Pear-PM-F1-PEAR3

Map Overview

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NamePear-PM-F1-PEAR3
SpeciesPyrus x bretschneideri
Pyrus communis
SoftwareJoinMap 4.0
Map typegenetic
Population typeF1
Map unitcM
Maternal parentPEAR3
Paternal parentMoonglow
Population size98
Number of loci204
Number of QTL4
Number of linkage groups17
Publication[view all]
ContactDavid Chagné
Stock
NameTypeDetails
PEAR3_x_Moonglowaccession
Alias:T003xM
Population size:98
Accession type:breeding_research_material
Contact
NameDetails
David Chagné
First name:David
Last name:Chagné
Institution:The Horticulture and Food Research Institute of New Zealand (HortResearch) Palmerston North
Address:PB 11030, Manawatu Mail Centre, Palmerston North 4442, New Zealand
Country:New Zealand
Email:DChagne@hortresearch.co.nz
Map Loci
This map contains 204 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Pear-PM-F1-PEAR3.13Pear_Bartlett_SNP_CT_202_4045872Pear_Bartlett_SNP_CT_202_4045872marker_locus4.78 cM
Pear-PM-F1-PEAR3.13RosBREEDSNP_SNP_TC_5365087_Lg16_00030_MAF40_1630198_exon1RosBREED_SNP_TC_5365087_Lg16_00030_MAF40_1630198_exon1marker_locus14.25 cM
Pear-PM-F1-PEAR3.13RosBREEDSNP_SNP_TC_19307229_Lg12_01357_MAF50_MDP0000159673_exon2RosBREED_SNP_TC_19307229_Lg12_01357_MAF50_MDP0000159673_exon2marker_locus19.19 cM
Pear-PM-F1-PEAR3.13GDsnp01316GDsnp01316marker_locus49.37 cM
Pear-PM-F1-PEAR3.14TsuENH058TsuENH058marker_locus0 cM
Pear-PM-F1-PEAR3.14RosBREEDSNP_SNP_GT_706809_Lg14_01902_MAF20_MDP0000136426_exon3RosBREED_SNP_GT_706809_Lg14_01902_MAF20_MDP0000136426_exon3marker_locus0.6 cM
Pear-PM-F1-PEAR3.14RosBREEDSNP_SNP_GT_6130026_Lg14_02706_MAF30_1663732_exon1RosBREED_SNP_GT_6130026_Lg14_02706_MAF30_1663732_exon1marker_locus5.36 cM
Pear-PM-F1-PEAR3.14RosBREEDSNP_SNP_GA_649841_Lg13_01579_MAF50_415180_exon3RosBREED_SNP_GA_649841_Lg13_01579_MAF50_415180_exon3marker_locus16.47 cM
Pear-PM-F1-PEAR3.14RosBREEDSNP_SNP_AG_17041443_Lg9_01648_MAF30_MDP0000272132_exon3RosBREED_SNP_AG_17041443_Lg9_01648_MAF30_MDP0000272132_exon3marker_locus18.99 cM
Pear-PM-F1-PEAR3.14RosBREEDSNP_SNP_CT_18416836_Lg14_02426_MAF30_1671446_exon2RosBREED_SNP_CT_18416836_Lg14_02426_MAF30_1671446_exon2marker_locus21.93 cM
Pear-PM-F1-PEAR3.14RosBREEDSNP_SNP_CA_27837163_Lg5_01859_MAF20_MDP0000259320_exon1RosBREED_SNP_CA_27837163_Lg5_01859_MAF20_MDP0000259320_exon1marker_locus24.28 cM
Pear-PM-F1-PEAR3.14GDsnp00023GDsnp00023marker_locus49.03 cM
Pear-PM-F1-PEAR3.14RosBREEDSNP_SNP_AG_30481224_Lg14_RosCOS2457_MAF30_122969_exon1RosBREED_SNP_AG_30481224_Lg14_RosCOS2457_MAF30_122969_exon1marker_locus54.62 cM
Pear-PM-F1-PEAR3.14CH03g06CH03g06marker_locus55.72 cM
Pear-PM-F1-PEAR3.14GDsnp00171GDsnp00171marker_locus55.79 cM
Pear-PM-F1-PEAR3.14RosBREEDSNP_SNP_GA_29623528_Lg14_00171_MAF20_521140_exon5RosBREED_SNP_GA_29623528_Lg14_00171_MAF20_521140_exon5marker_locus55.88 cM
Pear-PM-F1-PEAR3.15NH027aNH027amarker_locus0 cM
Pear-PM-F1-PEAR3.15Pear_Bartlett_SNP_TC_937_5130140Pear_Bartlett_SNP_TC_937_5130140marker_locus5.13 cM
Pear-PM-F1-PEAR3.15RosBREEDSNP_SNP_TC_1451208_Lg15_MDP0000227096_MAF50_MDP0000227096_exon6RosBREED_SNP_TC_1451208_Lg15_MDP0000227096_MAF50_MDP0000227096_exon6marker_locus5.13 cM
Pear-PM-F1-PEAR3.15RosBREEDSNP_SNP_CT_3046222_Lg15_01814_MAF20_480291_exon1RosBREED_SNP_CT_3046222_Lg15_01814_MAF20_480291_exon1marker_locus6.53 cM
Pear-PM-F1-PEAR3.15RosBREEDSNP_SNP_CT_4924401_Lg15_RosCOS2117_MAF50_MDP0000163464_exon2RosBREED_SNP_CT_4924401_Lg15_RosCOS2117_MAF50_MDP0000163464_exon2marker_locus10.16 cM
Pear-PM-F1-PEAR3.15RosBREEDSNP_SNP_GA_8129810_Lg15_00389_MAF40_1641199_exon1RosBREED_SNP_GA_8129810_Lg15_00389_MAF40_1641199_exon1marker_locus16.28 cM
Pear-PM-F1-PEAR3.15RosBREEDSNP_SNP_CT_1606574_Lg2_snpCO903605_MAF10_99551_exon1RosBREED_SNP_CT_1606574_Lg2_snpCO903605_MAF10_99551_exon1marker_locus16.6 cM
Pear-PM-F1-PEAR3.15Pear_Bartlett_SNP_CT_253_5133249Pear_Bartlett_SNP_CT_253_5133249marker_locus22.5 cM
Pear-PM-F1-PEAR3.15NB129aNB129amarker_locus30.12 cM
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Map QTL
This map contains 4 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Pear-PM-F1-PEAR3.5qRCP.PM-ch5QTL44 cM46 cM45 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.1QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.2QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.3QTL0 cM30 cM16 cM
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