Sciros | GDR

Germplasm Overview


Name	Sciros
Alias	Pacific Rose [view all 2]
GRIN ID	N/A
Type	Cultivar
Species	Malus x domestica
Description	N/A
Origin Country	N/A
Origin Detail	N/A
Pedigree	Gala x Splendour
Maternal Parent	Gala
Paternal Parent	Splendour
Maternal Parent of	WSU101 [view all 36]
Paternal Parent of	WSU79 [view all 6]
Phenotypic Data	[view all 836]
SSR Genotype Data	[view all 14]
SNP Genotype Data	[view all 3855]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Chagné D, Kirk C, How N, Whitworth C, Fontic C, Reig G, Sawyer G, Rouse S, Poles L, Gardiner SE, Kumar S, Espley R, Volz RK, Troggio M, Iglesias I. A functional genetic marker for apple red skin coloration across different environments. Tree Genetics & Genomes . 2016; 12:67.

Alias


Synonym
Pacific Rose
Pacrose

Qtl

Total 7 records


#	Name	Dataset
1	qFRCL.RG-LG9.2016	Apple-red_skin_coloration-Chagne-2016
2	qFRCL.NZST51-LG9.2016.1	Apple-red_skin_coloration-Chagne-2016
3	qFRCL.F-LG9.2016	Apple-red_skin_coloration-Chagne-2016
4	qFRCL.NZST51-LG9.2016.2	Apple-red_skin_coloration-Chagne-2016
5	qFRCL.S-LG9.2016	Apple-red_skin_coloration-Chagne-2016
6	qFRCL.PA153-LG9.2016	Apple-red_skin_coloration-Chagne-2016
7	qFRCL.NZST51-LG9.2016.3	Apple-red_skin_coloration-Chagne-2016

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Ssr Genotype Data

Total 14 records

Download Table

#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	Apple_CRS_genotyping_SSR_2010	CH05c06	genetic_marker	104\|118	CH05c06_104; CH05c06_118
2	Apple_CRS_genotyping_SSR_2010	Hi04e04	genetic_marker	246\|246	Hi04e04_246; Hi04e04_246
3	Apple_CRS_genotyping_SSR_2010	Md-Exp7	genetic_marker	202\|202	Md-Exp7_202; Md-Exp7_202
4	Apple_KE_genotyping_SSR_2010	ACO1	genetic_marker	1\|2	ACO1_1; ACO1_2
5	Apple_KE_genotyping_SSR_2010	ACS1	genetic_marker	2\|2	ACS1_2; ACS1_2
6	Apple_KE_genotyping_SSR_2010	CH02b03	genetic_marker	107\|79	CH02b03_107; CH02b03_79
7	Apple_KE_genotyping_SSR_2010	CH05c06	genetic_marker	104\|118	CH05c06_104; CH05c06_118
8	Apple_KE_genotyping_SSR_2010	Hi01b01	genetic_marker	162\|189	Hi01b01_162; Hi01b01_189
9	Apple_KE_genotyping_SSR_2010	Hi04e04	genetic_marker	246\|246	Hi04e04_246; Hi04e04_246
10	Apple_KE_genotyping_SSR_2010	Hi22d06	genetic_marker	129\|132	Hi22d06_129; Hi22d06_132
11	Apple_KE_genotyping_SSR_2010	Md-Exp2	genetic_marker	295\|450	Md-Exp2_295; Md-Exp2_450
12	Apple_KE_genotyping_SSR_2010	Md-Exp7	genetic_marker	202\|202	Md-Exp7_202; Md-Exp7_202
13	Apple_KE_genotyping_SSR_2010	Md-PG1-ssr	genetic_marker	169\|188	Md-PG1-ssr_169; Md-PG1-ssr_188
14	Apple_KE_genotyping_SSR_2010	Md-PG2	genetic_marker	359\|363	Md-PG2_359; Md-PG2_363

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Publications


Year	Publication
2016	Chagné D, Kirk C, How N, Whitworth C, Fontic C, Reig G, Sawyer G, Rouse S, Poles L, Gardiner SE, Kumar S, Espley R, Volz RK, Troggio M, Iglesias I. A functional genetic marker for apple red skin coloration across different environments. Tree Genetics & Genomes . 2016; 12:67.

Snp Genotype Data

Total 3,855 records

Download Table


#	Dataset	Marker Name	Allele	Genotype
1	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00583	T/C	A\|A
2	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00584	T/C	A\|B
3	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00599	T/C	A\|B
4	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00604	A/G	B\|B
5	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00606	T/C	A\|B
6	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00607	T/C	A\|A
7	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00614	T/C	B\|B
8	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00615	T/C	A\|B
9	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00618	T/C	A\|A
10	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00621	T/G	A\|B
11	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00624	A/G	B\|B
12	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00626	T/C	A\|A
13	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00629	T/C	A\|A
14	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00636	T/C	B\|B
15	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00639	T/G	A\|A
16	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00641	T/C	A\|B
17	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00646	T/G	A\|B
18	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00659	A/G	A\|A
19	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00662	T/C	B\|$$
20	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00663	T/C	A\|A
21	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00664	A/G	B\|B
22	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00669	T/G	A\|A
23	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00679	T/C	A\|A
24	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00681	T/C	A\|A
25	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00682	T/C	A\|B

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Cross References

External references for this accession


Database	Accession
Fruit and Nut Cultivars Database	12228

Maternal Parent Of

Phenotypic Data

Total 836 trait scores

Download Table

#	Dataset	Descriptor	Value
1	Apple_CRS_phenotyping_2011	M2_N_0	119.79111111111
2	Apple_CRS_phenotyping_2011	M2_N_10	99.333333333333
3	Apple_CRS_phenotyping_2011	M2_N_20	97.702222222222
4	Apple_CRS_phenotyping_2011	A1_N_0	49.24
5	Apple_CRS_phenotyping_2011	A1_N_10	47.431111111111
6	Apple_CRS_phenotyping_2011	A1_N_20	44.111111111111
7	Apple_CRS_phenotyping_2011	A2_N_0	95.044444444444
8	Apple_CRS_phenotyping_2011	A2_N_10	80.617777777778
9	Apple_CRS_phenotyping_2011	A2_N_20	81.146666666667
10	Apple_CRS_phenotyping_2011	E2_N_0	117.53777777778
11	Apple_CRS_phenotyping_2011	E2_N_10	96.413333333333
12	Apple_CRS_phenotyping_2011	E2_N_20	90.071111111111
13	Apple_CRS_phenotyping_2011	Cn_0	298.209
14	Apple_CRS_phenotyping_2011	Cn_10	236.755
15	Apple_CRS_phenotyping_2011	Cn_20	192.815
16	Apple_CRS_phenotyping_2011	QF_0	119.888
17	Apple_CRS_phenotyping_2011	QF_10	84.436
18	Apple_CRS_phenotyping_2011	QF_20	70.85
19	Apple_CRS_phenotyping_2011	Grease_0	1
20	Apple_CRS_phenotyping_2011	Grease_10	1
21	Apple_CRS_phenotyping_2011	Grease_20	2
22	Apple_CRS_phenotyping_2011	Shrivel_0	1
23	Apple_CRS_phenotyping_2011	Shrivel_10	1
24	Apple_CRS_phenotyping_2011	Shrivel_20	2
25	Apple_CRS_phenotyping_2011	Scald_0	1

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Paternal Parent Of

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