Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.1	MdSNPui09392	MdSNPui09392	marker_locus	27.86 cM
Apple-C16xC17-F1-2012.1	CTG1068462-1	CTG1068462-1	marker_locus	29.46 cM
Apple-C16xC17-F1-2012.1	MdSNPui00737	MdSNPui00737	marker_locus	30.31 cM
Apple-C16xC17-F1-2012.1	MdSNPui04701	MdSNPui04701	marker_locus	31.48 cM
Apple-C16xC17-F1-2012.1	MdSNPui04700	MdSNPui04700	marker_locus	33.32 cM
Apple-C16xC17-F1-2012.1	CTG1059098	CTG1059098	marker_locus	34.17 cM
Apple-C16xC17-F1-2012.1	MdSNPui06364	MdSNPui06364	marker_locus	35.3 cM
Apple-C16xC17-F1-2012.1	MdSNPui04590	MdSNPui04590	marker_locus	36.04 cM
Apple-C16xC17-F1-2012.1	MdSNPui01149	MdSNPui01149	marker_locus	37.4 cM
Apple-C16xC17-F1-2012.1	MdSNPui05259	MdSNPui05259	marker_locus	39.99 cM
Apple-C16xC17-F1-2012.1	MdSNPui08584	MdSNPui08584	marker_locus	39.99 cM
Apple-C16xC17-F1-2012.1	MdSNPui00702	MdSNPui00702	marker_locus	39.99 cM
Apple-C16xC17-F1-2012.1	CTG1058435	CTG1058435	marker_locus	41.17 cM
Apple-C16xC17-F1-2012.1	MdSNPui04242	MdSNPui04242	marker_locus	41.62 cM
Apple-C16xC17-F1-2012.1	MdSNPui04630	MdSNPui04630	marker_locus	41.62 cM
Apple-C16xC17-F1-2012.1	MdSNPui04241	MdSNPui04241	marker_locus	41.62 cM
Apple-C16xC17-F1-2012.1	MdSNPui11986	MdSNPui11986	marker_locus	41.98 cM
Apple-C16xC17-F1-2012.1	MdSNPui11802	MdSNPui11802	marker_locus	43.01 cM
Apple-C16xC17-F1-2012.1	MdSNPui05817	MdSNPui05817	marker_locus	43.95 cM
Apple-C16xC17-F1-2012.1	MdSNPui03974	MdSNPui03974	marker_locus	43.95 cM
Apple-C16xC17-F1-2012.1	CTG1060666	CTG1060666	marker_locus	45.67 cM
Apple-C16xC17-F1-2012.1	MdSNPui06416	MdSNPui06416	marker_locus	45.75 cM
Apple-C16xC17-F1-2012.1	MdSNPui03159	MdSNPui03159	marker_locus	46.69 cM
Apple-C16xC17-F1-2012.1	MdSNPui08039	MdSNPui08039	marker_locus	46.93 cM
Apple-C16xC17-F1-2012.1	MdSNPui12064	MdSNPui12064	marker_locus	47.22 cM

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