Apple_HCGA_F1

Map Overview

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NameApple_HCGA_F1
SpeciesMalus x domestica
SoftwareJoinmap4.1
Population typeF1
Map typegenetic
Map unitcM
Paternal parentTwin Bee Gala
Population size125
Number of loci1042
Number of linkage groups17
Publication[view all]
ContactJames Luby
Stock
NameTypeDetails
Honeycrisp_x_Twin Bee Gala-F1population
Origin detail:University of Minnesota
Population size:125
Contact
NameDetails
James Luby
First name:James
Last name:Luby
Institution:Department of Horticultural Science, University of Minnesota, St. Paul, MN
Address:St Paul, MN 55104
Country:United States
Email:lubyx001@umn.edu
Map Loci
This map contains 1,042 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_32751652_Lg10_RosCOS3231_MAF40_MDP0000317596_exon2SNP_CT_32751652_Lg10_RosCOS3231_MAF40_MDP0000317596_exon2marker_locus9.77 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_TC_32157764_Lg10_257441__257441_exon2SNP_TC_32157764_Lg10_257441__257441_exon2marker_locus11.4 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_AG_32412374_Lg10_RosCOS2362_MAF50_218348_exon1SNP_AG_32412374_Lg10_RosCOS2362_MAF50_218348_exon1marker_locus11.4 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_AG_32378216_Lg10_RosCOS2362_MAF30_461155_exon1SNP_AG_32378216_Lg10_RosCOS2362_MAF30_461155_exon1marker_locus11.4 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_TG_32157811_Lg10_257441__257441_exon2SNP_TG_32157811_Lg10_257441__257441_exon2marker_locus11.4 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_GA_32372997_Lg10_RosCOS2362_MAF20_1643940_exon1SNP_GA_32372997_Lg10_RosCOS2362_MAF20_1643940_exon1marker_locus11.4 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_AG_31707563_Lg10_00099_MAF50_950228_exon1SNP_AG_31707563_Lg10_00099_MAF50_950228_exon1marker_locus14.58 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_31331375_Lg10_01961_MAF50_1619986_exon1SNP_CT_31331375_Lg10_01961_MAF50_1619986_exon1marker_locus14.7 cM
Apple_HCGA_F1.10GDsnp00099GDsnp00099marker_locus14.7 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_28632998_Lg10_CONS61_MAF50_412419_exon1SNP_CT_28632998_Lg10_CONS61_MAF50_412419_exon1marker_locus21.55 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_29044684_Lg10_01570_MAF30_1643794_exon1SNP_CT_29044684_Lg10_01570_MAF30_1643794_exon1marker_locus21.55 cM
Apple_HCGA_F1.10GDsnp00257GDsnp00257marker_locus22.35 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_TG_28610777_Lg10_CONS61_MAF10_1659422_exon7SNP_TG_28610777_Lg10_CONS61_MAF10_1659422_exon7marker_locus22.35 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_TC_28578617_Lg10_00257_MAF10_MDP0000372941_exon1SNP_TC_28578617_Lg10_00257_MAF10_MDP0000372941_exon1marker_locus22.35 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_AG_28354774_Lg10_148145_MAF30_148145_exon2SNP_AG_28354774_Lg10_148145_MAF30_148145_exon2marker_locus23.16 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_GA_28354787_Lg10_148145_MAF30_148145_exon2SNP_GA_28354787_Lg10_148145_MAF30_148145_exon2marker_locus23.16 cM
Apple_HCGA_F1.10GDsnp01264GDsnp01264marker_locus24.78 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_27656951_Lg10_268464__268464_exon1SNP_CT_27656951_Lg10_268464__268464_exon1marker_locus24.78 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_17043353_Lg10_02009_MAF30_1651924_exon5SNP_CT_17043353_Lg10_02009_MAF30_1651924_exon5marker_locus40.66 cM
Apple_HCGA_F1.10GDsnp02009GDsnp02009marker_locus40.66 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_GT_17038357_Lg10_02009_MAF10_1646186_exon3SNP_GT_17038357_Lg10_02009_MAF10_1646186_exon3marker_locus40.66 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CA_16731889_Lg10_01710_MAF20_459289_exon1SNP_CA_16731889_Lg10_01710_MAF20_459289_exon1marker_locus41.46 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_CT_16729529_Lg10_01710_MAF40_703557_exon1SNP_CT_16729529_Lg10_01710_MAF40_703557_exon1marker_locus41.46 cM
Apple_HCGA_F1.10RosBREEDSNP_SNP_AG_16726719_Lg10_01710_MAF40_1666563_exon2SNP_AG_16726719_Lg10_01710_MAF40_1666563_exon2marker_locus41.46 cM
Apple_HCGA_F1.10GDsnp00015GDsnp00015marker_locus42.27 cM
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