JBrowse
Try JBrowse2 and give us feedback!
Genome names in bold have been migrated to JBrowse2. You can access those genomes by clicking the JBrowse link next to the name. Or you can start a blank JBrowse2 session.
We are currently working on updating the JBrowse2 user documentation, but here are some resources to get you started: PDF document | Video
Fragaria
- Fragaria chiloensis KIB CAS Genome v1.0: JBrowse | Genome page
- Fragaria chiloensis v1.0: JBrowse | Genome page
- Fragaria daltoniana YNU Genome v1.0 : JBrowse | Genome page
- Fragaria iinumae KIB CAS Genome v1.0 : JBrowse | Genome page
- Fragaria iinumae Genome v1.0 : JBrowse | Genome page
- Fragaria iinumae (FII_r1.1): JBrowse | Genome page
- Fragaria mandschurica YNU Genome v1.0 : JBrowse | Genome page
- Fragaria moupinensis haplotype Genome v1.0: JBrowse | Genome page
- Fragaria nilgerrensis YNU Genome v1.0 : JBrowse | Genome page
- Fragaria nilgerrensis SCBG Genome v1.0: JBrowse | Genome page
- Fragaria nilgerrensis Genome v1.0: JBrowse | Genome page
- Fragaria nipponica KIB CAS Genome v1.0: JBrowse | Genome page
- Fragaria nipponica (FNI_r1.1): JBrowse | Genome page
- Fragaria nubicola (FNU_r1.1): JBrowse | Genome page
- Fragaria nubicola SCBG Genome v1.0: JBrowse | Genome page
- Fragaria orientalis (FOR_r1.1): JBrowse | Genome page
- Fragaria pentaphylla YNU Genome v1.0 : JBrowse | Genome page
- Fragaria viridis YNU Genome v1.0 : JBrowse | Genome page
- Fragaria viridis SCBG Genome v1.0: JBrowse | Genome page
- Fragaria virginiana KIB CAS Genome v1.0: JBrowse | Genome page
- Fragaria vesca CFRA 2339 Genome v1.0: JBrowse | Genome page
- Fragaria vesca Yellow Wonder Genome v1.0: JBrowse | Genome page
- Fragaria vesca ‘Hawaii 4’ NAU Genome v1.0: JBrowse | Genome page
- Fragaria vesca Genome v4.0: JBrowse | Genome page
- Fragaria vesca Genome v2.0: JBrowse | Genome page
- Fragaria vesca Genome v1.1: JBrowse | Genome page (v1.1.a1 | v1.1.a2)
- Fragaria vesca Genome v1.0 scaffolds: JBrowse | Genome page
- Fragaria vesca Genome v1.0 pseudomolecules: JBrowse | Genome page
- Fragaria x ananassa Benihoppe Genome v1.0: JBrowse | Genome page
- Fragaria x ananassa Camarosa Genome v1.0: JBrowse | Genome page
- Fragaria x ananassa FL15.89-25 Genome v1.0: JBrowse | Genome page
- Fragaria x ananassa FL17.68-110 Genome v1.0: JBrowse | Genome page
- Fragaria x ananassa FL20.82-27 Genome v1.0: JBrowse | Genome page
- Fragaria x ananassa Florida Brilliance'Genome v1.0: JBrowse | Genome page
- Fragaria x ananassa Royal Royce Genome v1.0: JBrowse | Genome page
- Fragaria x ananassa Yanli Genome v1.0: JBrowse | Genome page
- Fragaria x ananassa (FAN_r1.1): JBrowse | Genome page
- Fragaria x ananassa (FANhybrid_r1.2): JBrowse | Genome page
Malus
- Malus angustifolia Genome v1.0: JBrowse | Genome page
- Malus baccata v1.0: JBrowse | Genome page
- Malus coronaria v1.0: JBrowse | Genome page
- Malus fusca v1.1 : JBrowse | Genome page
- Malus ioensis v1.0: JBrowse | Genome page
- Malus prunifolia Fupingqiuzi v1.0 genome: JBrowse | Genome page
- Malus sieversii haploid v1.0 genome: JBrowse | Genome page
- Malus sieversii diploid v1.0 genome: JBrowse | Genome page
