Apple-OA-F1-Orin | GDR

Map Overview


Name	Apple-OA-F1-Orin
Species	Malus x domestica
Analysis method	double pseudo-testcross mapping
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Orin
Paternal parent	Akane
Number of loci	251
Number of QTL	16
Number of linkage groups	17
Publication	[view all]
Contact	Miyuki Kunihisa

Stock

Name

Type

Details

Orin_x_Akane-F1

population

Contact

Name

Details

Miyuki Kunihisa

First name:	Miyuki
Last name:	Kunihisa
Institution:	NARO Institute of Fruit Tree Science
Address:	2-1 Fujimoto, Tsukuba, Ibaraki 305-8605
Country:	Japan
Email:	miyuky@affrc.go.jp
Phone:	81-29-838-6437
Keywords:	fruit drop

Publication


Year	Publications
2014	Kunihisa M, Moriya S, Abe K, Okada K, Haji T, Hayashi T, Kim H, Nishitani C, Terakami S, Yamamoto T. Identification of QTLs for fruit quality traits in Japanese apples: QTLs for early ripening are tightly related to preharvest fruit drop. Breeding science. 2014 Sep; 64(3):240-51.

Map Loci

This map contains 251 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-OA-F1-Orin.OR5	MEST109	MEST109	marker_locus	64.8 cM
Apple-OA-F1-Orin.OR5	Hi02a03	Hi02a03	marker_locus	65.5 cM
Apple-OA-F1-Orin.OR6	Hi08g03	Hi08g03	marker_locus	0 cM
Apple-OA-F1-Orin.OR6	Hi05d10	Hi05d10	marker_locus	11.5 cM
Apple-OA-F1-Orin.OR6	CN4455290SSR	CN4455290SSR	marker_locus	30.3 cM
Apple-OA-F1-Orin.OR6	IPPN18	IPPN18	marker_locus	38.7 cM
Apple-OA-F1-Orin.OR6	TsuENH126	TsuENH126	marker_locus	39.4 cM
Apple-OA-F1-Orin.OR6	MEST148	MEST148	marker_locus	39.8 cM
Apple-OA-F1-Orin.OR6	Hi03a03	Hi03a03	marker_locus	46.4 cM
Apple-OA-F1-Orin.OR6	Hi07b06	Hi07b06	marker_locus	47.1 cM
Apple-OA-F1-Orin.OR7	NZmsEB107305-ml-2	NZmsEB107305-ml-2	marker_locus	0 cM
Apple-OA-F1-Orin.OR7	CN444794SSR	CN444794SSR	marker_locus	5.3 cM
Apple-OA-F1-Orin.OR7	SAmsCN927330	SAmsCN927330	marker_locus	7.5 cM
Apple-OA-F1-Orin.OR7	TsuENH218	TsuENH218	marker_locus	18.3 cM
Apple-OA-F1-Orin.OR7	Hi03a10	Hi03a10	marker_locus	19 cM
Apple-OA-F1-Orin.OR7	SAmsCN903950	SAmsCN903950	marker_locus	22.1 cM
Apple-OA-F1-Orin.OR7	NZmsEE663789	NZmsEE663789	marker_locus	27.8 cM
Apple-OA-F1-Orin.OR7	Mdo.chr1.06	Mdo.chr1.06	marker_locus	34.2 cM
Apple-OA-F1-Orin.OR7	TsuENH130	TsuENH130	marker_locus	44.1 cM
Apple-OA-F1-Orin.OR7	Mdo.chr1.09-2	Mdo.chr1.09-2	marker_locus	44.9 cM
Apple-OA-F1-Orin.OR7	TsuENH157-2	TsuENH157-2	marker_locus	44.9 cM
Apple-OA-F1-Orin.OR7	SAmsC0756781	SAmsC0756781	marker_locus	67.2 cM
Apple-OA-F1-Orin.OR8	MEST101	MEST101	marker_locus	0 cM
Apple-OA-F1-Orin.OR8	NZmsEB177006	NZmsEB177006	marker_locus	3.8 cM
Apple-OA-F1-Orin.OR8	CH01c06	CH01c06	marker_locus	19 cM

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Map QTL

This map contains 16 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
Apple-OA-F1-Orin.OR15	qHD.OA-ch15-Orin	QTL	-	-	66.2 cM
Apple-OA-F1-Orin.OR16	qHD.OA-ch16-Orin	QTL	-	-	27.6 cM
Apple-OA-F1-Orin.OR2	qRC.OA-ch2-Orin	QTL	-	-	1 cM
Apple-OA-F1-Orin.OR4	qRP.OA-ch4-Orin	QTL	-	-	53.9 cM
Apple-OA-F1-Orin.OR8	qRP.OA-ch8-Orin	QTL	-	-	37.6 cM
Apple-OA-F1-Orin.OR15	qFRJUC.OA-ch15-Orin	QTL	-	-	39.2 cM
Apple-OA-F1-Orin.OR16	qFRJUC.OA-ch16-Orin	QTL	-	-	14.1 cM
Apple-OA-F1-Orin.OR10	qFRFRM.OA-ch10-Orin	QTL	-	-	47 cM
Apple-OA-F1-Orin.OR11	qFRFRM.OA-ch11-Orin	QTL	-	-	6.3 cM
Apple-OA-F1-Orin.OR15	qPFD.OA-ch15-Orin	QTL	-	-	62.5 cM
Apple-OA-F1-Orin.OR16	qTITA.OA-ch16-Orin	QTL	-	-	8.6 cM
Apple-OA-F1-Orin.OR15	qSSC.OA-ch15-Orin	QTL	-	-	62.5 cM
Apple-OA-F1-Orin.OR16	qSSC.OA-ch16-Orin	QTL	-	-	16.6 cM
Apple-OA-F1-Orin.OR12	qSOR.OA-ch12-Orin	QTL	-	-	23.6 cM
Apple-OA-F1-Orin.OR10	qJB.OA-ch10-Orin	QTL	-	-	54.6 cM
Apple-OA-F1-Orin.OR8	qFD.OA-ch8-Orin	QTL	-	-	38.3 cM

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