Beacon

Germplasm Overview
NameBeacon
AliasN/A
GRIN IDPI 589885
TypeCultivar
SpeciesMalus x domestica
DescriptionDessert cultivar
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentMalinda
Paternal ParentN/A
Maternal Parent ofN/A
Paternal Parent ofN/A
Phenotypic Data[view all 229]
SSR Genotype Data[view all 3]
SNP Genotype Data[view all 7559]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceN/A
Ssr Genotype Data
Total 3 records
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# Dataset Marker Marker Type Genotype Marker_Allele
1Apple_CRS_genotyping_SSR_2010CH05c06genetic_marker104|110CH05c06_104; CH05c06_110
2Apple_CRS_genotyping_SSR_2010Hi04e04genetic_marker216|225Hi04e04_216; Hi04e04_225
3Apple_CRS_genotyping_SSR_2010Md-Exp7genetic_marker202|210Md-Exp7_202; Md-Exp7_210
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Snp Genotype Data
Total 7,559 records
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#DatasetMarker NameAlleleGenotype
1Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CA_35939850_Lg1_12966_MAF20_12966_exon1A/CCA
2Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_1219423_Lg2_00348_MAF20_1649423_exon1T/CTT
3Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_1229074_Lg2_01134_MAF10_1625597_exon3T/CTT
4Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_1237816_Lg2_01134_MAF20_1625352_exon1T/CTT
5Dessert_and_cider_core_collections_8k_SNPGDsnp00348A/GGG
6Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_1260672_Lg2_01134_MAF40_1677893_exon1RGA
7Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TG_1270705_Lg2_01134_MAF10_484985_exon2T/GTT
8Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_1272762_Lg2_01134_MAF50_617054_exon1T/CCT
9Dessert_and_cider_core_collections_8k_SNPGDsnp01134T/GAC
10Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_1278998_Lg2_01134_MAF30_MDP0000233214_exon4A/GAA
11Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_1285091_Lg2_01134_MAF50_864622_exon1A/GGA
12Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_1557630_Lg2_snpCO903605_MAF40_MDP0000631295_exon3A/GAG
13Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_1606574_Lg2_snpCO903605_MAF10_99551_exon1T/CTT
14Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_1879153_Lg2_01735_MAF30_MDP0000516949_exon1YTC
15Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_1877053_Lg2_01735_MAF40_554134_exon1T/GTT
16Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_1873474_Lg2_01735_MAF20_MDP0000289720_exon10A/CAC
17Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_1869486_Lg2_01735_MAF20_477197_exon1A/GAA
18Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_1908444_Lg2_01735_MAF50_979810_exon1A/GGG
19Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TG_1926287_Lg2_01735_MAF50_1659427_exon1T/GTG
20Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_1939660_Lg2_AAT1_MAF40_MDP0000145727_exon4A/GAG
21Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_1958621_Lg2_AAT1_MAF20_1677156_exon1T/CAA
22Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_1979331_Lg2_AAT1_MAF50_MDP0000307573_exon4A/GGG
23Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_2024247_Lg2_AAT1_MAF50_1670831_exon1A/GGA
24Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_2393544_Lg2_01565_MAF30_269285_exon2A/CAA
25Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_2397172_Lg2_01565_MAF20_538704_exon1YTT
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Cross References
External references for this accession
DatabaseAccession
GRINPI 589885
Fruit and Nut Cultivars Database11141
Phenotypic Data
Phenotypic Data
Total 229 trait scores
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# Dataset Descriptor Value
1Apple_CRS_phenotyping_2012MoldyCore_100
2Apple_CRS_phenotyping_2012MoldyCore_200
3Apple_CRS_phenotyping_2012Maturity_01.75
4Apple_CRS_phenotyping_2012Maturity_102
5Apple_CRS_phenotyping_2012Maturity_202
6Apple_CRS_phenotyping_2012Firm_02.75
7Apple_CRS_phenotyping_2012Firm_102.25
8Apple_CRS_phenotyping_2012Firm_201.25
9Apple_CRS_phenotyping_2012Crisp_02
10Apple_CRS_phenotyping_2012Crisp_101.75
11Apple_CRS_phenotyping_2012Crisp_201
12Apple_CRS_phenotyping_2012Juice_03
13Apple_CRS_phenotyping_2012Juice_101.75
14Apple_CRS_phenotyping_2012Juice_201
15Apple_CRS_phenotyping_2012Aroma_02.25
16Apple_CRS_phenotyping_2012Aroma_102
17Apple_CRS_phenotyping_2012Aroma_201.5
18Apple_CRS_phenotyping_2012Sweet_03.5
19Apple_CRS_phenotyping_2012Sweet_102
20Apple_CRS_phenotyping_2012Sweet_201.25
21Apple_CRS_phenotyping_2012Acidity_01.75
22Apple_CRS_phenotyping_2012Acidity_101
23Apple_CRS_phenotyping_2012Acidity_201
24Apple_CRS_phenotyping_2012SSC_011.45
25Apple_CRS_phenotyping_2012SSC_1010.4
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