- Malus sylvestris haploid v1.0 genome: JBrowse | Genome page
- Malus sylvestris diploid v1.0 genome: JBrowse | Genome page
- Malus x domestica Antonovka 172670-B: JBrowse | Genome page
- Malus x domestica 'Fuji' v1.0.a2: JBrowse | Genome page
- Malus x domestica Gala haploid v1.0 genome: JBrowse | Genome page
- Malus x domestica Gala diploid v1.0 genome: JBrowse | Genome page
- Malus x domestica 'Hanfu' v1.0: JBrowse | Genome page
- Malus x domestica HFTH1 v1.0: JBrowse | Genome page
- Malus x domestica Honeycrisp v1.1: JBrowse | Genome page
- Malus x domestica 'M9' v1.0.a2: JBrowse | Genome page
- Malus x domestica 'MM106' v1.0.a2: JBrowse | Genome page
- Malus x domestica Golden Delicious FEM v1.0: JBrowse | Genome page
- Malus x domestica Golden Delicious GDT2T v1.0: JBrowse | Genome page
- Malus x domestica Genome (GDDH13 v1.1): JBrowse | Genome page
- Malus x domestica Golden Delicious Genome NCBI annotation: JBrowse | Genome page
- Malus x domestica WA 38: JBrowse | Genome page
- Malus x domestica v1.0 NCBI annotation: JBrowse | Genome page
- Malus x domestica v3.0.a1 pseudomolecules: JBrowse | Genome page
- Malus x domestica v3.0.a1 contigs: JBrowse | Genome page
- Malus x domestica v1.0 pseudomolecules: JBrowse | Genome page
- Malus x domestica v1.0: JBrowse | Genome page
- Malus x domestica v1.0 primary: JBrowse | Genome page
Prunus (and Cerasus)
- Almond
- Prunus dulcis Nonpareil Genome v1.0: JBrowse | Genome page
- Prunus dulcis Lauranne Genome v1.0: JBrowse | Genome page
- Prunus dulcis Texas Genome v3.0: JBrowse | Genome page
- Prunus dulcis Texas Genome v2.0: JBrowse | Genome page
- Apricot
- Prunus zhengheensis Genome v1.0: JBrowse | Genome page
- Prunus armeniaca Marouch n14 v1.0: JBrowse | Genome page
- Prunus armeniaca Stella v1.0: JBrowse | Genome page
- Prunus armeniaca Sungold v1.0: JBrowse | Genome page
- Prunus armeniaca Longwangmao v1.0: JBrowse | Genome page
- Prunus armeniaca Yinxiangbai v1.0: JBrowse | Genome page
- Prunus armeniaca Genome v1.0: JBrowse | Genome page
- Prunus mandshurica CH264_4 v1.0: JBrowse | Genome page
- Prunus sibirica CH320_5 v1.0: JBrowse | Genome page
- Prunus sibirica F106 v1.0: JBrowse | Genome page
- Flowering cherry
- Cerasus x kanzakura cv. 'Kawazu-zakura' v1.0: JBrowse | Genome page
- Cerasus x kanzakura cv. 'Atami-zakura' v1.0: JBrowse | Genome page
- Cerasus x yedoensis Somei-Yoshino Genome v1.0 : JBrowse | Genome page
- Prunus campanulata Genome v1.0: JBrowse | Genome page
- Prunus yedoensis Genome v1.0: JBrowse | Genome page
- Peach
- Prunus persica 124 Pan Genome v1.0: JBrowse | Genome page
- Prunus persica Zhongyoutao 14 Genome v1.0: JBrowse | Genome page
- Prunus persica Chinese Cling Genome v1.0: JBrowse | Genome page
- Prunus persica Genome v2.0.a1: JBrowse | Genome page
- Prunus persica Genome v1.0: JBrowse | Genome page
- Prunus davidiana ZXST Haplotype Genomne v1.0: JBrowse | Genome page
- Prunus davidiana Genomne v2.0: JBrowse | Genome page
- Prunus davidiana Genomne v1.0: JBrowse | Genome page
- Prunus ferganensis Genome v2.0: JBrowse | Genome page
- Prunus ferganensis Genome v1.0: JBrowse | Genome page
