PavSWN, PavSWN (genetic_marker) Prunus avium

Marker Overview
NameSWN
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:SWN
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTGACTGTGCTGCTTATTAACTTGTCATAGTCCCGCTTTTCTTAGGACCAA
3' Flanking SequenceTGAAGGGTCTTACTTTTTCTGTGTGAATTTGTTAGGATGGCCTTTCAGGA
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [A/G] 'Lapins' [A/A] 'Garnet' [A/A]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
SWNSWNPrunus aviummarker_locus


Sequence
>SWN ID=SWN|Name=SWN|organism=Prunus avium|type=genetic_marker|length=101bp
TGACTGTGCTGCTTATTAACTTGTCATAGTCCCGCTTTTCTTAGGACCAA
RTGAAGGGTCTTACTTTTTCTGTGTGAATTTGTTAGGATGGCCTTTCAGG
A
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015R8N/A67.77SWNView
2Sweet Cherry-RL-F1-2015R8N/A54.63SWNView
3Sweet Cherry-RosBREED-3.8K-20208N/A68.18SWNView
4Sweet Cherry-V-F1-6+9K_array8N/A70.19SWNView
5Sweet Cherry-VxC-F1-6+9K_array8N/A72.33SWNView
Alignments
Feature NameTypeLocationAnalysis
Pp08 chromosome Pp08:22270144..22270144. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr8 chromosome PAV_r1.0chr8:20445834..20445834. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)