocchi-2013View
qFSC.HAxRM-ch7G7---apricot-architectural phenological and fruit quality QTL-Patocchi-2013View
qFSC.IF-ch2-199724--Agronomic traits-Verde-2002View
qFSC.IF-ch2-199826--Agronomic traits-Verde-2002View
qFSC.IF-ch6-199762--Agronomic traits-Verde-2002View
qFSC.IF-ch6-199862--Agronomic traits-Verde-2002View
qFSC.IF-ch6-1999612--Agronomic traits-Verde-2002View
qFSC.LB-ch3G3---Apricot-Fruit Quality Traits-Testolin-2010View
qFSC(L).VC6+9-3.13-18.3932.84SweetCherry-Polyphenols-Wunsch-2020View
qFSC(L).VC6+9-3.23-41.953.81SweetCherry-Polyphenols-Wunsch-2020View
qFSC.OA-ch16-AkaneAK1615.5--Apple fruit quality traits-Kunihisa-2014View
qFSC.OA-ch9-AkaneAK969.4000000000000057--Apple fruit quality traits-Kunihisa-2014View
qFSC.PF-G2.1G26.0--Peach agronomic traits-Verde-2000View
qFSC.PF-G2.2----Peach agronomic traits-Dettori-2002-
qFSC.PF-G6.1----Peach agronomic traits-Dettori-2002-
qFSC.PF-G6.2G66.0--Peach agronomic traits-Dettori-2002View
qFSC.SP-G5G5---Peach quality traits-Quilot-2004View
qFSC.VC6+9-3.1-20173-21.3932.2SweetCherry-Polyphenols-Wunsch-2020View
qFSC.VC6+9-3.1-20183-20.3847SweetCherry-Polyphenols-Wunsch-2020View
qFSC.VC6+9-3.1-20193-16.7643.5SweetCherry-Polyphenols-Wunsch-2020View
qFSC.VC6+9-3.2-20173-45.1754.45SweetCherry-Polyphenols-Wunsch-2020View
qFSC.VC6+9-3.2-20183-27.7770.54SweetCherry-Polyphenols-Wunsch-2020View
qFSC.VC6+9-3.2-20193-29.7668.53SweetCherry-Polyphenols-Wunsch-2020View
Fruit skin color-ScG6-44.6-naView
Rf----na-
GWAS0001153----Sweet_cherry_quality_GWAS_Holušová_2023View
GWAS0001154----Sweet_cherry_quality_GWAS_Holušová_2023View
GWAS0001155----Sweet_cherry_quality_GWAS_Holušová_2023View
GWAS0001156----Sweet_cherry_quality_GWAS_Holušová_2023View
GWAS0001157----Sweet_cherry_quality_GWAS_Holušová_2023View
GWAS0001213----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001214----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001215----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001216----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001217----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001218----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001219----Apple_phytochemicals_GWAS_Kumar_2022View
GWAS0001220----Apple_phytochemicals_GWAS_Kumar_2022View
YearPublication
2023Holušová K, Čmejlová J, Suran P, Čmejla R, Sedlák J, Zelený L, Bartoš J. High-resolution genome-wide association study of a large Czech collection of sweet cherry (Prunus avium L.) on fruit maturity and quality traits.. Horticulture research. 2023; 10(1):uhac233.
2022Kumar S, Molloy C, Hunt M, Deng CH, Wiedow C, Andre C, Dare A, McGhie T. GWAS provides new insights into the genetic mechanisms of phytochemicals production and red skin colour in apple.. Horticulture research. 2022; 9:uhac218.
2021Alejandro Calle, Manuel J. Serradilla, Ana Wünsch, QTL mapping of phenolic compounds and fruit colour in sweet cherry using a 6+9K SNP array genetic map. Scientia Horticulturae 2021; 280: 109900
2020Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8
2016Bianco L, Cestaro A, Linsmith G, Muranty H, Denance C, Théron A, Poncet C, Micheletti D, Kerschbamer E, Di Pierro EA, Larger S, Pindo M, van de Weg E, Davassi A, Laurens F, Velasco R, Durel CE, Troggio M. Development and validation of the Axiom(®) Apple480K SNP genotyping array. The Plant journal : for cell and molecular biology. 2016 Feb 26.
2016Chagné D, Kirk C, How N, Whitworth C, Fontic C, Reig G, Sawyer G, Rouse S, Poles L, Gardiner SE, Kumar S, Espley R, Volz RK, Troggio M, Iglesias I. A functional genetic marker for apple red skin coloration across different environments. Tree Genetics & Genomes . 2016; 12:67.
