Shawnee

Germplasm Overview
NameShawnee
AliasN/A
Institutional NameShawnee
Sample NameEY0052653_CLT2_CLT2_snapper_rubus.cel
GRIN IDPI 553321
TypeCultivar
SpeciesRubus hybrid
DescriptionN/A
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentN/A
Paternal ParentN/A
Maternal Parent ofN/A
Paternal Parent ofN/A
Phenotypic Data[view all 6]
SSR Genotype Data[view all 3]
SNP Genotype Data[view all 3233]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceMontanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications.. G3 (Bethesda, Md.). 2023 Aug 11.
Ssr Genotype Data
Total 3 records
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# Dataset Marker Marker Type Genotype Marker_Allele
1Apple_SSR_Genotype_Volk_2020CH01f02genetic_marker180|206CH01f02_180; CH01f02_206
2Apple_SSR_Genotype_Volk_2020GD162genetic_marker218|238GD162_218; GD162_238
3Apple_SSR_Genotype_Volk_2020GD96genetic_marker181|185GD96_181; GD96_185
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Publications
YearPublication
2023Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications. G3 (Bethesda, Md.). 2023 Aug 11. DOI: 10.1093/g3journal/jkad170
Snp Genotype Data
Total 3,233 records
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#DatasetMarker NameAlleleGenotype
1Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097816R3
2Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097835Y2
3Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097868R1
4Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097870K1
5Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097890R2
6Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097960Y3
7Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097962Y3
8Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097988R4
9Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098003Y4
10Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098028R1
11Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098077K2
12Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098080Y3
13Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098085Y4
14Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098113Y1
15Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098115Y4
16Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098133Y4
17Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098134K4
18Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098139Y3
19Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098154Y3
20Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098156Y4
21Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098234Y1
22Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098245Y3
23Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098261K3
24Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098267Y3
25Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566098303Y1
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Cross References
External references for this accession
DatabaseAccession
GRINPI 553321
Phenotypic Data
Phenotypic Data
Total 6 trait scores
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# Dataset Descriptor Value
11995_Thompson_CountCHROMOCOUNT28
21995_Thompson_CountCHROMOCOUNT28
31995_Thompson_CountPLOIDYEQUA2n = 4x = 28
41995_Thompson_CountPLOIDYEQUA2n = 4x = 28
5RUBUS.CORVALLIS.STDTYPEb
6RUBUS.CORVALLIS.STDTYPEb
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