Beacon

Germplasm Overview
NameBeacon
AliasN/A
GRIN IDPI 589885
TypeCultivar
SpeciesMalus x domestica
DescriptionDessert cultivar
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentMalinda
Paternal ParentN/A
Maternal Parent ofN/A
Paternal Parent ofN/A
Phenotypic Data[view all 229]
SSR Genotype Data[view all 3]
SNP Genotype Data[view all 7559]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceN/A
Ssr Genotype Data
Total 3 records
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# Dataset Marker Marker Type Genotype Marker_Allele
1Apple_CRS_genotyping_SSR_2010CH05c06genetic_marker104|110CH05c06_104; CH05c06_110
2Apple_CRS_genotyping_SSR_2010Hi04e04genetic_marker216|225Hi04e04_216; Hi04e04_225
3Apple_CRS_genotyping_SSR_2010Md-Exp7genetic_marker202|210Md-Exp7_202; Md-Exp7_210
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Snp Genotype Data
Total 7,559 records
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#DatasetMarker NameAlleleGenotype
1Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_17248573_Lg1_RosCOS3372_MAF40_MDP0000577125_exon3T/CTT
2Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_17245435_Lg1_RosCOS3372_MAF10_1674115_exon1T/CCT
3Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_17242135_Lg1_RosCOS3372_MAF20_616940_exon1T/CCT
4Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_17238705_Lg1_RosCOS3372_MAF10_180981_exon1A/GGA
5Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_17233926_Lg1_RosCOS3372_MAF30_1683554_exon2A/GAG
6Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_17266223_Lg1_RosCOS3372_MAF50_1664877_exon2T/CCC
7Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_17264077_Lg1_RosCOS3372_MAF50_762097_exon1T/GGT
8Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_17912183_Lg1_00440_MAF40_1634418_exon1T/CCC
9Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_17882923_Lg1_00440_MAF40_1646533_exon1A/CAC
10Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TG_17880738_Lg1_00440_MAF20_944294_exon1T/GTG
11Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_17878675_Lg1_00440_MAF10_1638976_exon6A/GAA
12Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_17876384_Lg1_00440_MAF10_360249_exon1T/CTT
13Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_17871172_Lg1_00440_MAF30_1636772_exon2T/CTC
14Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_17869158_Lg1_00440_MAF30_MDP0000190950_exon2T/GGT
15Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_17921038_Lg1_00440_MAF50_527792_exon4T/CCC
16Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_18056530_Lg1_01783_MAF30_1629293_exon3T/GGT
17Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_18064090_Lg1_01783_MAF50_708296_exon1T/GGT
18Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_18067488_Lg1_01783_MAF40_MDP0000211915_exon1A/GAG
19Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_18093819_Lg1_01783_MAF10_1653849_exon8T/CAA
20Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1A/CAA
21Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_18695269_Lg1_00183_MAF20_MDP0000404072_exon1A/CAA
22Dessert_and_cider_core_collections_8k_SNPGDsnp00183T/CTC
23Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_18719697_Lg1_00183_MAF20_MDP0000284030_exon1T/GTT
24Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_18794918_Lg1_02731_MAF30_1632516_exon5T/CTT
25Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_18791535_Lg1_02731_MAF40_MDP0000186097_exon1A/GGA
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Cross References
External references for this accession
DatabaseAccession
GRINPI 589885
Fruit and Nut Cultivars Database11141
Phenotypic Data
Phenotypic Data
Total 229 trait scores
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# Dataset Descriptor Value
1Apple_CRS_phenotyping_2011WaterCore_201
2Apple_CRS_phenotyping_2011MoldyCore_00
3Apple_CRS_phenotyping_2011MoldyCore_100
4Apple_CRS_phenotyping_2011MoldyCore_200
5Apple_CRS_phenotyping_2011Maturity_02
6Apple_CRS_phenotyping_2011Maturity_202.5
7Apple_CRS_phenotyping_2011Firm_02.75
8Apple_CRS_phenotyping_2011Firm_202.25
9Apple_CRS_phenotyping_2011Crisp_01.75
10Apple_CRS_phenotyping_2011Crisp_201.75
11Apple_CRS_phenotyping_2011Juice_02.25
12Apple_CRS_phenotyping_2011Juice_202
13Apple_CRS_phenotyping_2011Aroma_03.5
14Apple_CRS_phenotyping_2011Aroma_202.5
15Apple_CRS_phenotyping_2011Sweet_03.75
16Apple_CRS_phenotyping_2011Sweet_202.75
17Apple_CRS_phenotyping_2011Acidity_02.25
18Apple_CRS_phenotyping_2011Acidity_201.75
19Apple_CRS_phenotyping_2011SSC_011.45
20Apple_CRS_phenotyping_2011SSC_1010
21Apple_CRS_phenotyping_2011SSC_2010.8
22Apple_CRS_phenotyping_2011TA_00.4849
23Apple_CRS_phenotyping_2011TA_100.2342
24Apple_CRS_phenotyping_2011TA_200.1273
25Apple_CRS_phenotyping_2011pH_03.58
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