Maldo.hc.v1a1.ch16A.g19689.t1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following intron feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: gb|PQP91960.1| (uncharacterized protein Pyn_29124 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 142.124 bits (357), Expect = 5.101e-39 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 35 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 117
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: ref|XP_038712997.1| (putative polyketide hydroxylase isoform X2 [Tripterygium wilfordii]) HSP 1 Score: 142.51 bits (358), Expect = 1.725e-37 Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNT+LS+QNFRAAMAVPA LGLDPT ANSVH IINEGVGSILP GLQR +LDGIFT+GRA LSESLLNENNPLGSS+
Sbjct: 417 RRPIAIFNTKLSVQNFRAAMAVPAALGLDPTVANSVHHIINEGVGSILPSGLQRAVLDGIFTLGRAQLSESLLNENNPLGSSR 499
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: gb|KAF5741146.1| (hypothetical protein HS088_TW10G00141 [Tripterygium wilfordii]) HSP 1 Score: 143.665 bits (361), Expect = 1.901e-37 Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNT+LS+QNFRAAMAVPA LGLDPT ANSVH IINEGVGSILP GLQR +LDGIFT+GRA LSESLLNENNPLGSS+
Sbjct: 481 RRPIAIFNTKLSVQNFRAAMAVPAALGLDPTVANSVHHIINEGVGSILPSGLQRAVLDGIFTLGRAQLSESLLNENNPLGSSR 563
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: ref|XP_038712996.1| (putative polyketide hydroxylase isoform X1 [Tripterygium wilfordii]) HSP 1 Score: 143.28 bits (360), Expect = 2.064e-37 Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNT+LS+QNFRAAMAVPA LGLDPT ANSVH IINEGVGSILP GLQR +LDGIFT+GRA LSESLLNENNPLGSS+
Sbjct: 417 RRPIAIFNTKLSVQNFRAAMAVPAALGLDPTVANSVHHIINEGVGSILPSGLQRAVLDGIFTLGRAQLSESLLNENNPLGSSR 499
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: gb|KAB2620363.1| (hypothetical protein D8674_042564 [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 141.739 bits (356), Expect = 3.282e-37 Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IA+FNTELSI+NF+AAMAVPA LGLDPT ANSVHR+INEGVGSILP LQR ILDGIFTIGRA LSESLLNENNPLGSS+
Sbjct: 415 RRPIAVFNTELSIENFKAAMAVPAALGLDPTVANSVHRVINEGVGSILPSELQRAILDGIFTIGRAQLSESLLNENNPLGSSR 497
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: ref|XP_034201575.1| (2,4-dichlorophenol 6-monooxygenase isoform X2 [Prunus dulcis]) HSP 1 Score: 141.739 bits (356), Expect = 5.739e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 343 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 425
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: emb|VVA13192.1| (PREDICTED: 2 4-dichlorophenol 6-monooxygenase [Prunus dulcis]) HSP 1 Score: 141.739 bits (356), Expect = 7.153e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 478 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 560
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: emb|CAB4263949.1| (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 141.739 bits (356), Expect = 7.548e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 427 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 509
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: dbj|BBG93911.1| (FAD/NAD(P)-binding oxidoreductase family protein [Prunus dulcis]) HSP 1 Score: 141.739 bits (356), Expect = 7.637e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 451 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 533
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Match: gb|TQE09287.1| (hypothetical protein C1H46_005222 [Malus baccata]) HSP 1 Score: 140.198 bits (352), Expect = 7.637e-37 Identity = 68/83 (81.93%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IA+FNTELSI+NF+AAMAVPA LGLDPT ANSVHR+INEGVGSILP LQR ILDGIFTIGRA LSES LNENNPLGSS+
Sbjct: 415 RRPIAVFNTELSIENFKAAMAVPAALGLDPTVANSVHRVINEGVGSILPSVLQRAILDGIFTIGRAQLSESFLNENNPLGSSR 497
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A314XJX0_PRUYE (FAD_binding_3 domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_29124 PE=4 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.454e-39 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 35 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 117
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A7J7D513_TRIWF (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW10G00141 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.143e-38 Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNT+LS+QNFRAAMAVPA LGLDPT ANSVH IINEGVGSILP GLQR +LDGIFT+GRA LSESLLNENNPLGSS+
Sbjct: 481 RRPIAIFNTKLSVQNFRAAMAVPAALGLDPTVANSVHHIINEGVGSILPSGLQRAVLDGIFTLGRAQLSESLLNENNPLGSSR 563
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A5N5H0S2_9ROSA (FAD_binding_3 domain-containing protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_042564 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.579e-37 Identity = 69/83 (83.13%), Postives = 76/83 (91.57%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IA+FNTELSI+NF+AAMAVPA LGLDPT ANSVHR+INEGVGSILP LQR ILDGIFTIGRA LSESLLNENNPLGSS+
Sbjct: 415 RRPIAVFNTELSIENFKAAMAVPAALGLDPTVANSVHRVINEGVGSILPSELQRAILDGIFTIGRAQLSESLLNENNPLGSSR 497