- Prunus kansuensis Genome v2.0: JBrowse | Genome page
- Prunus kansuensis Genome v1.0: JBrowse | Genome page
- Prunus mira Genome v2.0: JBrowse | Genome page
- Prunus mira Genome v1.0: JBrowse | Genome page
- Plum
- Prunus domestica Draft Genome v1.0.a1: JBrowse | Genome page
- Prunus mume Nanko Genome v1.0: JBrowse | Genome page
- Prunus mume Tortuosa Genome v1.0: JBrowse | Genome page
- Prunus salicina Sanyueli FAAS Genome v1.0: JBrowse | Genome page
- Prunus salicina Sanyueli Genome v2.0: JBrowse | Genome page
- Prunus salicina Zhongli No. 6 Genome v1.0: JBrowse | Genome page
- Sweet cherry
- Prunus avium Regina Genome v1.0: JBrowse | Genome page
- Prunus avium Tieton Genome v2.0: JBrowse | Genome page
- Prunus avium Tieton Genome v1.0.a1: JBrowse | Genome page
- Prunus avium Genome v1.0.a1: JBrowse | Genome page
- Tart cherry
- Prunus cerasus cv. 'Montmorency' v1.0.a2: JBrowse | Genome page
- Prunus cerasus cv. 'Montmorency' v1.0: JBrowse | Genome page
- Others
- Prunus fruticosa 27e12(2) v1.0: JBrowse | Genome page
- Prunus humilus Genome v1.0.a1: JBrowse | Genome page
- Prunus mongolica v1.0: JBrowse | Genome page
Pyrus
- Pyrus betulifolia Genome v1.0: JBrowse | Genome page
- Pyrus bretschneideri v1.1 genome: JBrowse | Genome page
- Pyrus communis d'Anjou Genome v2.3.a1: JBrowse | Genome page
- Pyrus communis d'Anjou draft Genome v1.0: JBrowse | Genome page
- Pyrus communis Bartlett DH Genome v2.0: JBrowse | Genome page
- Pyrus communis v1.0 draft genome: JBrowse | Genome page
- Pyrus pyrifolia Cuiguan Genome v1.0: JBrowse | Genome page
- Pyrus pyrifolia Genome v1.0: JBrowse | Genome page
- Pyrus ussuriensis x communis Genome v1.0: JBrowse | Genome page
Rosa
- Rosa chinensis Genome v1.0: JBrowse | Genome page
- Rosa chinensis Illumina Genome v1.0: JBrowse | Genome page
- Rosa chinensis Homozygous Genome v2.0: JBrowse | Genome page
- Rosa multiflora Genome v1.0: JBrowse | Genome page
- Rosa rugosa Genome v1.0: JBrowse | Genome page
- Rosa wichuraiana Basye's Thornless Genome v1.0: JBrowse | Genome page
Rubus
- Blackberry
- Rubus argutus Hillquist Genome v1.0: JBrowse | Genome page
- Rubus L. subgenus Rubus Watson Genome v1.0: JBrowse | Genome page
- Black raspberry
- Rubus occidentalis Genome v1.0.a1: JBrowse | Genome page
- Rubus occidentalis Genome v1.1: JBrowse | Genome page
- Rubus occidentalis Genome v3.0: JBrowse | Genome page
- Red raspberry
- Rubus idaeus Autumn Bliss NIAB Genome v1.0: JBrowse | Genome page
- Rubus idaeus Malling Jewel NIAB Genome v1.0: JBrowse | Genome page
- Rubus idaeus Joan J Genome v1.0: JBrowse | Genome page
- Rubus idaeus Anitra Genome v1.0: JBrowse | Genome page
- Other Rubus
- Rubus chingii Hu Genome v1.0: JBrowse | Genome page
Potentilla (or Argentina)
- Potentilla anserina v1.0: JBrowse | Genome page
- Potentilla micrantha v1.0: JBrowse | Genome page
- Argentina anserina v1.0: JBrowse | Genome page
- Argentina lineata v1.0: JBrowse | Genome page
Others
- Crataegus pinnatifida var. major Genome v1.0: JBrowse | Genome page
- Eriobotrya japonica Genome v1.0: JBrowse | Genome page
- Gillenia trifoliata Genome v1.0: JBrowse | Genome page