Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.12	CTG1067366	CTG1067366	marker_locus	0 cM
Apple-C16xC17-F1-2012.12	CN904191	CN904191	marker_locus	1.91 cM
Apple-C16xC17-F1-2012.12	CTG1063707	CTG1063707	marker_locus	2.25 cM
Apple-C16xC17-F1-2012.12	CTG1059629	CTG1059629	marker_locus	5.35 cM
Apple-C16xC17-F1-2012.12	MdSNPui08089	MdSNPui08089	marker_locus	6.8 cM
Apple-C16xC17-F1-2012.12	CN851978	CN851978	marker_locus	6.84 cM
Apple-C16xC17-F1-2012.12	MdSNPui01058	MdSNPui01058	marker_locus	8.01 cM
Apple-C16xC17-F1-2012.12	MdSNPui06943	MdSNPui06943	marker_locus	9.2 cM
Apple-C16xC17-F1-2012.12	CN892773	CN892773	marker_locus	10.67 cM
Apple-C16xC17-F1-2012.12	MdSNPui08088	MdSNPui08088	marker_locus	11.16 cM
Apple-C16xC17-F1-2012.12	MdSNPui00823	MdSNPui00823	marker_locus	11.85 cM
Apple-C16xC17-F1-2012.12	CTG1065713	CTG1065713	marker_locus	14.14 cM
Apple-C16xC17-F1-2012.12	CTG1060429	CTG1060429	marker_locus	14.94 cM
Apple-C16xC17-F1-2012.12	KB08-A9	KB08-A9	marker_locus	16.06 cM
Apple-C16xC17-F1-2012.12	MdSNPui02487	MdSNPui02487	marker_locus	18.35 cM
Apple-C16xC17-F1-2012.12	CH05d11	CH05d11	marker_locus	20.51 cM
Apple-C16xC17-F1-2012.12	MdSNPui07912	MdSNPui07912	marker_locus	21.71 cM
Apple-C16xC17-F1-2012.12	MdSNPui02417	MdSNPui02417	marker_locus	21.71 cM
Apple-C16xC17-F1-2012.12	MdSNPui04570	MdSNPui04570	marker_locus	21.71 cM
Apple-C16xC17-F1-2012.12	GDsnp02857	GDsnp02857	marker_locus	22.56 cM
Apple-C16xC17-F1-2012.12	MdSNPui00983	MdSNPui00983	marker_locus	25.26 cM
Apple-C16xC17-F1-2012.12	CTG1060456	CTG1060456	marker_locus	26.61 cM
Apple-C16xC17-F1-2012.12	CH05g02	CH05g02	marker_locus	27.08 cM
Apple-C16xC17-F1-2012.12	MdSNPui04438	MdSNPui04438	marker_locus	31.98 cM
Apple-C16xC17-F1-2012.12	MdSNPui07805	MdSNPui07805	marker_locus	33.67 cM

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