Beacon

Germplasm Overview
NameBeacon
AliasN/A
GRIN IDPI 589885
TypeCultivar
SpeciesMalus x domestica
DescriptionDessert cultivar
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentMalinda
Paternal ParentN/A
Maternal Parent ofN/A
Paternal Parent ofN/A
Phenotypic Data[view all 229]
SSR Genotype Data[view all 3]
SNP Genotype Data[view all 7559]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceN/A
Ssr Genotype Data
Total 3 records
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# Dataset Marker Marker Type Genotype Marker_Allele
1Apple_CRS_genotyping_SSR_2010CH05c06genetic_marker104|110CH05c06_104; CH05c06_110
2Apple_CRS_genotyping_SSR_2010Hi04e04genetic_marker216|225Hi04e04_216; Hi04e04_225
3Apple_CRS_genotyping_SSR_2010Md-Exp7genetic_marker202|210Md-Exp7_202; Md-Exp7_210
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Snp Genotype Data
Total 7,559 records
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#DatasetMarker NameAlleleGenotype
1Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_33651725_Lg1_01371_MAF30_328158_exon1YCC
2Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_33682524_Lg1_01371_MAF20_74867_exon1A/CAA
3Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_33678768_Lg1_01371_MAF20_250261_exon1T/CTT
4Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1T/CCC
5Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_33699826_Lg1_01371_MAF10_MDP0000282836_exon15T/CTT
6Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CA_33707916_Lg1_01371_MAF10_1658573_exon3A/CAA
7Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_34421998_Lg1_19307__19307_exon2T/CTT
8Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_34439805_Lg1_02371_MAF40_MDP0000282186_exon3T/CCC
9Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_34453757_Lg1_02371_MAF20_MDP0000286439_exon1A/GAA
10Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_34470881_Lg1_02371_MAF20_566613_exon1T/CTT
11Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TG_34487221_Lg1_02371_MAF10_MDP0000194123_exon7T/GTT
12Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_34510440_Lg1_02371_MAF50_1642607_exon7T/GCC
13Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1T/CCT
14Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_35199556_Lg1_00495_MAF20_1626251_exon1T/CCT
15Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_35197485_Lg1_00495_MAF10_1665417_exon1YCT
16Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_35195077_Lg1_00495_MAF20_MDP0000302199_exon8T/CTC
17Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_35192538_Lg1_00495_MAF30_MDP0000302199_exon5A/GAG
18Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_35236523_Lg1_00495_MAF40_1666199_exon3YTC
19Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_35228619_Lg1_00495_MAF10_1639494_exon2T/CTT
20Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_35428600_Lg1_02092_MAF40_1632735_exon1T/CCT
21Dessert_and_cider_core_collections_8k_SNPGDsnp02092T/CAG
22Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_35492705_Lg1_02092_MAF50_1666970_exon1A/GGA
23Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_35616825_Lg1_MDP0000950316_MAF30_MDP0000950316_exon2A/GTC
24Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_35617576_Lg1_MDP0000950316_MAF20_MDP0000950316_exon3A/GGA
25Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_35621874_Lg1_MDP0000950316_MAF20_MDP0000950316_exon17A/GAA
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Cross References
External references for this accession
DatabaseAccession
GRINPI 589885
Fruit and Nut Cultivars Database11141
Phenotypic Data
Phenotypic Data
Total 229 trait scores
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# Dataset Descriptor Value
1Apple_CRS_phenotyping_2012E2_N_1058.0028096
2Apple_CRS_phenotyping_2012E2_N_2042.1376832
3Apple_CRS_phenotyping_2012Cn_107.4888
4Apple_CRS_phenotyping_2012Cn_201.1256
5Apple_CRS_phenotyping_2012QF_10-40.2968
6Apple_CRS_phenotyping_2012QF_20-114.117
7Apple_CRS_phenotyping_2012Grease_01
8Apple_CRS_phenotyping_2012Grease_103
9Apple_CRS_phenotyping_2012Grease_204
10Apple_CRS_phenotyping_2012Shrivel_01
11Apple_CRS_phenotyping_2012Shrivel_101
12Apple_CRS_phenotyping_2012Shrivel_201
13Apple_CRS_phenotyping_2012Scald_01
14Apple_CRS_phenotyping_2012Scald_101
15Apple_CRS_phenotyping_2012Scald_203
16Apple_CRS_phenotyping_2012BitterPit_01
17Apple_CRS_phenotyping_2012BitterPit_103
18Apple_CRS_phenotyping_2012BitterPit_201
19Apple_CRS_phenotyping_2012IntBrown_01
20Apple_CRS_phenotyping_2012IntBrown_101
21Apple_CRS_phenotyping_2012IntBrown_202
22Apple_CRS_phenotyping_2012WaterCore_01
23Apple_CRS_phenotyping_2012WaterCore_101
24Apple_CRS_phenotyping_2012WaterCore_201
25Apple_CRS_phenotyping_2012MoldyCore_00
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