Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.12	GDsnp02152	GDsnp02152	marker_locus	67.28 cM
Apple-C16xC17-F1-2012.12	GDsnp00915	GDsnp00915	marker_locus	67.3 cM
Apple-C16xC17-F1-2012.12	GDsnp00068	GDsnp00068	marker_locus	67.3 cM
Apple-C16xC17-F1-2012.12	BACSSR13	BACSSR13	marker_locus	71.63 cM
Apple-C16xC17-F1-2012.12	CO754587	CO754587	marker_locus	71.93 cM
Apple-C16xC17-F1-2012.12	MdSNPui01007	MdSNPui01007	marker_locus	71.95 cM
Apple-C16xC17-F1-2012.12	CTG1066897	CTG1066897	marker_locus	77.34 cM
Apple-C16xC17-F1-2012.12	CTG1064471	CTG1064471	marker_locus	77.68 cM
Apple-C16xC17-F1-2012.13	MdSNPui09107	MdSNPui09107	marker_locus	0 cM
Apple-C16xC17-F1-2012.13	GDsnp02063	GDsnp02063	marker_locus	1.15 cM
Apple-C16xC17-F1-2012.13	MdSNPui05098	MdSNPui05098	marker_locus	5.49 cM
Apple-C16xC17-F1-2012.13	MdSNPui11118	MdSNPui11118	marker_locus	6.59 cM
Apple-C16xC17-F1-2012.13	MdSNPui10305	MdSNPui10305	marker_locus	25.21 cM
Apple-C16xC17-F1-2012.13	MdSNPui10566	MdSNPui10566	marker_locus	25.21 cM
Apple-C16xC17-F1-2012.13	MdSNPui07263	MdSNPui07263	marker_locus	26.05 cM
Apple-C16xC17-F1-2012.13	Hi03e04	Hi03e04	marker_locus	26.81 cM
Apple-C16xC17-F1-2012.13	MdSNPui07948	MdSNPui07948	marker_locus	30.75 cM
Apple-C16xC17-F1-2012.13	MdSNPui02890	MdSNPui02890	marker_locus	31.9 cM
Apple-C16xC17-F1-2012.13	CTG1076025	CTG1076025	marker_locus	34.95 cM
Apple-C16xC17-F1-2012.13	NH009b	NH009b	marker_locus	36.27 cM
Apple-C16xC17-F1-2012.13	CN863811	CN863811	marker_locus	36.84 cM
Apple-C16xC17-F1-2012.13	CTG1058844	CTG1058844	marker_locus	36.91 cM
Apple-C16xC17-F1-2012.13	BACSSR83	BACSSR83	marker_locus	37.16 cM
Apple-C16xC17-F1-2012.13	CTG1058846	CTG1058846	marker_locus	38.11 cM
Apple-C16xC17-F1-2012.13	CN444195	CN444195	marker_locus	38.11 cM

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