Access genome data in JBrowse and genome page

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Genome names in bold have been migrated to JBrowse2.  You can access those genomes by clicking the JBrowse link next to the name.  Or you can start a blank JBrowse2 session.

We are currently working on updating the JBrowse2 user documentation, but here are some resources to get you started: PDF document | Video

Fragaria

  1. Fragaria chiloensis KIB CAS Genome v1.0:  JBrowse | Genome page
  2. Fragaria chiloensis v1.0: JBrowse | Genome page
  3. Fragaria daltoniana YNU Genome v1.0 : JBrowse | Genome page
  4. Fragaria iinumae KIB CAS Genome v1.0 : JBrowse | Genome page
  5. Fragaria iinumae Genome v1.0 : JBrowse | Genome page
  6. Fragaria iinumae  (FII_r1.1): JBrowse | Genome page
  7. Fragaria mandschurica YNU Genome v1.0 : JBrowse | Genome page
  8. Fragaria moupinensis haplotype Genome v1.0: JBrowse | Genome page
  9. Fragaria nilgerrensis YNU Genome v1.0 : JBrowse | Genome page
  10. Fragaria nilgerrensis SCBG Genome v1.0: JBrowse | Genome page
  11. Fragaria nilgerrensis Genome v1.0: JBrowse | Genome page
  12. Fragaria nipponica KIB CAS Genome v1.0: JBrowse | Genome page
  13. Fragaria nipponica  (FNI_r1.1): JBrowse | Genome page
  14. Fragaria nubicola  (FNU_r1.1): JBrowse | Genome page
  15. Fragaria nubicola SCBG Genome v1.0: JBrowse | Genome page
  16. Fragaria orientalis  (FOR_r1.1): JBrowse | Genome page
  17. Fragaria pentaphylla YNU Genome v1.0 : JBrowse | Genome page
  18. Fragaria viridis YNU Genome v1.0 : JBrowse | Genome page
  19. Fragaria viridis SCBG Genome v1.0: JBrowse | Genome page
  20. Fragaria virginiana KIB CAS Genome  v1.0: JBrowse | Genome page
  21. Fragaria vesca CFRA 2339 Genome v1.0: JBrowse | Genome page
  22. Fragaria vesca Yellow Wonder Genome v1.0: JBrowse | Genome page
  23. Fragaria vesca ‘Hawaii 4’ NAU Genome v1.0: JBrowse | Genome page
  24. Fragaria vesca Genome v4.0JBrowse | Genome page
  25. Fragaria vesca Genome v2.0: JBrowse | Genome page
  26. Fragaria vesca Genome v1.1: JBrowse | Genome page (v1.1.a1 | v1.1.a2)
  27. Fragaria vesca Genome v1.0 scaffolds: JBrowse | Genome page
  28. Fragaria vesca Genome v1.0 pseudomolecules: JBrowse | Genome page
  29. Fragaria x ananassa Benihoppe Genome v1.0JBrowse | Genome page
  30. Fragaria x ananassa Camarosa Genome v1.0JBrowse | Genome page
  31. Fragaria x ananassa FL15.89-25 Genome v1.0JBrowse | Genome page
  32. Fragaria x ananassa FL17.68-110 Genome v1.0:  JBrowse | Genome page
  33. Fragaria x ananassa FL20.82-27 Genome v1.0: JBrowse | Genome page
  34. Fragaria x ananassa Florida Brilliance'Genome v1.0: JBrowse | Genome page
  35. Fragaria x ananassa Royal Royce Genome v1.0JBrowse | Genome page
  36. Fragaria x ananassa Yanli Genome v1.0JBrowse | Genome page
  37. Fragaria x ananassa  (FAN_r1.1): JBrowse | Genome page
  38. Fragaria x ananassa  (FANhybrid_r1.2): JBrowse | Genome page