2014Molina-Bravo R, Fernandez GE, Sosinski BR. Quantitative trait locus analysis of tolerance to temperature fluctuations in winter, fruit characteristics, flower color, and prickle-free canes in raspberry. Molecular Breeding 2014 33(2):267-280
2014Gardner KM, Brown PJ, Cooke TF, Cann S, Costa F, Bustamante CD, Velasco R, Troggio M, Myles S. Fast and Cost-Effective Genetic Mapping in Apple Using Next-Generation Sequencing. G3 (Bethesda, Md.). 2014 Jul 16.
2014Wu J, Li LT, Li M, Khan MA, Li XG, Chen H, Yin H, Zhang SL. High-density genetic linkage map construction and identification of fruit-related QTLs in pear using SNP and SSR markers. Journal of experimental botany. 2014 Aug 16.
2014Bianco L, Cestaro A, Sargent DJ, Banchi E, Derdak S, Di Guardo M, Salvi S, Jansen J, Viola R, Gut I, Laurens F, Chagné D, Velasco R, van de Weg E, Troggio M. Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh). PloS one. 2014; 9(10):e110377.
2014Kunihisa M, Moriya S, Abe K, Okada K, Haji T, Hayashi T, Kim H, Nishitani C, Terakami S, Yamamoto T. Identification of QTLs for fruit quality traits in Japanese apples: QTLs for early ripening are tightly related to preharvest fruit drop. Breeding science. 2014 Sep; 64(3):240-51.
2013Mapping Architectural, Phenological, and Fruit Quality QTLs in Apricot
2012Antanaviciute L, Fernández-Fernández F, Jansen J, Banchi E, Evans KM, Viola R, Velasco R, Dunwell JM, Troggio M, Sargent DJ. Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array. BMC genomics. 2012; 13:203.
2012Lerceteau-Köhler E, Moing A, Guérin G, Renaud C, Petit A, Rothan C, Denoyes B. Genetic dissection of fruit quality traits in the octoploid cultivated strawberry highlights the role of homoeo-QTL in their control. Theoretical and Applied Genetics. 2012 Apr; 124(6):1059-1077.
2011Zorrilla-Fontanesi Y, Cabeza A, Domínguez P, Medina JJ, Valpuesta V, Denoyes-Rothan B, Sánchez-Sevilla JF, Amaya I. Quantitative trait loci and underlying candidate genes controlling agronomical and fruit quality traits in octoploid strawberry (Fragaria x ananassa). Theoretical and Applied Genetics. 2011 Sep; 123(5):755-778.
2010Ruiz D, Lambert P, Audergon JM, Gouble B, Bureau S, Reich M, Dondini L, Tartarini S, Adami M, Bassi D, Testolin R. Identification of QTLs for fruit quality traits in apricot. Acta Horticulturae. 2010; 862:587-592.
2010QTL analysis and candidate gene mapping for skin and flesh color in sweet cherry fruit (Prunus avium L.). 2010. Tree Genetics and Genomes. 6(6): 821-832.
2009Ogundiwin EA, Peace CP, Gradziel TM, Parfitt DE, Bliss FA, Crisosto CH. A fruit quality gene map of Prunus. BMC genomics. 2009; 10:587.
2005Yamamoto T, Yamaguchi M, Hayashi T. An Integrated Genetic Linkage Map of Peach by SSR, STS, AFLP and RAPD. Journal of the Japanese Society for Horticultural Science. 2005; 74(3):204-213.
2004Quilot B, Wu BH, Kervella J, Génard M, Foulongne M, Moreau K. QTL analysis of quality traits in an advanced backcross between Prunus persica cultivars and the wild relative species P. davidiana. Theor. Appl. Genet. 2004 Aug; 109(4):884-897.
2002Verde I, Quarta R, Cedrola C, Dettori MT. QTL analysis of agronomic traits in a BC1 peach population. Acta Horticulturae. 2002; 592:291-297.
2001Yamamoto T, Shimada T, Imai T, Yaegaki H, Haji T, Matsuta N, Yamaguchi M, Hayashi T. Characterization of morphological traits based on a genetic linkage map in peach. Breeding Science. 2001; 51(4):271-278.
2000Quarta R, Dettori MT, Sartori A, Verde I. Genetic linkage map and QTL analysis in peach. Acta Horticulturae. 2000; 521:233-242.