Pear-PM-F1-PEAR3

Map Overview

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NamePear-PM-F1-PEAR3
SpeciesPyrus x bretschneideri
Pyrus communis
SoftwareJoinMap 4.0
Map typegenetic
Population typeF1
Map unitcM
Maternal parentPEAR3
Paternal parentMoonglow
Population size98
Number of loci204
Number of QTL4
Number of linkage groups17
Publication[view all]
ContactDavid Chagné
Stock
NameTypeDetails
PEAR3_x_Moonglowaccession
Alias:T003xM
Population size:98
Accession type:breeding_research_material
Contact
NameDetails
David Chagné
First name:David
Last name:Chagné
Institution:The Horticulture and Food Research Institute of New Zealand (HortResearch) Palmerston North
Address:PB 11030, Manawatu Mail Centre, Palmerston North 4442, New Zealand
Country:New Zealand
Email:DChagne@hortresearch.co.nz
Map Loci
This map contains 204 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Pear-PM-F1-PEAR3.3RosBREEDSNP_SNP_GA_6539382_Lg3_01921_MAF30_1666387_exon1RosBREED_SNP_GA_6539382_Lg3_01921_MAF30_1666387_exon1marker_locus4.28 cM
Pear-PM-F1-PEAR3.3RosBREEDSNP_SNP_AG_9121744_Lg3_RosCOS449_MAF10_491206_exon2RosBREED_SNP_AG_9121744_Lg3_RosCOS449_MAF10_491206_exon2marker_locus7.04 cM
Pear-PM-F1-PEAR3.3CH02d08CH02d08marker_locus8.6 cM
Pear-PM-F1-PEAR3.3RosBREEDSNP_SNP_GA_14445035_Lg3_01124_MAF50_530134_exon1RosBREED_SNP_GA_14445035_Lg3_01124_MAF50_530134_exon1marker_locus16.54 cM
Pear-PM-F1-PEAR3.3GDsnp01124GDsnp01124marker_locus16.54 cM
Pear-PM-F1-PEAR3.3RosBREEDSNP_SNP_GT_1707020_Lg11_02626_MAF30_MDP0000285338_exon2RosBREED_SNP_GT_1707020_Lg11_02626_MAF30_MDP0000285338_exon2marker_locus35.65 cM
Pear-PM-F1-PEAR3.3Pear_Bartlett_SNP_GA_309_5092259Pear_Bartlett_SNP_GA_309_5092259marker_locus35.65 cM
Pear-PM-F1-PEAR3.3RosBREEDSNP_SNP_GA_5748318_Lg15_01185_MAF40_518704_exon1RosBREED_SNP_GA_5748318_Lg15_01185_MAF40_518704_exon1marker_locus37.53 cM
Pear-PM-F1-PEAR3.3Pear_Bartlett_SNP_GA_371_5056574Pear_Bartlett_SNP_GA_371_5056574marker_locus44.06 cM
Pear-PM-F1-PEAR3.3RosBREEDSNP_SNP_GA_34442034_Lg3_02030_MAF40_MDP0000149890_exon2RosBREED_SNP_GA_34442034_Lg3_02030_MAF40_MDP0000149890_exon2marker_locus50.11 cM
Pear-PM-F1-PEAR3.4RosBREEDSNP_SNP_CT_24109006_Lg4_00232_MAF40_218914_exon1RosBREED_SNP_CT_24109006_Lg4_00232_MAF40_218914_exon1marker_locus0 cM
Pear-PM-F1-PEAR3.4RosBREEDSNP_SNP_GA_23902093_Lg4_00681_MAF40_1663052_exon1RosBREED_SNP_GA_23902093_Lg4_00681_MAF40_1663052_exon1marker_locus0.94 cM
Pear-PM-F1-PEAR3.4RosBREEDSNP_SNP_GA_18544856_Lg4_02277_MAF40_790526_exon1RosBREED_SNP_GA_18544856_Lg4_02277_MAF40_790526_exon1marker_locus7.32 cM
Pear-PM-F1-PEAR3.4RosBREEDSNP_SNP_AG_21538144_Lg3_261364_MAF30_261364_exon1RosBREED_SNP_AG_21538144_Lg3_261364_MAF30_261364_exon1marker_locus8.27 cM
Pear-PM-F1-PEAR3.4Pear_Bartlett_SNP_TC_351_5052000Pear_Bartlett_SNP_TC_351_5052000marker_locus10.5 cM
Pear-PM-F1-PEAR3.4TsuENH004TsuENH004marker_locus11.24 cM
Pear-PM-F1-PEAR3.4RosBREEDSNP_SNP_TC_16628559_Lg1_02538_MAF40_MDP0000495165_exon1RosBREED_SNP_TC_16628559_Lg1_02538_MAF40_MDP0000495165_exon1marker_locus15.23 cM
Pear-PM-F1-PEAR3.4RosBREEDSNP_SNP_CT_8716037_Lg4_02646_MAF20_476635_exon2RosBREED_SNP_CT_8716037_Lg4_02646_MAF20_476635_exon2marker_locus26.93 cM
Pear-PM-F1-PEAR3.4RosBREEDSNP_SNP_GA_5884301_Lg4_02263_MAF50_749161_exon1RosBREED_SNP_GA_5884301_Lg4_02263_MAF50_749161_exon1marker_locus34.67 cM
Pear-PM-F1-PEAR3.4RosBREEDSNP_SNP_CT_24064868_Lg14_01531_MAF20_MDP0000199415_exon1RosBREED_SNP_CT_24064868_Lg14_01531_MAF20_MDP0000199415_exon1marker_locus37.03 cM
Pear-PM-F1-PEAR3.4Pear_Bartlett_SNP_GA_153_5149207Pear_Bartlett_SNP_GA_153_5149207marker_locus43.1 cM
Pear-PM-F1-PEAR3.5RosBREEDSNP_SNP_GA_993478_Lg5_01694_MAF50_470798_exon2RosBREED_SNP_GA_993478_Lg5_01694_MAF50_470798_exon2marker_locus0 cM
Pear-PM-F1-PEAR3.5GDsnp00264GDsnp00264marker_locus5.95 cM
Pear-PM-F1-PEAR3.5CH03a09CH03a09marker_locus9.88 cM
Pear-PM-F1-PEAR3.5Pear_Bartlett_SNP_CA_255_5066108Pear_Bartlett_SNP_CA_255_5066108marker_locus10.33 cM
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Map QTL
This map contains 4 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Pear-PM-F1-PEAR3.5qRCP.PM-ch5QTL44 cM46 cM45 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.1QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.2QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.3QTL0 cM30 cM16 cM
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