Beacon

Germplasm Overview
NameBeacon
AliasN/A
GRIN IDPI 589885
TypeCultivar
SpeciesMalus x domestica
DescriptionDessert cultivar
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentMalinda
Paternal ParentN/A
Maternal Parent ofN/A
Paternal Parent ofN/A
Phenotypic Data[view all 229]
SSR Genotype Data[view all 3]
SNP Genotype Data[view all 7559]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceN/A
Ssr Genotype Data
Total 3 records
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# Dataset Marker Marker Type Genotype Marker_Allele
1Apple_CRS_genotyping_SSR_2010CH05c06genetic_marker104|110CH05c06_104; CH05c06_110
2Apple_CRS_genotyping_SSR_2010Hi04e04genetic_marker216|225Hi04e04_216; Hi04e04_225
3Apple_CRS_genotyping_SSR_2010Md-Exp7genetic_marker202|210Md-Exp7_202; Md-Exp7_210
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Snp Genotype Data
Total 7,559 records
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#DatasetMarker NameAlleleGenotype
1Dessert_and_cider_core_collections_8k_SNPGDsnp02731A/CAC
2Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_18833863_Lg1_02731_MAF20_1658885_exon5RAA
3Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_18831803_Lg1_02731_MAF30_MDP0000147688_exon19A/GNN
4Dessert_and_cider_core_collections_8k_SNPGDsnp02302T/CTC
5Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_20951649_Lg1_02302_MAF50_MDP0000470227_exon1T/CTC
6Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_21289759_Lg1_02518_MAF20_1636950_exon6T/CTC
7Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_21291785_Lg1_02518_MAF30_1687981_exon1A/GAG
8Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CA_21327009_Lg1_02518_MAF40_1678261_exon1A/CCA
9Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CA_25690200_Lg1_00087_MAF30_1632262_exon3A/CCA
10Dessert_and_cider_core_collections_8k_SNPGDsnp00087A/GAG
11Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_25721098_Lg1_00087_MAF10_755773_exon1T/CTT
12Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_26223046_Lg1_00674_MAF40_711298_exon1T/GTT
13Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_26243256_Lg1_00674_MAF20_MDP0000730883_exon1YTT
14Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TG_26262680_Lg1_00674_MAF40_1669479_exon3T/GTT
15Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_26256055_Lg1_00674_MAF30_968230_exon1T/CTC
16Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_26287276_Lg1_00674_MAF10_1634016_exon7YTT
17Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_26734911_Lg1_01228_MAF50_MDP0000236938_exon8T/GTT
18Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_26729463_Lg1_01228_MAF30_459491_exon1T/CAG
19Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_26743462_Lg1_01228_MAF20_477610_exon1A/GAG
20Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_26758625_Lg1_01228_MAF10_223072_exon1A/CAA
21Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_26763910_Lg1_01228_MAF40_855624_exon1YTT
22Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1A/GGA
23Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_27060614_Lg1_01693_MAF40_1665698_exon2A/GAG
24Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_27095198_Lg1_01693_MAF30_332314_exon1A/GAG
25Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_27108076_Lg1_01693_MAF30_172317_exon1YCT
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Cross References
External references for this accession
DatabaseAccession
GRINPI 589885
Fruit and Nut Cultivars Database11141
Phenotypic Data
Phenotypic Data
Total 229 trait scores
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# Dataset Descriptor Value
1Apple_CRS_phenotyping_2011pH_103.78
2Apple_CRS_phenotyping_2011pH_204.06
3Apple_CRS_phenotyping_2011MCR_100.179
4Apple_CRS_phenotyping_2011C0_cm_00.0508
5Apple_CRS_phenotyping_2011C0_cm_100.197612
6Apple_CRS_phenotyping_2011C0_cm_200.117856
7Apple_CRS_phenotyping_2012CropLoad4
8Apple_CRS_phenotyping_2012HarvDate08/07/2012
9Apple_CRS_phenotyping_2012HarvestYear2012
10Apple_CRS_phenotyping_2012WeekA
11Apple_CRS_phenotyping_2012Location1
12Apple_CRS_phenotyping_2012GrndCol_01
13Apple_CRS_phenotyping_2012SkinCol_04
14Apple_CRS_phenotyping_2012OvrColType_04
15Apple_CRS_phenotyping_2012PercOvrCol_05
16Apple_CRS_phenotyping_2012Russet_Loc_01
17Apple_CRS_phenotyping_2012RussLoc1_01
18Apple_CRS_phenotyping_2012RussLoc2_00
19Apple_CRS_phenotyping_2012RussLoc3_00
20Apple_CRS_phenotyping_2012RussLoc4_00
21Apple_CRS_phenotyping_2012RussAmt_02
22Apple_CRS_phenotyping_2012Crack_01
23Apple_CRS_phenotyping_2012Shape_06
24Apple_CRS_phenotyping_2012CalyxO_01
25Apple_CRS_phenotyping_2012SunBurn_01
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