Beacon

Germplasm Overview
NameBeacon
AliasN/A
GRIN IDPI 589885
TypeCultivar
SpeciesMalus x domestica
DescriptionDessert cultivar
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentMalinda
Paternal ParentN/A
Maternal Parent ofN/A
Paternal Parent ofN/A
Phenotypic Data[view all 229]
SSR Genotype Data[view all 3]
SNP Genotype Data[view all 7559]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceN/A
Ssr Genotype Data
Total 3 records
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# Dataset Marker Marker Type Genotype Marker_Allele
1Apple_CRS_genotyping_SSR_2010CH05c06genetic_marker104|110CH05c06_104; CH05c06_110
2Apple_CRS_genotyping_SSR_2010Hi04e04genetic_marker216|225Hi04e04_216; Hi04e04_225
3Apple_CRS_genotyping_SSR_2010Md-Exp7genetic_marker202|210Md-Exp7_202; Md-Exp7_210
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Snp Genotype Data
Total 7,559 records
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#DatasetMarker NameAlleleGenotype
1Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_13093630_Lg1_01494_MAF40_470106_exon1T/CAA
2Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_14001081_Lg1_01889_MAF20_MDP0000824791_exon1T/CTT
3Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_14003645_Lg1_01889_MAF10_43738_exon1A/GAA
4Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_14006533_Lg1_01889_MAF20_MDP0000263325_exon3T/CTC
5Dessert_and_cider_core_collections_8k_SNPGDsnp01889T/CTT
6Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TG_14148062_Lg1_01058_MAF10_1670627_exon2T/GTG
7Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_14154922_Lg1_01058_MAF30_1682312_exon1T/CAG
8Dessert_and_cider_core_collections_8k_SNPGDsnp00703T/CTC
9Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_14181277_Lg1_01058_MAF10_475083_exon3T/CTC
10Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_14484104_Lg1_RosCOS2921_MAF40_745486_exon1T/CCT
11Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_14545022_Lg1_RosCOS2921_MAF10_504165_exon1T/CGA
12Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_14521599_Lg1_RosCOS2921_MAF10_382250_exon1A/GGA
13Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_14708397_Lg1_RosCOS1779_MAF40_343966_exon1T/CCT
14Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TG_14699213_Lg1_RosCOS1779_MAF50_MDP0000321447_exon9T/GTT
15Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_14692393_Lg1_RosCOS1779_MAF20_696852_exon1T/CAA
16Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_14687444_Lg1_RosCOS1779_MAF20_679337_exon1T/CTT
17Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_14685033_Lg1_RosCOS1779_MAF10_1667983_exon1T/GGT
18Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_14662213_Lg1_RosCOS1779_MAF30_MDP0000321450_exon1A/GCT
19Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_14798027_Lg1_01500_MAF50_67147_exon1T/CTC
20Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_14836061_Lg1_01500_MAF40_1621531_exon3A/GGA
21Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_14825678_Lg1_01500_MAF10_MDP0000245017_exon3A/GGA
22Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_16467823_Lg1_00107_MAF20_MDP0000182344_exon2T/GAC
23Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_16501559_Lg1_00107_MAF30_1618955_exon2T/CGA
24Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_16519052_Lg1_00107_MAF10_1644262_exon1A/GAA
25Dessert_and_cider_core_collections_8k_SNPGDsnp02538T/CTC
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Cross References
External references for this accession
DatabaseAccession
GRINPI 589885
Fruit and Nut Cultivars Database11141
Phenotypic Data
Phenotypic Data
Total 229 trait scores
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# Dataset Descriptor Value
1Apple_CRS_phenotyping_2011E2_N_1051.211485866736
2Apple_CRS_phenotyping_2011E2_N_2049.8745344
3Apple_CRS_phenotyping_2011Cn_087.674
4Apple_CRS_phenotyping_2011Cn_1038.304
5Apple_CRS_phenotyping_2011Cn_2022.1858
6Apple_CRS_phenotyping_2011QF_037.3882
7Apple_CRS_phenotyping_2011QF_10-118.2604
8Apple_CRS_phenotyping_2011QF_20-76.7656
9Apple_CRS_phenotyping_2011Grease_01
10Apple_CRS_phenotyping_2011Grease_102
11Apple_CRS_phenotyping_2011Grease_203
12Apple_CRS_phenotyping_2011Shrivel_01
13Apple_CRS_phenotyping_2011Shrivel_101
14Apple_CRS_phenotyping_2011Shrivel_201
15Apple_CRS_phenotyping_2011Scald_01
16Apple_CRS_phenotyping_2011Scald_103
17Apple_CRS_phenotyping_2011Scald_202
18Apple_CRS_phenotyping_2011BitterPit_01
19Apple_CRS_phenotyping_2011BitterPit_101
20Apple_CRS_phenotyping_2011BitterPit_201
21Apple_CRS_phenotyping_2011IntBrown_01
22Apple_CRS_phenotyping_2011IntBrown_102
23Apple_CRS_phenotyping_2011IntBrown_201
24Apple_CRS_phenotyping_2011WaterCore_01
25Apple_CRS_phenotyping_2011WaterCore_101
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