McIntosh

Germplasm Overview
NameMcIntosh
AliasN/A
GRIN IDN/A
TypeBreeding Research Material
SpeciesMalus x domestica
DescriptionN/A
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentN/A
Paternal ParentN/A
Maternal Parent ofSpartan [view all 40]
Paternal Parent ofPCF-3-120 [view all 11]
Phenotypic Data[view all 226]
SSR Genotype DataN/A
SNP Genotype Data[view all 10295]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceHoward NP, Peace C, Silverstein KATS, Poets A, Luby JJ, Vanderzande S, Durel CE, Muranty H, Denancé C, and van de Weg E. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Accepted to Horticulture Research.
Publications
YearPublication
2021Howard, N.P., Peace, C., Silverstein, K.A.T. et al. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Hortic Res 8, 202 (2021). https://doi.org/10.1038/s41438-021-00637-5
Snp Genotype Data
Total 10,295 records
Download Table
#DatasetMarker NameAlleleGenotype
1Apple_SNP_genotype_Howard_2021SNP_FB_0948172A/GA | B
2Apple_SNP_genotype_Howard_2021SNP_FB_0948167T/GB | B
3Apple_SNP_genotype_Howard_2021SNP_FB_0448220T/CB | B
4Apple_SNP_genotype_Howard_2021SNP_FB_0448193T/CA | B
5Apple_SNP_genotype_Howard_2021SNP_FB_0448191A/CB | B
6Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_TC_11532952_Lg1_01815_MAF50_1682832_exon5T/CA | B
7Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_AG_11508677_Lg1_01815_MAF50_1661682_exon1A/GA | B
8Apple_SNP_genotype_Howard_2021GDsnp01815A/GA | A
9Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_GA_11499061_Lg1_01815_MAF30_516837_exon4T/CB | B
10Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_GA_11485470_Lg1_01815_MAF20_864893_exon1T/CB | B
11Apple_SNP_genotype_Howard_2021SNP_FB_0419289T/CA | B
12Apple_SNP_genotype_Howard_2021SNP_FB_0419285A/GA | B
13Apple_SNP_genotype_Howard_2021SNP_FB_0419751A/GB | B
14Apple_SNP_genotype_Howard_2021SNP_FB_0419753T/CA | A
15Apple_SNP_genotype_Howard_2021SNP_FB_0419754T/CA | A
16Apple_SNP_genotype_Howard_2021GDsnp00420T/CB | B
17Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_CT_12194485_Lg1_00420_MAF40_1648508_exon1T/CB | B
18Apple_SNP_genotype_Howard_2021SNP_FB_0420063T/CB | B
19Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_TC_12382050_Lg1_02334_MAF40_MDP0000219571_exon3T/CA | A
20Apple_SNP_genotype_Howard_2021SNP_FB_0937887A/GA | B
21Apple_SNP_genotype_Howard_2021SNP_FB_0937902A/GA | B
22Apple_SNP_genotype_Howard_2021SNP_FB_0937905T/CA | B
23Apple_SNP_genotype_Howard_2021SNP_FB_0937906T/GB | B
24Apple_SNP_genotype_Howard_2021SNP_FB_0420924A/GA | B
25Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_GA_13037789_Lg1_01494_MAF30_840712_exon1A/GA | B
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Maternal Parent Of
Germplasm Name Description Type
Spartanaccession
TelamonHas a columnar tree form.accession
Empireaccession
Early Cortlandaccession
Fantazjaaccession
Jonamacaccession
Macounaccession
Melbaaccession
PRI 1661-1accession
PRI 1661-2accession
Sharonaccession
10C-10-19accession
PRI2-19accession
Spenceraccession
Bancroftaccession
Niagaraaccession
Bates Loboaccession
Charlotteaccession
Scotiaaccession
Colletaccession
Barryaccession
Belle de Mleievaccession
Brusnichnoeaccession
Franklinaccession
Joyceaccession
Merton Charmaccession
Mezenskoyeaccession
Northlandaccession
Olimpiyskoyeaccession
Orlikaccession
Orlovskaja Girljandaaccession
Orlovskaya Zaryaaccession
Orlovskoe Polosatoeaccession
PRI 1661_1accession
PRI 1661_2accession
PRI 388_14accession
Tydemans Early Worcesteraccession
Unnamed 1974_496accession
Utrennyaya Zvezdaaccession
Victoryaccession
Phenotypic Data
Phenotypic Data
Total 226 trait scores
Download Table
# Dataset Descriptor Value
1Apple_CRS_phenotyping_2011pH_103.46
2Apple_CRS_phenotyping_2011pH_203.75
3Apple_CRS_phenotyping_2011C0_cm_00.042672
4Apple_CRS_phenotyping_2011C0_cm_100.250952
5Apple_CRS_phenotyping_2011C0_cm_200.313944
6Apple_CRS_phenotyping_2012HarvDate08/28/2012
7Apple_CRS_phenotyping_2012HarvestYear2012
8Apple_CRS_phenotyping_2012WeekD
9Apple_CRS_phenotyping_2012Location1
10Apple_CRS_phenotyping_2012GrndCol_01
11Apple_CRS_phenotyping_2012SkinCol_04
12Apple_CRS_phenotyping_2012OvrColType_04
13Apple_CRS_phenotyping_2012PercOvrCol_03
14Apple_CRS_phenotyping_2012Russet_Loc_01
15Apple_CRS_phenotyping_2012RussLoc1_01
16Apple_CRS_phenotyping_2012RussLoc2_00
17Apple_CRS_phenotyping_2012RussLoc3_00
18Apple_CRS_phenotyping_2012RussLoc4_00
19Apple_CRS_phenotyping_2012RussAmt_02
20Apple_CRS_phenotyping_2012Crack_01
21Apple_CRS_phenotyping_2012Shape_08
22Apple_CRS_phenotyping_2012CalyxO_01
23Apple_CRS_phenotyping_2012SunBurn_01
24Apple_CRS_phenotyping_2012CoreO_00
25Apple_CRS_phenotyping_2012StarchRxn_05.4
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Paternal Parent Of
Germplasm Name Description Type
PCF-3-120accession
Regentaccession
Miltonaccession
Early McIntoshaccession
Antonovka OB NTTT2accession
Carnetaccession
Cortlandaccession
Kyokkoaccession
Morozovskoyeaccession
Orlovskoye Zimneeaccession
Slava Pobeditelyamaccession