McIntosh

Germplasm Overview
NameMcIntosh
AliasN/A
GRIN IDN/A
TypeBreeding Research Material
SpeciesMalus x domestica
DescriptionN/A
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentN/A
Paternal ParentN/A
Maternal Parent ofSpartan [view all 40]
Paternal Parent ofPCF-3-120 [view all 11]
Phenotypic Data[view all 226]
SSR Genotype DataN/A
SNP Genotype Data[view all 10295]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceHoward NP, Peace C, Silverstein KATS, Poets A, Luby JJ, Vanderzande S, Durel CE, Muranty H, Denancé C, and van de Weg E. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Accepted to Horticulture Research.
Publications
YearPublication
2021Howard, N.P., Peace, C., Silverstein, K.A.T. et al. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Hortic Res 8, 202 (2021). https://doi.org/10.1038/s41438-021-00637-5
Snp Genotype Data
Total 10,295 records
Download Table
#DatasetMarker NameAlleleGenotype
1Apple_SNP_genotype_Howard_2021SNP_FB_0941503T/CA | B
2Apple_SNP_genotype_Howard_2021SNP_FB_0941510T/CA | A
3Apple_SNP_genotype_Howard_2021SNP_FB_0423029A/GA | A
4Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_GA_14519247_Lg1_RosCOS2921_MAF50_476406_exon1A/GA | B
5Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_AG_14529153_Lg1_RosCOS2921_MAF30_59140_exon1T/CA | A
6Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_GA_14545022_Lg1_RosCOS2921_MAF10_504165_exon1T/CA | B
7Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_TG_14699213_Lg1_RosCOS1779_MAF50_MDP0000321447_exon9T/GA | A
8Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_CT_14708397_Lg1_RosCOS1779_MAF40_343966_exon1T/CA | B
9Apple_SNP_genotype_Howard_2021SNP_FB_1080637T/CA | A
10Apple_SNP_genotype_Howard_2021SNP_FB_1080640T/CB | B
11Apple_SNP_genotype_Howard_2021SNP_FB_1080641A/GB | B
12Apple_SNP_genotype_Howard_2021GDsnp01500T/CA | B
13Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_TC_14798027_Lg1_01500_MAF50_67147_exon1T/CA | B
14Apple_SNP_genotype_Howard_2021SNP_FB_0423612T/GA | A
15Apple_SNP_genotype_Howard_2021SNP_FB_0423614T/CB | B
16Apple_SNP_genotype_Howard_2021SNP_FB_0423615T/CA | B
17Apple_SNP_genotype_Howard_2021SNP_FB_0423617T/CB | B
18Apple_SNP_genotype_Howard_2021SNP_FB_0423624T/CA | B
19Apple_SNP_genotype_Howard_2021SNP_FB_0423631A/GA | A
20Apple_SNP_genotype_Howard_2021SNP_FB_0423637T/CA | A
21Apple_SNP_genotype_Howard_2021SNP_FB_0974443T/CA | B
22Apple_SNP_genotype_Howard_2021SNP_FB_0424557T/CB | B
23Apple_SNP_genotype_Howard_2021SNP_FB_0424562A/GB | B
24Apple_SNP_genotype_Howard_2021SNP_FB_0425611A/GA | A
25Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_AC_16467823_Lg1_00107_MAF20_MDP0000182344_exon2T/GA | A
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Maternal Parent Of
Germplasm Name Description Type
Spartanaccession
TelamonHas a columnar tree form.accession
Empireaccession
Early Cortlandaccession
Fantazjaaccession
Jonamacaccession
Macounaccession
Melbaaccession
PRI 1661-1accession
PRI 1661-2accession
Sharonaccession
10C-10-19accession
PRI2-19accession
Spenceraccession
Bancroftaccession
Niagaraaccession
Bates Loboaccession
Charlotteaccession
Scotiaaccession
Colletaccession
Barryaccession
Belle de Mleievaccession
Brusnichnoeaccession
Franklinaccession
Joyceaccession
Merton Charmaccession
Mezenskoyeaccession
Northlandaccession
Olimpiyskoyeaccession
Orlikaccession
Orlovskaja Girljandaaccession
Orlovskaya Zaryaaccession
Orlovskoe Polosatoeaccession
PRI 1661_1accession
PRI 1661_2accession
PRI 388_14accession
Tydemans Early Worcesteraccession
Unnamed 1974_496accession
Utrennyaya Zvezdaaccession
Victoryaccession
Phenotypic Data
Phenotypic Data
Total 226 trait scores
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# Dataset Descriptor Value
1Apple_CRS_phenotyping_2012A1_N_2020.4269952
2Apple_CRS_phenotyping_2012A2_N_075.2050048
3Apple_CRS_phenotyping_2012A2_N_1043.0050432
4Apple_CRS_phenotyping_2012A2_N_2036.6790976
5Apple_CRS_phenotyping_2012A3_N_00
6Apple_CRS_phenotyping_2012A3_N_100
7Apple_CRS_phenotyping_2012A3_N_200
8Apple_CRS_phenotyping_2012E2_N_095.978944
9Apple_CRS_phenotyping_2012E2_N_1050.5088192
10Apple_CRS_phenotyping_2012E2_N_2040.8735616
11Apple_CRS_phenotyping_2012Cn_0172.113
12Apple_CRS_phenotyping_2012Cn_1085.1026
13Apple_CRS_phenotyping_2012Cn_2049.3048
14Apple_CRS_phenotyping_2012QF_052.8502
15Apple_CRS_phenotyping_2012QF_10-116.4346
16Apple_CRS_phenotyping_2012QF_20-167.4424
17Apple_CRS_phenotyping_2012Grease_01
18Apple_CRS_phenotyping_2012Grease_103
19Apple_CRS_phenotyping_2012Grease_201
20Apple_CRS_phenotyping_2012Shrivel_01
21Apple_CRS_phenotyping_2012Shrivel_101
22Apple_CRS_phenotyping_2012Shrivel_201
23Apple_CRS_phenotyping_2012Scald_01
24Apple_CRS_phenotyping_2012Scald_101
25Apple_CRS_phenotyping_2012Scald_202
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Paternal Parent Of
Germplasm Name Description Type
PCF-3-120accession
Regentaccession
Miltonaccession
Early McIntoshaccession
Antonovka OB NTTT2accession
Carnetaccession
Cortlandaccession
Kyokkoaccession
Morozovskoyeaccession
Orlovskoye Zimneeaccession
Slava Pobeditelyamaccession