Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.14	BACSSR34	BACSSR34	marker_locus	40.12 cM
Apple-C16xC17-F1-2012.14	BACSSR93	BACSSR93	marker_locus	43.04 cM
Apple-C16xC17-F1-2012.14	MdSNPui06700	MdSNPui06700	marker_locus	43.81 cM
Apple-C16xC17-F1-2012.14	MdSNPui08653	MdSNPui08653	marker_locus	46.77 cM
Apple-C16xC17-F1-2012.14	CH05g11	CH05g11	marker_locus	46.88 cM
Apple-C16xC17-F1-2012.14	CTG1076440	CTG1076440	marker_locus	48.19 cM
Apple-C16xC17-F1-2012.14	CN891058	CN891058	marker_locus	49.93 cM
Apple-C16xC17-F1-2012.14	MdSNPui04500	MdSNPui04500	marker_locus	52.87 cM
Apple-C16xC17-F1-2012.14	MdSNPui05497	MdSNPui05497	marker_locus	56.94 cM
Apple-C16xC17-F1-2012.14	GDsnp01900	GDsnp01900	marker_locus	56.94 cM
Apple-C16xC17-F1-2012.14	MdSNPui02835	MdSNPui02835	marker_locus	59.64 cM
Apple-C16xC17-F1-2012.14	CO898754	CO898754	marker_locus	61.77 cM
Apple-C16xC17-F1-2012.14	MdSNPui07826	MdSNPui07826	marker_locus	64.21 cM
Apple-C16xC17-F1-2012.14	MdSNPui06359	MdSNPui06359	marker_locus	64.64 cM
Apple-C16xC17-F1-2012.14	MdSNPui06441	MdSNPui06441	marker_locus	64.64 cM
Apple-C16xC17-F1-2012.14	MdSNPui11637	MdSNPui11637	marker_locus	64.97 cM
Apple-C16xC17-F1-2012.14	MdSNPui06034	MdSNPui06034	marker_locus	65.87 cM
Apple-C16xC17-F1-2012.14	CH03g06	CH03g06	marker_locus	68.18 cM
Apple-C16xC17-F1-2012.14	BACSSR45	BACSSR45	marker_locus	68.72 cM
Apple-C16xC17-F1-2012.14	CO752956	CO752956	marker_locus	69.14 cM
Apple-C16xC17-F1-2012.14	CN923417	CN923417	marker_locus	70.11 cM
Apple-C16xC17-F1-2012.14	F3H-1-SSR	F3H-1-SSR	marker_locus	73.86 cM
Apple-C16xC17-F1-2012.14	CH03a03-1	CH03a03-1	marker_locus	74.58 cM
Apple-C16xC17-F1-2012.14	CTG1073694	CTG1073694	marker_locus	74.8 cM
Apple-C16xC17-F1-2012.14	MDAJ761-SSR	MDAJ761-SSR	marker_locus	74.95 cM

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