Malus

  1. Malus angustifolia Genome v1.0: JBrowse | Genome page
  2. Malus baccata v1.0: JBrowse | Genome page
  3. Malus coronaria v1.0: JBrowse | Genome page
  4. Malus fusca v1.1 : JBrowse | Genome page
  5. Malus ioensis v1.0: JBrowse | Genome page
  6. Malus prunifolia Fupingqiuzi v1.0 genome: JBrowse | Genome page 
  7. Malus sieversii haploid v1.0 genome: JBrowse | Genome page
  8. Malus sieversii diploid v1.0 genome: JBrowse | Genome page
  9. Malus sylvestris haploid v1.0 genome: JBrowse | Genome page
  10. Malus sylvestris diploid v1.0 genome: JBrowse | Genome page
  11. Malus x domestica Antonovka 172670-B: JBrowse | Genome page
  12. Malus x domestica 'Fuji' v1.0.a2: JBrowse | Genome page
  13. Malus x domestica Gala haploid v1.0 genome: JBrowse | Genome page
  14. Malus x domestica Gala diploid v1.0 genome: JBrowse | Genome page
  15. Malus x domestica 'Hanfu' v1.0: JBrowse | Genome page
  16. Malus x domestica HFTH1 v1.0: JBrowse | Genome page
  17. Malus x domestica Honeycrisp v1.1: JBrowse | Genome page
  18. Malus x domestica 'M9' v1.0.a2: JBrowse Genome page
  19. Malus x domestica 'MM106' v1.0.a2: JBrowse | Genome page
  20. Malus x domestica Golden Delicious FEM v1.0: JBrowse | Genome page
  21. Malus x domestica Golden Delicious GDT2T v1.0: JBrowse | Genome page
  22. Malus x domestica Genome (GDDH13 v1.1): JBrowse | Genome page
  23. Malus x domestica Golden Delicious Genome NCBI annotation: JBrowse | Genome page
  24. Malus x domestica WA 38: JBrowse | Genome page
  25. Malus x domestica v1.0 NCBI annotation: JBrowse | Genome page
  26. Malus x domestica v3.0.a1 pseudomolecules: JBrowse | Genome page
  27. Malus x domestica v3.0.a1 contigs: JBrowse | Genome page
  28. Malus x domestica v1.0 pseudomolecules: JBrowse | Genome page
  29. Malus x domestica v1.0: JBrowse | Genome page
  30. Malus x domestica v1.0 primary: JBrowse | Genome page

Prunus (and Cerasus)

Pyrus

  1. Pyrus betulifolia Genome v1.0: JBrowse | Genome page
  2. Pyrus bretschneideri v1.1 genome: JBrowse | Genome page
  3. Pyrus communis d'Anjou Genome v2.3.a1: JBrowse | Genome page
  4. Pyrus communis d'Anjou draft  Genome v1.0: JBrowse | Genome page
  5. Pyrus communis Bartlett DH Genome v2.0: JBrowse | Genome page
  6. Pyrus communis v1.0 draft genome: JBrowse | Genome page
  7. Pyrus pyrifolia Cuiguan Genome v1.0: JBrowse | Genome page
  8. Pyrus pyrifolia Genome v1.0: JBrowse | Genome page
  9. Pyrus ussuriensis x communis Genome v1.0: JBrowse | Genome page

Rosa

  1. Rosa chinensis Genome v1.0: JBrowse | Genome page
  2. Rosa chinensis Illumina Genome v1.0: JBrowse | Genome page
  3. Rosa chinensis Homozygous Genome v2.0: JBrowse | Genome page
  4. Rosa multiflora Genome v1.0: JBrowse | Genome page
  5. Rosa rugosa Genome v1.0: JBrowse | Genome page
  6. Rosa wichuraiana Basye's Thornless Genome v1.0: JBrowse | Genome page

Rubus

Potentilla (or Argentina)

 

  1. Potentilla anserina v1.0: JBrowse | Genome page
  2. Potentilla micrantha v1.0: JBrowse | Genome page
  3. Argentina anserina v1.0: JBrowse | Genome page
  4. Argentina lineata v1.0: JBrowse | Genome page

Others

  1. Crataegus pinnatifida var. major Genome v1.0: JBrowse | Genome page
  2. Eriobotrya japonica Genome v1.0: JBrowse | Genome page
  3. Gillenia trifoliata Genome v1.0: JBrowse | Genome page