Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.10	MdSNPui04078	MdSNPui04078	marker_locus	12.48 cM
Apple-C16xC17-F1-2012.10	MdSNPui11948	MdSNPui11948	marker_locus	12.91 cM
Apple-C16xC17-F1-2012.10	MdSNPui04870	MdSNPui04870	marker_locus	12.91 cM
Apple-C16xC17-F1-2012.10	MdSNPui11945	MdSNPui11945	marker_locus	12.91 cM
Apple-C16xC17-F1-2012.10	MdSNPui11946	MdSNPui11946	marker_locus	12.91 cM
Apple-C16xC17-F1-2012.10	MdSNPui11941	MdSNPui11941	marker_locus	12.91 cM
Apple-C16xC17-F1-2012.10	MdSNPui11944	MdSNPui11944	marker_locus	12.91 cM
Apple-C16xC17-F1-2012.10	MdSNPui01195	MdSNPui01195	marker_locus	13.5 cM
Apple-C16xC17-F1-2012.10	MdSNPui10122	MdSNPui10122	marker_locus	14.98 cM
Apple-C16xC17-F1-2012.10	MdSNPui11529	MdSNPui11529	marker_locus	15.13 cM
Apple-C16xC17-F1-2012.10	MdSNPui11899	MdSNPui11899	marker_locus	15.13 cM
Apple-C16xC17-F1-2012.10	AT000347	AT000347	marker_locus	18.72 cM
Apple-C16xC17-F1-2012.10	GD100	GD100	marker_locus	22.35 cM
Apple-C16xC17-F1-2012.10	MdSNPui10216	MdSNPui10216	marker_locus	23.55 cM
Apple-C16xC17-F1-2012.10	MdSNPui02866	MdSNPui02866	marker_locus	29.27 cM
Apple-C16xC17-F1-2012.10	GDsnp00307	GDsnp00307	marker_locus	31.22 cM
Apple-C16xC17-F1-2012.10	MdSNPui10875	MdSNPui10875	marker_locus	32.52 cM
Apple-C16xC17-F1-2012.10	MdSNPui10878	MdSNPui10878	marker_locus	32.52 cM
Apple-C16xC17-F1-2012.10	MdSNPui10876	MdSNPui10876	marker_locus	32.52 cM
Apple-C16xC17-F1-2012.10	MdSNPui10877	MdSNPui10877	marker_locus	32.52 cM
Apple-C16xC17-F1-2012.10	CN857316	CN857316	marker_locus	38.9 cM
Apple-C16xC17-F1-2012.10	MdSNPui11693	MdSNPui11693	marker_locus	45.3 cM
Apple-C16xC17-F1-2012.10	CTG1066581	CTG1066581	marker_locus	46.1 cM
Apple-C16xC17-F1-2012.10	BACSSR18	BACSSR18	marker_locus	46.96 cM
Apple-C16xC17-F1-2012.10	MdSNPui09328	MdSNPui09328	marker_locus	49.14 cM

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