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A5E4ECG5_PRUDU (PREDICTED: 2 4-dichlorophenol 6-monooxygenase OS=Prunus dulcis OX=3755 GN=ALMOND_2B022212 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.441e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 478 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 560
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A6J5TJW7_PRUAR (FAD_binding_3 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS5369 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.631e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 427 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 509
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A4Y1QQ17_PRUDU (FAD/NAD(P)-binding oxidoreductase family protein OS=Prunus dulcis OX=3755 GN=Prudu_002063 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.674e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 451 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 533
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A540NE16_MALBA (FAD_binding_3 domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_005222 PE=4 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 3.674e-37 Identity = 68/83 (81.93%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IA+FNTELSI+NF+AAMAVPA LGLDPT ANSVHR+INEGVGSILP LQR ILDGIFTIGRA LSES LNENNPLGSS+
Sbjct: 415 RRPIAVFNTELSIENFKAAMAVPAALGLDPTVANSVHRVINEGVGSILPSVLQRAILDGIFTIGRAQLSESFLNENNPLGSSR 497
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A6J5W4G4_PRUAR (FAD_binding_3 domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS5796 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.703e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 427 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 509
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A6P5S219_PRUAV (uncharacterized protein LOC110753139 OS=Prunus avium OX=42229 GN=LOC110753139 PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.727e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 416 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 498
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Match: A0A5E4EBL0_PRUDU (PREDICTED: 2 4-dichlorophenol 6-monooxygenase OS=Prunus dulcis OX=3755 GN=ALMOND_2B022212 PE=4 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.544e-37 Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IAIFNTELSIQNF+AAM VPA LGLDPT ANSVH++INEGVGSILP GLQR ILDGIFTIGRA LSESLLNE NPLGSS+
Sbjct: 416 RRPIAIFNTELSIQNFKAAMTVPAALGLDPTVANSVHQVINEGVGSILPSGLQRAILDGIFTIGRAQLSESLLNEKNPLGSSR 498
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. Araport11
Match: AT1G24340.1 (| FAD/NAD(P)-binding oxidoreductase family protein | Chr1:8635416-8638866 FORWARD LENGTH=709 | 201606) HSP 1 Score: 120.939 bits (302), Expect = 1.966e-33 Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 0
Query: 2 KQNIAIFNTELSIQNFRAAMAVPAVLGLDPTTANSVHRIINEGVGSILPYGLQRVILDGIFTIGRAPLSESLLNENNPLGSSK 84
++ IA+ NT LS+QNFRAAM+VP+ LGLDPT ANSVHR IN+ VGSILP GLQ+ ILD +F +GRA LSESLLNE+NPLG+ +
Sbjct: 416 RRPIALSNTSLSVQNFRAAMSVPSALGLDPTVANSVHRFINKTVGSILPTGLQKAILDNVFALGRAQLSESLLNESNPLGNQR 498 The following BLAST results are available for this feature:
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. NCBI nr
Analysis Date: 2022-10-19 (Blastp of Malus x domestica ‘Honeycrisp’ v1.1 proteins vs NCBI nr) Total hits: 10
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Analysis Date: 2022-10-19 (Blastp of Malus x domestica ‘Honeycrisp’ v1.1 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. ExPASy TrEMBL
Analysis Date: 2022-10-19 (Blastp of Malus x domestica ‘Honeycrisp’ v1.1 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Maldo.hc.v1a1.ch16A.g19689.t1 vs. Araport11
Analysis Date: 2022-10-19 (Blastp of Malus x domestica ‘Honeycrisp’ v1.1 proteins vs Araport11) Total hits: 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1 ID=Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1; Name=Maldo.hc.v1a1.ch16A.g19689.t1; organism=Malus x domestica; type=mRNA; length=261bpback to top protein sequence of Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1 >Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1 ID=Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1; Name=Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1; organism=Malus x domestica; type=polypeptide; length=86bpback to top mRNA from alignment at chr16A:7435471..7435915- Legend: polypeptideCDSexonintron Hold the cursor over a type above to highlight its positions in the sequence below.>Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1 ID=Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1; Name=Maldo.hc.v1a1.ch16A.g19689.t1; organism=Malus x domestica; type=mRNA; length=445bp; location=Sequence derived from: chr16A:7435471..7435915- (Malus x domesticaback to top Coding sequence (CDS) from alignment at chr16A:7435471..7435915- >Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1 ID=Maldo.hc.v1a1.ch16A.g19689.t1_hon_v1; Name=Maldo.hc.v1a1.ch16A.g19689.t1; organism=Malus x domestica; type=CDS; length=261bp; location=Sequence derived from: chr16A:7435471..7435915- (Malus x domesticaback to top |